RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 FBXO31Q5XUX0 539 aaPredicted RBP26.59■■□□□ 1.85
NUP58-212ENST00000481980 VPS8Q8N3P4 1428 aa26.58■■□□□ 1.85
NUP58-212ENST00000481980 LOC105371045A0A1W2PR82 267 aa26.58■■□□□ 1.85
NUP58-212ENST00000481980 WASHC2CQ9Y4E1 1318 aa26.58■■□□□ 1.85
NUP58-212ENST00000481980 ARHGEF5Q12774 1597 aa26.58■■□□□ 1.85
NUP58-212ENST00000481980 LRRC9Q6ZRR7 1453 aa26.57■■□□□ 1.84
NUP58-212ENST00000481980 FAM135AQ9P2D6 1515 aa26.57■■□□□ 1.84
NUP58-212ENST00000481980 TNRQ92752 1358 aa26.57■■□□□ 1.84
NUP58-212ENST00000481980 KDM5DQ9BY66 1539 aa26.56■■□□□ 1.84
NUP58-212ENST00000481980 DNMT1P26358 1616 aaKnown RBP26.55■■□□□ 1.84
NUP58-212ENST00000481980 DISP3Q9P2K9 1392 aa26.55■■□□□ 1.84
NUP58-212ENST00000481980 PZPP20742 1482 aa26.55■■□□□ 1.84
NUP58-212ENST00000481980 KANK4Q5T7N3 995 aaPredicted RBP26.49■■□□□ 1.83
NUP58-212ENST00000481980 UBAP1LF5GYI3 381 aa26.48■■□□□ 1.83
NUP58-212ENST00000481980 MIA2Q96PC5 1412 aa26.48■■□□□ 1.83
NUP58-212ENST00000481980 MAP3K1Q13233 1512 aa26.47■■□□□ 1.83
NUP58-212ENST00000481980 THEMISQ8N1K5 641 aaPredicted RBP26.45■■□□□ 1.82
NUP58-212ENST00000481980 MAST1Q9Y2H9 1570 aa26.45■■□□□ 1.82
NUP58-212ENST00000481980 NLRP1Q9C000 1473 aa26.43■■□□□ 1.82
NUP58-212ENST00000481980 ILDR2Q71H61 639 aa26.43■■□□□ 1.82
NUP58-212ENST00000481980 ANKLE2Q86XL3 938 aa26.42■■□□□ 1.82
NUP58-212ENST00000481980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.42■■□□□ 1.82
NUP58-212ENST00000481980 NEURL4Q96JN8 1562 aa26.41■■□□□ 1.82
NUP58-212ENST00000481980 MYOM3Q5VTT5 1437 aa26.41■■□□□ 1.82
NUP58-212ENST00000481980 RNF17Q9BXT8 1623 aaKnown RBP26.4■■□□□ 1.82
NUP58-212ENST00000481980 POLR1AO95602 1720 aaPredicted RBP26.4■■□□□ 1.82
NUP58-212ENST00000481980 ABCC3O15438 1527 aa26.39■■□□□ 1.81
NUP58-212ENST00000481980 SPATA31D1Q6ZQQ2 1576 aa26.37■■□□□ 1.81
NUP58-212ENST00000481980 UGGT1Q9NYU2 1555 aa26.37■■□□□ 1.81
NUP58-212ENST00000481980 SHANK2Q9UPX8 1470 aa26.36■■□□□ 1.81
NUP58-212ENST00000481980 EIF2AK4Q9P2K8 1649 aaKnown RBP26.36■■□□□ 1.81
NUP58-212ENST00000481980 CPS1P31327 1500 aa26.34■■□□□ 1.81
NUP58-212ENST00000481980 ZC3H13Q5T200 1668 aaKnown RBP26.34■■□□□ 1.81
NUP58-212ENST00000481980 MED14O60244 1454 aa26.33■■□□□ 1.81
NUP58-212ENST00000481980 NPHP4O75161 1426 aaPredicted RBP26.31■■□□□ 1.8
NUP58-212ENST00000481980 DUOX2Q9NRD8 1548 aa26.31■■□□□ 1.8
NUP58-212ENST00000481980 SOCS7O14512 581 aa26.31■■□□□ 1.8
NUP58-212ENST00000481980 DEPDC5O75140 1603 aa26.31■■□□□ 1.8
NUP58-212ENST00000481980 MROH1Q8NDA8 1641 aa26.31■■□□□ 1.8
NUP58-212ENST00000481980 ERVK-7P63135 1459 aa26.3■■□□□ 1.8
NUP58-212ENST00000481980 VWDEQ8N2E2 1590 aa26.29■■□□□ 1.8
NUP58-212ENST00000481980 TOM1O60784 492 aa26.28■■□□□ 1.8
NUP58-212ENST00000481980 APLP2Q06481 763 aa26.27■■□□□ 1.8
NUP58-212ENST00000481980 KIF15Q9NS87 1388 aa26.27■■□□□ 1.8
NUP58-212ENST00000481980 ABCC5O15440 1437 aa26.26■■□□□ 1.79
NUP58-212ENST00000481980 SCAF1Q9H7N4 1312 aaKnown RBP26.24■■□□□ 1.79
NUP58-212ENST00000481980 PIP4K2BP78356 416 aa26.24■■□□□ 1.79
NUP58-212ENST00000481980 RRP7BPQ9NSQ0 103 aa26.24■■□□□ 1.79
NUP58-212ENST00000481980 CEP152O94986 1710 aa26.22■■□□□ 1.79
NUP58-212ENST00000481980 ERBINQ96RT1 1412 aa26.22■■□□□ 1.79
NUP58-212ENST00000481980 IQGAP1P46940 1657 aa26.22■■□□□ 1.79
NUP58-212ENST00000481980 PTPN23Q9H3S7 1636 aa26.21■■□□□ 1.79
NUP58-212ENST00000481980 HSPA1LP34931 641 aa26.21■■□□□ 1.79
NUP58-212ENST00000481980 ARHGAP31Q2M1Z3 1444 aa26.21■■□□□ 1.79
NUP58-212ENST00000481980 PRDM15P57071 1507 aaPredicted RBP26.19■■□□□ 1.78
NUP58-212ENST00000481980 CROCC2H7BZ55 1655 aa26.19■■□□□ 1.78
NUP58-212ENST00000481980 DAPK1P53355 1430 aa26.18■■□□□ 1.78
NUP58-212ENST00000481980 FGD6Q6ZV73 1430 aa26.17■■□□□ 1.78
NUP58-212ENST00000481980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.17■■□□□ 1.782e-6■■□□□ 13.1
NUP58-212ENST00000481980 CFAP65Q6ZU64 1925 aaKnown RBP26.17■■□□□ 1.78
NUP58-212ENST00000481980 UBR1Q8IWV7 1749 aa26.17■■□□□ 1.78
NUP58-212ENST00000481980 SCAF11Q99590 1463 aaKnown RBP26.13■■□□□ 1.77
NUP58-212ENST00000481980 KANK1Q14678 1352 aa26.13■■□□□ 1.77
NUP58-212ENST00000481980 LTKP29376 864 aa26.13■■□□□ 1.77
NUP58-212ENST00000481980 TXNDC2Q86VQ3 553 aa26.12■■□□□ 1.77
NUP58-212ENST00000481980 LRRC7Q96NW7 1537 aa26.12■■□□□ 1.77
NUP58-212ENST00000481980 ARHGAP23Q9P227 1491 aa26.11■■□□□ 1.77
NUP58-212ENST00000481980 ANKRD30AQ9BXX3 1397 aa26.11■■□□□ 1.77
NUP58-212ENST00000481980 SLIT1O75093 1534 aa26.11■■□□□ 1.77
NUP58-212ENST00000481980 CHIC2Q9UKJ5 165 aa26.11■■□□□ 1.77
NUP58-212ENST00000481980 ALKQ9UM73 1620 aa26.1■■□□□ 1.77
NUP58-212ENST00000481980 STRCP1A6NGW2 1772 aa26.1■■□□□ 1.77
NUP58-212ENST00000481980 EID1Q9Y6B2 187 aa26.08■■□□□ 1.77
NUP58-212ENST00000481980 SYNMO15061 1565 aa26.06■■□□□ 1.76
NUP58-212ENST00000481980 LMTK2Q8IWU2 1503 aa26.05■■□□□ 1.76
NUP58-212ENST00000481980 STAG3Q9UJ98 1225 aa26.04■■□□□ 1.76
NUP58-212ENST00000481980 TMEM2Q9UHN6 1383 aa26.04■■□□□ 1.76
NUP58-212ENST00000481980 PIK3C2BO00750 1634 aa26.03■■□□□ 1.76
NUP58-212ENST00000481980 IDI1Q13907 227 aa26.03■■□□□ 1.76
NUP58-212ENST00000481980 MED1Q15648 1581 aaPredicted RBP26.02■■□□□ 1.76
NUP58-212ENST00000481980 ADGRL2O95490 1459 aa25.98■■□□□ 1.75
NUP58-212ENST00000481980 EFCAB6Q5THR3 1501 aa25.98■■□□□ 1.75
NUP58-212ENST00000481980 KDM5AP29375 1690 aaKnown RBP25.97■■□□□ 1.75
NUP58-212ENST00000481980 FAM50AQ14320 339 aaKnown RBP25.97■■□□□ 1.75
NUP58-212ENST00000481980 NOS1P29475 1434 aa25.96■■□□□ 1.75
NUP58-212ENST00000481980 SENP3Q9H4L4 574 aaPredicted RBP25.94■■□□□ 1.74
NUP58-212ENST00000481980 SLC52A1Q9NWF4 448 aa25.93■■□□□ 1.74
NUP58-212ENST00000481980 ANKRD50Q9ULJ7 1429 aa25.91■■□□□ 1.74
NUP58-212ENST00000481980 KCNA6P17658 529 aa25.89■■□□□ 1.74
NUP58-212ENST00000481980 SLC26A8Q96RN1 970 aa25.89■■□□□ 1.74
NUP58-212ENST00000481980 XIRP1Q702N8 1843 aaKnown RBP25.88■■□□□ 1.73
NUP58-212ENST00000481980 TET3O43151 1660 aa25.88■■□□□ 1.73
NUP58-212ENST00000481980 PHF23Q9BUL5 403 aaPredicted RBP25.88■■□□□ 1.73
NUP58-212ENST00000481980 ADGRB3O60242 1522 aa25.88■■□□□ 1.73
NUP58-212ENST00000481980 RPRD2Q5VT52 1461 aaKnown RBP25.87■■□□□ 1.73
NUP58-212ENST00000481980 TMEM94Q12767 1356 aa25.86■■□□□ 1.73
NUP58-212ENST00000481980 PROSER2Q86WR7 435 aaPredicted RBP25.83■■□□□ 1.73
NUP58-212ENST00000481980 FAM135BQ49AJ0 1406 aa25.82■■□□□ 1.72
NUP58-212ENST00000481980 BCANQ96GW7 911 aa25.81■■□□□ 1.72
NUP58-212ENST00000481980 RBM33Q96EV2 1170 aaKnown RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms