RNA–Protein interactions for RNA: ENST00000481461.1

PLOD3-214, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-214ENST00000481461 KDM5DQ9BY66 1539 aa29.51■■■□□ 2.32
PLOD3-214ENST00000481461 LTBP4Q8N2S1 1624 aa29.51■■■□□ 2.31
PLOD3-214ENST00000481461 MAP3K1Q13233 1512 aa29.5■■■□□ 2.31
PLOD3-214ENST00000481461 PLA2R1Q13018 1463 aa29.48■■■□□ 2.31
PLOD3-214ENST00000481461 MYOM3Q5VTT5 1437 aa29.47■■■□□ 2.31
PLOD3-214ENST00000481461 PKD2Q13563 968 aa29.47■■■□□ 2.31
PLOD3-214ENST00000481461 A2ML1A8K2U0 1454 aa29.47■■■□□ 2.31
PLOD3-214ENST00000481461 TNRQ92752 1358 aa29.46■■■□□ 2.31
PLOD3-214ENST00000481461 DNMT1P26358 1616 aaKnown RBP29.45■■■□□ 2.3
PLOD3-214ENST00000481461 ZNF335Q9H4Z2 1342 aaPredicted RBP29.45■■■□□ 2.3
PLOD3-214ENST00000481461 PZPP20742 1482 aa29.44■■■□□ 2.3
PLOD3-214ENST00000481461 APLP2Q06481 763 aa29.44■■■□□ 2.3
PLOD3-214ENST00000481461 MAST1Q9Y2H9 1570 aa29.43■■■□□ 2.3
PLOD3-214ENST00000481461 TCOF1Q13428 1488 aaKnown RBP29.43■■■□□ 2.3
PLOD3-214ENST00000481461 MIA2Q96PC5 1412 aa29.43■■■□□ 2.3
PLOD3-214ENST00000481461 FAM135AQ9P2D6 1515 aa29.42■■■□□ 2.3
PLOD3-214ENST00000481461 RNF17Q9BXT8 1623 aaKnown RBP29.36■■■□□ 2.29
PLOD3-214ENST00000481461 IQSEC2Q5JU85 1478 aa29.35■■■□□ 2.29
PLOD3-214ENST00000481461 EIF2AK4Q9P2K8 1649 aaKnown RBP29.33■■■□□ 2.29
PLOD3-214ENST00000481461 POLR1AO95602 1720 aaPredicted RBP29.33■■■□□ 2.29
PLOD3-214ENST00000481461 ABCC3O15438 1527 aa29.32■■■□□ 2.28
PLOD3-214ENST00000481461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.31■■■□□ 2.28
PLOD3-214ENST00000481461 PTPN23Q9H3S7 1636 aa29.31■■■□□ 2.28
PLOD3-214ENST00000481461 ZC3H13Q5T200 1668 aaKnown RBP29.3■■■□□ 2.28
PLOD3-214ENST00000481461 NLRP1Q9C000 1473 aa29.29■■■□□ 2.28
PLOD3-214ENST00000481461 CEP152O94986 1710 aa29.28■■■□□ 2.28
PLOD3-214ENST00000481461 CFAP65Q6ZU64 1925 aaKnown RBP29.28■■■□□ 2.28
PLOD3-214ENST00000481461 UGGT1Q9NYU2 1555 aa29.28■■■□□ 2.28
PLOD3-214ENST00000481461 THEMISQ8N1K5 641 aaPredicted RBP29.28■■■□□ 2.28
PLOD3-214ENST00000481461 DUOX2Q9NRD8 1548 aa29.28■■■□□ 2.28
PLOD3-214ENST00000481461 MROH1Q8NDA8 1641 aa29.27■■■□□ 2.28
PLOD3-214ENST00000481461 RRP7BPQ9NSQ0 103 aa29.27■■■□□ 2.28
PLOD3-214ENST00000481461 KIF15Q9NS87 1388 aa29.26■■■□□ 2.28
PLOD3-214ENST00000481461 NEURL4Q96JN8 1562 aa29.26■■■□□ 2.28
PLOD3-214ENST00000481461 CROCC2H7BZ55 1655 aa29.26■■■□□ 2.27
PLOD3-214ENST00000481461 UBAP1LF5GYI3 381 aa29.26■■■□□ 2.27
PLOD3-214ENST00000481461 ANKLE2Q86XL3 938 aa29.26■■■□□ 2.27
PLOD3-214ENST00000481461 ABCC5O15440 1437 aa29.26■■■□□ 2.27
PLOD3-214ENST00000481461 DISP3Q9P2K9 1392 aa29.22■■■□□ 2.27
PLOD3-214ENST00000481461 SHANK2Q9UPX8 1470 aa29.22■■■□□ 2.27
PLOD3-214ENST00000481461 SPATA31D1Q6ZQQ2 1576 aa29.22■■■□□ 2.27
PLOD3-214ENST00000481461 DAPK1P53355 1430 aa29.21■■■□□ 2.27
PLOD3-214ENST00000481461 FGD6Q6ZV73 1430 aa29.21■■■□□ 2.27
PLOD3-214ENST00000481461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.21■■■□□ 2.27
PLOD3-214ENST00000481461 ERVK-7P63135 1459 aa29.21■■■□□ 2.27
PLOD3-214ENST00000481461 CHIC2Q9UKJ5 165 aa29.2■■■□□ 2.26
PLOD3-214ENST00000481461 NPHP4O75161 1426 aaPredicted RBP29.16■■■□□ 2.26
PLOD3-214ENST00000481461 ERBINQ96RT1 1412 aa29.16■■■□□ 2.26
PLOD3-214ENST00000481461 PRDM15P57071 1507 aaPredicted RBP29.14■■■□□ 2.25
PLOD3-214ENST00000481461 DEPDC5O75140 1603 aa29.13■■■□□ 2.25
PLOD3-214ENST00000481461 CPS1P31327 1500 aa29.11■■■□□ 2.25
PLOD3-214ENST00000481461 SCAF1Q9H7N4 1312 aaKnown RBP29.11■■■□□ 2.25
PLOD3-214ENST00000481461 MED14O60244 1454 aa29.1■■■□□ 2.25
PLOD3-214ENST00000481461 IQGAP1P46940 1657 aa29.1■■■□□ 2.25
PLOD3-214ENST00000481461 ANKRD30AQ9BXX3 1397 aa29.1■■■□□ 2.25
PLOD3-214ENST00000481461 VWDEQ8N2E2 1590 aa29.09■■■□□ 2.25
PLOD3-214ENST00000481461 UBR1Q8IWV7 1749 aa29.08■■■□□ 2.25
PLOD3-214ENST00000481461 FAM50AQ14320 339 aaKnown RBP29.08■■■□□ 2.25
PLOD3-214ENST00000481461 KANK1Q14678 1352 aa29.08■■■□□ 2.25
PLOD3-214ENST00000481461 PIP4K2BP78356 416 aa29.07■■■□□ 2.24
PLOD3-214ENST00000481461 ARHGAP31Q2M1Z3 1444 aa29.05■■■□□ 2.24
PLOD3-214ENST00000481461 ILDR2Q71H61 639 aa29.04■■■□□ 2.24
PLOD3-214ENST00000481461 TOM1O60784 492 aa29.02■■■□□ 2.24
PLOD3-214ENST00000481461 TXNDC2Q86VQ3 553 aa28.99■■■□□ 2.23
PLOD3-214ENST00000481461 STAG3Q9UJ98 1225 aa28.99■■■□□ 2.23
PLOD3-214ENST00000481461 SCAF11Q99590 1463 aaKnown RBP28.98■■■□□ 2.23
PLOD3-214ENST00000481461 STRCP1A6NGW2 1772 aa28.98■■■□□ 2.23
PLOD3-214ENST00000481461 PIK3C2BO00750 1634 aa28.98■■■□□ 2.23
PLOD3-214ENST00000481461 LTKP29376 864 aa28.97■■■□□ 2.23
PLOD3-214ENST00000481461 ADGRL2O95490 1459 aa28.94■■■□□ 2.22
PLOD3-214ENST00000481461 EID1Q9Y6B2 187 aa28.94■■■□□ 2.22
PLOD3-214ENST00000481461 SLIT1O75093 1534 aa28.94■■■□□ 2.22
PLOD3-214ENST00000481461 ARHGAP23Q9P227 1491 aa28.93■■■□□ 2.22
PLOD3-214ENST00000481461 HSPA1LP34931 641 aa28.93■■■□□ 2.22
PLOD3-214ENST00000481461 LMTK2Q8IWU2 1503 aa28.93■■■□□ 2.22
PLOD3-214ENST00000481461 IDI1Q13907 227 aa28.9■■■□□ 2.22
PLOD3-214ENST00000481461 LRRC7Q96NW7 1537 aa28.89■■■□□ 2.22
PLOD3-214ENST00000481461 ANKRD50Q9ULJ7 1429 aa28.88■■■□□ 2.21
PLOD3-214ENST00000481461 EFCAB6Q5THR3 1501 aa28.88■■■□□ 2.21
PLOD3-214ENST00000481461 SYNMO15061 1565 aa28.88■■■□□ 2.21
PLOD3-214ENST00000481461 TMEM2Q9UHN6 1383 aa28.88■■■□□ 2.21
PLOD3-214ENST00000481461 SENP3Q9H4L4 574 aaPredicted RBP28.87■■■□□ 2.21
PLOD3-214ENST00000481461 ALKQ9UM73 1620 aa28.84■■■□□ 2.21
PLOD3-214ENST00000481461 NOS1P29475 1434 aa28.83■■■□□ 2.21
PLOD3-214ENST00000481461 PPARGC1BQ86YN6 1023 aaKnown RBP28.82■■■□□ 2.2
PLOD3-214ENST00000481461 KDM5AP29375 1690 aaKnown RBP28.8■■■□□ 2.2
PLOD3-214ENST00000481461 SOCS7O14512 581 aa28.8■■■□□ 2.2
PLOD3-214ENST00000481461 ITGAEP38570 1179 aa28.78■■■□□ 2.2
PLOD3-214ENST00000481461 ADGRB3O60242 1522 aa28.78■■■□□ 2.2
PLOD3-214ENST00000481461 SLC26A8Q96RN1 970 aa28.77■■■□□ 2.2
PLOD3-214ENST00000481461 SLC52A1Q9NWF4 448 aa28.77■■■□□ 2.2
PLOD3-214ENST00000481461 BCANQ96GW7 911 aa28.76■■■□□ 2.19
PLOD3-214ENST00000481461 TET3O43151 1660 aa28.75■■■□□ 2.19
PLOD3-214ENST00000481461 RPRD2Q5VT52 1461 aaKnown RBP28.74■■■□□ 2.19
PLOD3-214ENST00000481461 XIRP1Q702N8 1843 aaKnown RBP28.73■■■□□ 2.19
PLOD3-214ENST00000481461 MED1Q15648 1581 aaPredicted RBP28.72■■■□□ 2.19
PLOD3-214ENST00000481461 UNC13BO14795 1591 aa28.71■■■□□ 2.19
PLOD3-214ENST00000481461 MYO5BQ9ULV0 1848 aa28.71■■■□□ 2.19
PLOD3-214ENST00000481461 GCC2Q8IWJ2 1684 aa28.7■■■□□ 2.19
PLOD3-214ENST00000481461 CHGAP10645 457 aaKnown RBP28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms