RNA–Protein interactions for RNA: ENST00000480978.5

ACSS2-213, Transcript of acyl-CoA synthetase short chain family member 2, human

TSL 2

Gene ACSS2, Length 844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSS2-213	ENST00000480978	A2ML1	A8K2U0	1454 aa		33.05	■■■□□ 2.88
ACSS2-213	ENST00000480978	VPS8	Q8N3P4	1428 aa		33.04	■■■□□ 2.88
ACSS2-213	ENST00000480978	WASHC2C	Q9Y4E1	1318 aa		33.02	■■■□□ 2.88
ACSS2-213	ENST00000480978	TSPY4	P0CV99	314 aa		33.02	■■■□□ 2.88
ACSS2-213	ENST00000480978	TSPY10	P0CW01	314 aa		33.02	■■■□□ 2.88
ACSS2-213	ENST00000480978	TNR	Q92752	1358 aa		33.01	■■■□□ 2.88
ACSS2-213	ENST00000480978	DNMT1	P26358	1616 aa	Known RBP	33	■■■□□ 2.87
ACSS2-213	ENST00000480978	LRRC9	Q6ZRR7	1453 aa		32.99	■■■□□ 2.87
ACSS2-213	ENST00000480978	KDM5D	Q9BY66	1539 aa		32.98	■■■□□ 2.87
ACSS2-213	ENST00000480978	ARHGEF5	Q12774	1597 aa		32.98	■■■□□ 2.87
ACSS2-213	ENST00000480978	ILDR2	Q71H61	639 aa		32.98	■■■□□ 2.87
ACSS2-213	ENST00000480978	PZP	P20742	1482 aa		32.97	■■■□□ 2.87
ACSS2-213	ENST00000480978	KANK4	Q5T7N3	995 aa	Predicted RBP	32.96	■■■□□ 2.87
ACSS2-213	ENST00000480978	UBAP1L	F5GYI3	381 aa		32.95	■■■□□ 2.87
ACSS2-213	ENST00000480978	FAM135A	Q9P2D6	1515 aa		32.92	■■■□□ 2.86
ACSS2-213	ENST00000480978	MIA2	Q96PC5	1412 aa		32.89	■■■□□ 2.86
ACSS2-213	ENST00000480978	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.86	■■■□□ 2.85
ACSS2-213	ENST00000480978	ANKLE2	Q86XL3	938 aa		32.84	■■■□□ 2.85
ACSS2-213	ENST00000480978	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.84	■■■□□ 2.85
ACSS2-213	ENST00000480978	NEURL4	Q96JN8	1562 aa		32.83	■■■□□ 2.85
ACSS2-213	ENST00000480978	MAST1	Q9Y2H9	1570 aa		32.81	■■■□□ 2.84
ACSS2-213	ENST00000480978	MAP3K1	Q13233	1512 aa		32.81	■■■□□ 2.84
ACSS2-213	ENST00000480978	NLRP1	Q9C000	1473 aa		32.8	■■■□□ 2.84
ACSS2-213	ENST00000480978	SPATA31D1	Q6ZQQ2	1576 aa		32.8	■■■□□ 2.84
ACSS2-213	ENST00000480978	MYOM3	Q5VTT5	1437 aa		32.8	■■■□□ 2.84
ACSS2-213	ENST00000480978	POLR1A	O95602	1720 aa	Predicted RBP	32.79	■■■□□ 2.84
ACSS2-213	ENST00000480978	UGGT1	Q9NYU2	1555 aa		32.78	■■■□□ 2.84
ACSS2-213	ENST00000480978	RNF17	Q9BXT8	1623 aa	Known RBP	32.77	■■■□□ 2.84
ACSS2-213	ENST00000480978	ABCC3	O15438	1527 aa		32.77	■■■□□ 2.84
ACSS2-213	ENST00000480978	SHANK2	Q9UPX8	1470 aa		32.75	■■■□□ 2.83
ACSS2-213	ENST00000480978	SOCS7	O14512	581 aa		32.73	■■■□□ 2.83
ACSS2-213	ENST00000480978	NPHP4	O75161	1426 aa	Predicted RBP	32.7	■■■□□ 2.83
ACSS2-213	ENST00000480978	CPS1	P31327	1500 aa		32.7	■■■□□ 2.83
ACSS2-213	ENST00000480978	MROH1	Q8NDA8	1641 aa		32.69	■■■□□ 2.82
ACSS2-213	ENST00000480978	PIP4K2B	P78356	416 aa		32.69	■■■□□ 2.82
ACSS2-213	ENST00000480978	APLP2	Q06481	763 aa		32.69	■■■□□ 2.82
ACSS2-213	ENST00000480978	SCAF1	Q9H7N4	1312 aa	Known RBP	32.69	■■■□□ 2.82
ACSS2-213	ENST00000480978	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.69	■■■□□ 2.82
ACSS2-213	ENST00000480978	MED14	O60244	1454 aa		32.68	■■■□□ 2.82
ACSS2-213	ENST00000480978	ERVK-7	P63135	1459 aa		32.67	■■■□□ 2.82
ACSS2-213	ENST00000480978	ZC3H13	Q5T200	1668 aa	Known RBP	32.67	■■■□□ 2.82
ACSS2-213	ENST00000480978	VWDE	Q8N2E2	1590 aa		32.66	■■■□□ 2.82
ACSS2-213	ENST00000480978	TOM1	O60784	492 aa		32.65	■■■□□ 2.82
ACSS2-213	ENST00000480978	RRP7BP	Q9NSQ0	103 aa		32.65	■■■□□ 2.82
ACSS2-213	ENST00000480978	DUOX2	Q9NRD8	1548 aa		32.65	■■■□□ 2.82
ACSS2-213	ENST00000480978	DEPDC5	O75140	1603 aa		32.65	■■■□□ 2.82
ACSS2-213	ENST00000480978	ABCC5	O15440	1437 aa		32.63	■■■□□ 2.81
ACSS2-213	ENST00000480978	HSPA1L	P34931	641 aa		32.63	■■■□□ 2.81
ACSS2-213	ENST00000480978	KIF15	Q9NS87	1388 aa		32.62	■■■□□ 2.81
ACSS2-213	ENST00000480978	CEP152	O94986	1710 aa		32.62	■■■□□ 2.81
ACSS2-213	ENST00000480978	CFAP65	Q6ZU64	1925 aa	Known RBP	32.59	■■■□□ 2.81
ACSS2-213	ENST00000480978	IQGAP1	P46940	1657 aa		32.57	■■■□□ 2.8
ACSS2-213	ENST00000480978	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.57	■■■□□ 2.8	5e-9	■■■□□ 16.9
ACSS2-213	ENST00000480978	PTPN23	Q9H3S7	1636 aa		32.55	■■■□□ 2.8
ACSS2-213	ENST00000480978	ERBIN	Q96RT1	1412 aa		32.53	■■■□□ 2.8
ACSS2-213	ENST00000480978	DAPK1	P53355	1430 aa		32.52	■■■□□ 2.8
ACSS2-213	ENST00000480978	ARHGAP31	Q2M1Z3	1444 aa		32.51	■■■□□ 2.8
ACSS2-213	ENST00000480978	CROCC2	H7BZ55	1655 aa		32.51	■■■□□ 2.79
ACSS2-213	ENST00000480978	LTK	P29376	864 aa		32.51	■■■□□ 2.79
ACSS2-213	ENST00000480978	CHIC2	Q9UKJ5	165 aa		32.51	■■■□□ 2.79
ACSS2-213	ENST00000480978	UBR1	Q8IWV7	1749 aa		32.51	■■■□□ 2.79
ACSS2-213	ENST00000480978	PRDM15	P57071	1507 aa	Predicted RBP	32.51	■■■□□ 2.79
ACSS2-213	ENST00000480978	FGD6	Q6ZV73	1430 aa		32.5	■■■□□ 2.79
ACSS2-213	ENST00000480978	STRCP1	A6NGW2	1772 aa		32.49	■■■□□ 2.79
ACSS2-213	ENST00000480978	TXNDC2	Q86VQ3	553 aa		32.48	■■■□□ 2.79
ACSS2-213	ENST00000480978	ALK	Q9UM73	1620 aa		32.48	■■■□□ 2.79
ACSS2-213	ENST00000480978	LRRC7	Q96NW7	1537 aa		32.47	■■■□□ 2.79
ACSS2-213	ENST00000480978	SCAF11	Q99590	1463 aa	Known RBP	32.47	■■■□□ 2.79
ACSS2-213	ENST00000480978	ARHGAP23	Q9P227	1491 aa		32.43	■■■□□ 2.78
ACSS2-213	ENST00000480978	KANK1	Q14678	1352 aa		32.43	■■■□□ 2.78
ACSS2-213	ENST00000480978	SLIT1	O75093	1534 aa		32.41	■■■□□ 2.78
ACSS2-213	ENST00000480978	ANKRD30A	Q9BXX3	1397 aa		32.41	■■■□□ 2.78
ACSS2-213	ENST00000480978	SENP3	Q9H4L4	574 aa	Predicted RBP	32.39	■■■□□ 2.78
ACSS2-213	ENST00000480978	EID1	Q9Y6B2	187 aa		32.39	■■■□□ 2.78
ACSS2-213	ENST00000480978	MED1	Q15648	1581 aa	Predicted RBP	32.37	■■■□□ 2.77
ACSS2-213	ENST00000480978	STAG3	Q9UJ98	1225 aa		32.37	■■■□□ 2.77
ACSS2-213	ENST00000480978	IDI1	Q13907	227 aa		32.36	■■■□□ 2.77
ACSS2-213	ENST00000480978	PIK3C2B	O00750	1634 aa		32.36	■■■□□ 2.77
ACSS2-213	ENST00000480978	TMEM2	Q9UHN6	1383 aa		32.34	■■■□□ 2.77
ACSS2-213	ENST00000480978	SYNM	O15061	1565 aa		32.33	■■■□□ 2.77
ACSS2-213	ENST00000480978	LMTK2	Q8IWU2	1503 aa		32.32	■■■□□ 2.76
ACSS2-213	ENST00000480978	FAM50A	Q14320	339 aa	Known RBP	32.3	■■■□□ 2.76
ACSS2-213	ENST00000480978	EFCAB6	Q5THR3	1501 aa		32.26	■■■□□ 2.76
ACSS2-213	ENST00000480978	ADGRL2	O95490	1459 aa		32.24	■■■□□ 2.75
ACSS2-213	ENST00000480978	NOS1	P29475	1434 aa		32.24	■■■□□ 2.75
ACSS2-213	ENST00000480978	SLC26A8	Q96RN1	970 aa		32.22	■■■□□ 2.75
ACSS2-213	ENST00000480978	PHF23	Q9BUL5	403 aa	Predicted RBP	32.2	■■■□□ 2.75
ACSS2-213	ENST00000480978	XIRP1	Q702N8	1843 aa	Known RBP	32.19	■■■□□ 2.74
ACSS2-213	ENST00000480978	KDM5A	P29375	1690 aa	Known RBP	32.19	■■■□□ 2.74
ACSS2-213	ENST00000480978	SLC52A1	Q9NWF4	448 aa		32.18	■■■□□ 2.74
ACSS2-213	ENST00000480978	ANKRD50	Q9ULJ7	1429 aa		32.17	■■■□□ 2.74
ACSS2-213	ENST00000480978	KCNA6	P17658	529 aa		32.17	■■■□□ 2.74
ACSS2-213	ENST00000480978	TET3	O43151	1660 aa		32.16	■■■□□ 2.74
ACSS2-213	ENST00000480978	TMEM94	Q12767	1356 aa		32.16	■■■□□ 2.74
ACSS2-213	ENST00000480978	RBM33	Q96EV2	1170 aa	Known RBP	32.15	■■■□□ 2.74
ACSS2-213	ENST00000480978	ADGRB3	O60242	1522 aa		32.14	■■■□□ 2.74
ACSS2-213	ENST00000480978	PROSER2	Q86WR7	435 aa	Predicted RBP	32.12	■■■□□ 2.73
ACSS2-213	ENST00000480978	BCAN	Q96GW7	911 aa		32.11	■■■□□ 2.73
ACSS2-213	ENST00000480978	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.09	■■■□□ 2.73
ACSS2-213	ENST00000480978	RPRD2	Q5VT52	1461 aa	Known RBP	32.08	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms