RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 DAPK1P53355 1430 aa23.3■■□□□ 1.32
TDP2-205ENST00000480495 DUOX2Q9NRD8 1548 aa23.28■■□□□ 1.32
TDP2-205ENST00000480495 ILDR1Q86SU0 546 aaPredicted RBP23.28■■□□□ 1.32
TDP2-205ENST00000480495 DNMT1P26358 1616 aaKnown RBP23.28■■□□□ 1.32
TDP2-205ENST00000480495 EIF2AK4Q9P2K8 1649 aaKnown RBP23.28■■□□□ 1.32
TDP2-205ENST00000480495 KIF15Q9NS87 1388 aa23.27■■□□□ 1.32
TDP2-205ENST00000480495 CROCC2H7BZ55 1655 aa23.27■■□□□ 1.32
TDP2-205ENST00000480495 RNF17Q9BXT8 1623 aaKnown RBP23.26■■□□□ 1.31
TDP2-205ENST00000480495 PZPP20742 1482 aa23.25■■□□□ 1.31
TDP2-205ENST00000480495 RRP7BPQ9NSQ0 103 aa23.24■■□□□ 1.31
TDP2-205ENST00000480495 STRCQ7RTU9 1775 aa23.24■■□□□ 1.31
TDP2-205ENST00000480495 NCOA1Q15788 1441 aa23.23■■□□□ 1.31
TDP2-205ENST00000480495 ERBINQ96RT1 1412 aa23.23■■□□□ 1.31
TDP2-205ENST00000480495 MYO3AQ8NEV4 1616 aa23.22■■□□□ 1.31
TDP2-205ENST00000480495 ANKRD30AQ9BXX3 1397 aa23.22■■□□□ 1.31
TDP2-205ENST00000480495 FAM50AQ14320 339 aaKnown RBP23.21■■□□□ 1.31
TDP2-205ENST00000480495 PTPRTO14522 1441 aa23.21■■□□□ 1.31
TDP2-205ENST00000480495 ZNF142P52746 1687 aaPredicted RBP23.2■■□□□ 1.3
TDP2-205ENST00000480495 TNRQ92752 1358 aa23.2■■□□□ 1.3
TDP2-205ENST00000480495 FBXO31Q5XUX0 539 aaPredicted RBP23.2■■□□□ 1.3
TDP2-205ENST00000480495 CEP170BQ9Y4F5 1589 aaPredicted RBP23.19■■□□□ 1.3
TDP2-205ENST00000480495 ABCC3O15438 1527 aa23.19■■□□□ 1.3
TDP2-205ENST00000480495 CHIC2Q9UKJ5 165 aa23.19■■□□□ 1.3
TDP2-205ENST00000480495 ZC3H13Q5T200 1668 aaKnown RBP23.19■■□□□ 1.3
TDP2-205ENST00000480495 CAMSAP1Q5T5Y3 1602 aa23.19■■□□□ 1.3
TDP2-205ENST00000480495 A2ML1A8K2U0 1454 aa23.17■■□□□ 1.3
TDP2-205ENST00000480495 MROH1Q8NDA8 1641 aa23.17■■□□□ 1.3
TDP2-205ENST00000480495 FBXO41Q8TF61 875 aa23.16■■□□□ 1.3
TDP2-205ENST00000480495 PLA2R1Q13018 1463 aa23.16■■□□□ 1.3
TDP2-205ENST00000480495 ADGRL2O95490 1459 aa23.15■■□□□ 1.3
TDP2-205ENST00000480495 PKD2Q13563 968 aa23.14■■□□□ 1.29
TDP2-205ENST00000480495 PRDM15P57071 1507 aaPredicted RBP23.13■■□□□ 1.29
TDP2-205ENST00000480495 NLRP1Q9C000 1473 aa23.11■■□□□ 1.29
TDP2-205ENST00000480495 CERKQ8TCT0 537 aa23.11■■□□□ 1.29
TDP2-205ENST00000480495 NCKAP5LQ9HCH0 1330 aa23.1■■□□□ 1.29
TDP2-205ENST00000480495 KANK1Q14678 1352 aa23.1■■□□□ 1.29
TDP2-205ENST00000480495 DEPDC5O75140 1603 aa23.08■■□□□ 1.29
TDP2-205ENST00000480495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.08■■□□□ 1.29
TDP2-205ENST00000480495 SPATA31D1Q6ZQQ2 1576 aa23.08■■□□□ 1.29
TDP2-205ENST00000480495 ARHGAP31Q2M1Z3 1444 aa23.08■■□□□ 1.28
TDP2-205ENST00000480495 ERVK-7P63135 1459 aa23.07■■□□□ 1.28
TDP2-205ENST00000480495 CEP152O94986 1710 aa23.07■■□□□ 1.28
TDP2-205ENST00000480495 THEMISQ8N1K5 641 aaPredicted RBP23.06■■□□□ 1.28
TDP2-205ENST00000480495 PPARGC1BQ86YN6 1023 aaKnown RBP23.05■■□□□ 1.28
TDP2-205ENST00000480495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.04■■□□□ 1.28
TDP2-205ENST00000480495 ANKRD50Q9ULJ7 1429 aa23.04■■□□□ 1.28
TDP2-205ENST00000480495 UGGT1Q9NYU2 1555 aa23.03■■□□□ 1.28
TDP2-205ENST00000480495 LMTK2Q8IWU2 1503 aa23.02■■□□□ 1.28
TDP2-205ENST00000480495 ROCK1Q13464 1354 aa23.01■■□□□ 1.27
TDP2-205ENST00000480495 VWDEQ8N2E2 1590 aa23.01■■□□□ 1.27
TDP2-205ENST00000480495 ANKLE2Q86XL3 938 aa22.99■■□□□ 1.27
TDP2-205ENST00000480495 LTBP4Q8N2S1 1624 aa22.97■■□□□ 1.27
TDP2-205ENST00000480495 POLR1AO95602 1720 aaPredicted RBP22.94■■□□□ 1.26
TDP2-205ENST00000480495 ITGAEP38570 1179 aa22.93■■□□□ 1.26
TDP2-205ENST00000480495 NEURL4Q96JN8 1562 aa22.93■■□□□ 1.26
TDP2-205ENST00000480495 EFCAB6Q5THR3 1501 aa22.92■■□□□ 1.26
TDP2-205ENST00000480495 ZNF335Q9H4Z2 1342 aaPredicted RBP22.92■■□□□ 1.26
TDP2-205ENST00000480495 CFAP65Q6ZU64 1925 aaKnown RBP22.92■■□□□ 1.26
TDP2-205ENST00000480495 IQSEC2Q5JU85 1478 aa22.92■■□□□ 1.26
TDP2-205ENST00000480495 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
TDP2-205ENST00000480495 MED14O60244 1454 aa22.91■■□□□ 1.26
TDP2-205ENST00000480495 NPHP4O75161 1426 aaPredicted RBP22.89■■□□□ 1.25
TDP2-205ENST00000480495 RPRD2Q5VT52 1461 aaKnown RBP22.88■■□□□ 1.25
TDP2-205ENST00000480495 NOS1P29475 1434 aa22.88■■□□□ 1.25
TDP2-205ENST00000480495 UBR1Q8IWV7 1749 aa22.88■■□□□ 1.25
TDP2-205ENST00000480495 UNC13BO14795 1591 aa22.87■■□□□ 1.25
TDP2-205ENST00000480495 IDI1Q13907 227 aa22.85■■□□□ 1.25
TDP2-205ENST00000480495 STAG3Q9UJ98 1225 aa22.85■■□□□ 1.25
TDP2-205ENST00000480495 ARHGAP23Q9P227 1491 aa22.85■■□□□ 1.25
TDP2-205ENST00000480495 SLIT1O75093 1534 aa22.84■■□□□ 1.25
TDP2-205ENST00000480495 SLC52A1Q9NWF4 448 aa22.84■■□□□ 1.25
TDP2-205ENST00000480495 TET3O43151 1660 aa22.84■■□□□ 1.25
TDP2-205ENST00000480495 SYNMO15061 1565 aa22.83■■□□□ 1.25
TDP2-205ENST00000480495 PIK3C2BO00750 1634 aa22.82■■□□□ 1.24
TDP2-205ENST00000480495 SCAF11Q99590 1463 aaKnown RBP22.82■■□□□ 1.24
TDP2-205ENST00000480495 EID1Q9Y6B2 187 aa22.82■■□□□ 1.24
TDP2-205ENST00000480495 TXNDC2Q86VQ3 553 aa22.81■■□□□ 1.24
TDP2-205ENST00000480495 KDM5AP29375 1690 aaKnown RBP22.81■■□□□ 1.24
TDP2-205ENST00000480495 IQGAP1P46940 1657 aa22.81■■□□□ 1.24
TDP2-205ENST00000480495 TMEM2Q9UHN6 1383 aa22.8■■□□□ 1.24
TDP2-205ENST00000480495 NUP155O75694 1391 aa22.79■■□□□ 1.24
TDP2-205ENST00000480495 CPS1P31327 1500 aa22.79■■□□□ 1.24
TDP2-205ENST00000480495 LTKP29376 864 aa22.79■■□□□ 1.24
TDP2-205ENST00000480495 IQGAP3Q86VI3 1631 aa22.79■■□□□ 1.24
TDP2-205ENST00000480495 GCC2Q8IWJ2 1684 aa22.78■■□□□ 1.24
TDP2-205ENST00000480495 ADGRB3O60242 1522 aa22.76■■□□□ 1.23
TDP2-205ENST00000480495 NAIPQ13075 1403 aa22.73■■□□□ 1.23
TDP2-205ENST00000480495 E9PCH4 1651 aa22.71■■□□□ 1.23
TDP2-205ENST00000480495 UBAP1LF5GYI3 381 aa22.71■■□□□ 1.23
TDP2-205ENST00000480495 HFM1A2PYH4 1435 aa22.67■■□□□ 1.22
TDP2-205ENST00000480495 HDGFP51858 240 aaKnown RBP22.67■■□□□ 1.22
TDP2-205ENST00000480495 TMEM131LA2VDJ0 1609 aa22.64■■□□□ 1.22
TDP2-205ENST00000480495 ZFYVE9O95405 1425 aa22.64■■□□□ 1.21
TDP2-205ENST00000480495 TOM1O60784 492 aa22.63■■□□□ 1.21
TDP2-205ENST00000480495 CHGAP10645 457 aaKnown RBP22.63■■□□□ 1.21
TDP2-205ENST00000480495 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.62■■□□□ 1.21
TDP2-205ENST00000480495 RIMS2Q9UQ26 1411 aa22.62■■□□□ 1.21
TDP2-205ENST00000480495 LRRC7Q96NW7 1537 aa22.62■■□□□ 1.21
TDP2-205ENST00000480495 STRCP1A6NGW2 1772 aa22.61■■□□□ 1.21
TDP2-205ENST00000480495 PPP1R15AO75807 674 aaPredicted RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms