RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 RNF17Q9BXT8 1623 aaKnown RBP18.62■□□□□ 0.57
SIK3-209ENST00000480222 PRDM15P57071 1507 aaPredicted RBP18.61■□□□□ 0.57
SIK3-209ENST00000480222 CLSPNQ9HAW4 1339 aa18.61■□□□□ 0.57
SIK3-209ENST00000480222 IQGAP3Q86VI3 1631 aa18.6■□□□□ 0.57
SIK3-209ENST00000480222 YEATS2Q9ULM3 1422 aa18.59■□□□□ 0.57
SIK3-209ENST00000480222 CCER1Q8TC90 406 aaPredicted RBP18.59■□□□□ 0.57
SIK3-209ENST00000480222 ATP10AO60312 1499 aa18.58■□□□□ 0.56
SIK3-209ENST00000480222 PZPP20742 1482 aa18.57■□□□□ 0.56
SIK3-209ENST00000480222 MROH1Q8NDA8 1641 aa18.56■□□□□ 0.56
SIK3-209ENST00000480222 AGLP35573 1532 aa18.56■□□□□ 0.56
SIK3-209ENST00000480222 FAM135AQ9P2D6 1515 aa18.55■□□□□ 0.56
SIK3-209ENST00000480222 VWDEQ8N2E2 1590 aa18.55■□□□□ 0.56
SIK3-209ENST00000480222 TRIM52Q96A61 297 aa18.54■□□□□ 0.56
SIK3-209ENST00000480222 NUP155O75694 1391 aa18.53■□□□□ 0.56
SIK3-209ENST00000480222 ZC3H13Q5T200 1668 aaKnown RBP18.52■□□□□ 0.56
SIK3-209ENST00000480222 TET3O43151 1660 aa18.5■□□□□ 0.55
SIK3-209ENST00000480222 LMTK2Q8IWU2 1503 aa18.49■□□□□ 0.55
SIK3-209ENST00000480222 KANK1Q14678 1352 aa18.49■□□□□ 0.55
SIK3-209ENST00000480222 MPHOSPH9Q99550 1183 aa18.48■□□□□ 0.55
SIK3-209ENST00000480222 KIF3BO15066 747 aa18.47■□□□□ 0.55
SIK3-209ENST00000480222 SLC4A1APQ9BWU0 796 aaKnown RBP18.47■□□□□ 0.55
SIK3-209ENST00000480222 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.55
SIK3-209ENST00000480222 SIGLEC1Q9BZZ2 1709 aa18.46■□□□□ 0.55
SIK3-209ENST00000480222 EFCAB6Q5THR3 1501 aa18.45■□□□□ 0.54
SIK3-209ENST00000480222 CEP152O94986 1710 aa18.45■□□□□ 0.54
SIK3-209ENST00000480222 ABCC3O15438 1527 aa18.44■□□□□ 0.54
SIK3-209ENST00000480222 E9PCH4 1651 aa18.42■□□□□ 0.54
SIK3-209ENST00000480222 CAMSAP1Q5T5Y3 1602 aa18.41■□□□□ 0.54
SIK3-209ENST00000480222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.41■□□□□ 0.54
SIK3-209ENST00000480222 RPRD2Q5VT52 1461 aaKnown RBP18.39■□□□□ 0.54
SIK3-209ENST00000480222 PKD2Q13563 968 aa18.38■□□□□ 0.53
SIK3-209ENST00000480222 ANKRD30BQ9BXX2 1392 aa18.38■□□□□ 0.53
SIK3-209ENST00000480222 SPHKAPQ2M3C7 1700 aa18.37■□□□□ 0.53
SIK3-209ENST00000480222 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
SIK3-209ENST00000480222 TRPM2O94759 1503 aa18.36■□□□□ 0.53
SIK3-209ENST00000480222 ARHGAP31Q2M1Z3 1444 aa18.34■□□□□ 0.53
SIK3-209ENST00000480222 GGT6Q6P531 493 aa18.34■□□□□ 0.53
SIK3-209ENST00000480222 CLTCQ00610 1675 aaKnown RBP18.33■□□□□ 0.52
SIK3-209ENST00000480222 MROH2AA6NES4 1674 aa18.32■□□□□ 0.52
SIK3-209ENST00000480222 ILDR1Q86SU0 546 aaPredicted RBP18.32■□□□□ 0.52
SIK3-209ENST00000480222 PTPRTO14522 1441 aa18.32■□□□□ 0.52
SIK3-209ENST00000480222 WASHC2CQ9Y4E1 1318 aa18.31■□□□□ 0.52
SIK3-209ENST00000480222 NPATQ14207 1427 aa18.31■□□□□ 0.52
SIK3-209ENST00000480222 CNTLNQ9NXG0 1405 aa18.31■□□□□ 0.52
SIK3-209ENST00000480222 FOXD1Q16676 465 aa18.3■□□□□ 0.52
SIK3-209ENST00000480222 TIMELESSQ9UNS1 1208 aa18.3■□□□□ 0.52
SIK3-209ENST00000480222 CCDC144AA2RUR9 1427 aa18.3■□□□□ 0.52
SIK3-209ENST00000480222 PLA2R1Q13018 1463 aa18.29■□□□□ 0.52
SIK3-209ENST00000480222 FER1L4A9Z1Z3 1794 aa18.28■□□□□ 0.52
SIK3-209ENST00000480222 ARID4BQ4LE39 1312 aaPredicted RBP18.27■□□□□ 0.52
SIK3-209ENST00000480222 PREX1Q8TCU6 1659 aa18.27■□□□□ 0.52
SIK3-209ENST00000480222 NEURL4Q96JN8 1562 aa18.26■□□□□ 0.51
SIK3-209ENST00000480222 TONSLQ96HA7 1378 aa18.26■□□□□ 0.51
SIK3-209ENST00000480222 NOS1P29475 1434 aa18.24■□□□□ 0.51
SIK3-209ENST00000480222 CLTCL1P53675 1640 aa18.24■□□□□ 0.51
SIK3-209ENST00000480222 SIN3AQ96ST3 1273 aa18.24■□□□□ 0.51
SIK3-209ENST00000480222 PIK3C2BO00750 1634 aa18.23■□□□□ 0.51
SIK3-209ENST00000480222 SPATA31D1Q6ZQQ2 1576 aa18.22■□□□□ 0.51
SIK3-209ENST00000480222 SYNMO15061 1565 aa18.21■□□□□ 0.51
SIK3-209ENST00000480222 ERVK-7P63135 1459 aa18.21■□□□□ 0.51
SIK3-209ENST00000480222 NEUROD1Q13562 356 aa18.21■□□□□ 0.51
SIK3-209ENST00000480222 ESF1Q9H501 851 aaKnown RBP18.21■□□□□ 0.51
SIK3-209ENST00000480222 ADAMTSL3P82987 1691 aa18.2■□□□□ 0.5
SIK3-209ENST00000480222 MLECQ14165 292 aa18.2■□□□□ 0.5
SIK3-209ENST00000480222 KIF1BO60333 1816 aa18.19■□□□□ 0.5
SIK3-209ENST00000480222 MADDQ8WXG6 1647 aa18.18■□□□□ 0.5
SIK3-209ENST00000480222 ADGRB3O60242 1522 aa18.18■□□□□ 0.5
SIK3-209ENST00000480222 C3P01024 1663 aa18.17■□□□□ 0.5
SIK3-209ENST00000480222 UGGT1Q9NYU2 1555 aa18.17■□□□□ 0.5
SIK3-209ENST00000480222 ZMYM3Q14202 1370 aa18.16■□□□□ 0.5
SIK3-209ENST00000480222 SPATA31E1Q6ZUB1 1445 aa18.15■□□□□ 0.5
SIK3-209ENST00000480222 RIMS1Q86UR5 1692 aaKnown RBP18.15■□□□□ 0.5
SIK3-209ENST00000480222 CFAP65Q6ZU64 1925 aaKnown RBP18.14■□□□□ 0.49
SIK3-209ENST00000480222 SLC52A1Q9NWF4 448 aa18.11■□□□□ 0.49
SIK3-209ENST00000480222 KDM5AP29375 1690 aaKnown RBP18.11■□□□□ 0.49
SIK3-209ENST00000480222 IFT172Q9UG01 1749 aa18.11■□□□□ 0.49
SIK3-209ENST00000480222 L3MBTL2Q969R5 705 aa18.09■□□□□ 0.49
SIK3-209ENST00000480222 TMEM131LA2VDJ0 1609 aa18.08■□□□□ 0.48
SIK3-209ENST00000480222 PTPRMP28827 1452 aa18.07■□□□□ 0.48
SIK3-209ENST00000480222 UHRF1BP1Q6BDS2 1440 aa18.07■□□□□ 0.48
SIK3-209ENST00000480222 TNRQ92752 1358 aa18.07■□□□□ 0.48
SIK3-209ENST00000480222 MYOM2P54296 1465 aa18.07■□□□□ 0.48
SIK3-209ENST00000480222 NLRP1Q9C000 1473 aa18.07■□□□□ 0.48
SIK3-209ENST00000480222 PPP1R15AO75807 674 aaPredicted RBP18.06■□□□□ 0.48
SIK3-209ENST00000480222 PPLO60437 1756 aa18.05■□□□□ 0.48
SIK3-209ENST00000480222 MYO3AQ8NEV4 1616 aa18.05■□□□□ 0.48
SIK3-209ENST00000480222 FBXO31Q5XUX0 539 aaPredicted RBP18.04■□□□□ 0.48
SIK3-209ENST00000480222 STAC3Q96MF2 364 aa18.04■□□□□ 0.48
SIK3-209ENST00000480222 MYO5BQ9ULV0 1848 aa18.02■□□□□ 0.48
SIK3-209ENST00000480222 NEXMIFQ5QGS0 1516 aa18.02■□□□□ 0.47
SIK3-209ENST00000480222 PRAG1Q86YV5 1406 aa18.01■□□□□ 0.47
SIK3-209ENST00000480222 RALGAPBQ86X10 1494 aa18.01■□□□□ 0.47
SIK3-209ENST00000480222 UBR1Q8IWV7 1749 aa18.01■□□□□ 0.47
SIK3-209ENST00000480222 RPGRIP1LQ68CZ1 1315 aa18■□□□□ 0.47
SIK3-209ENST00000480222 ZNF142P52746 1687 aaPredicted RBP18■□□□□ 0.47
SIK3-209ENST00000480222 IDI1Q13907 227 aa18■□□□□ 0.47
SIK3-209ENST00000480222 TRPM1Q7Z4N2 1603 aa18■□□□□ 0.47
SIK3-209ENST00000480222 NRXN1Q9ULB1 1477 aa17.99■□□□□ 0.47
SIK3-209ENST00000480222 KIAA1210Q9ULL0 1709 aa17.98■□□□□ 0.47
SIK3-209ENST00000480222 RGL3Q3MIN7 710 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms