RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 ADAMTS12P58397 1594 aa17.84■□□□□ 0.45
C9orf78-205ENST00000480023 NUP153P49790 1475 aaKnown RBP17.84■□□□□ 0.45
C9orf78-205ENST00000480023 KIAA0586Q9BVV6 1533 aa17.83■□□□□ 0.45
C9orf78-205ENST00000480023 KDM5DQ9BY66 1539 aa17.83■□□□□ 0.44
C9orf78-205ENST00000480023 ST20-MTHFSA0A0A6YYL1 179 aa17.83■□□□□ 0.44
C9orf78-205ENST00000480023 FRAT1Q92837 279 aaPredicted RBP17.83■□□□□ 0.44
C9orf78-205ENST00000480023 CEP170Q5SW79 1584 aa17.82■□□□□ 0.44
C9orf78-205ENST00000480023 CRBNQ96SW2 442 aa17.81■□□□□ 0.44
C9orf78-205ENST00000480023 CDCA7LQ96GN5 454 aa17.81■□□□□ 0.44
C9orf78-205ENST00000480023 RAPGEF6Q8TEU7 1601 aa17.8■□□□□ 0.44
C9orf78-205ENST00000480023 ZNF608Q9ULD9 1512 aaPredicted RBP17.79■□□□□ 0.44
C9orf78-205ENST00000480023 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
C9orf78-205ENST00000480023 KIAA0556O60303 1618 aa17.79■□□□□ 0.44
C9orf78-205ENST00000480023 ADCY10Q96PN6 1610 aa17.79■□□□□ 0.44
C9orf78-205ENST00000480023 ANKRD50Q9ULJ7 1429 aa17.79■□□□□ 0.44
C9orf78-205ENST00000480023 PER1O15534 1290 aaPredicted RBP17.78■□□□□ 0.44
C9orf78-205ENST00000480023 CENPQQ7L2Z9 268 aaPredicted RBP17.78■□□□□ 0.44
C9orf78-205ENST00000480023 TROQ12816 1431 aaPredicted RBP17.77■□□□□ 0.44
C9orf78-205ENST00000480023 PLIN1O60240 522 aa17.77■□□□□ 0.44
C9orf78-205ENST00000480023 GPATCH8Q9UKJ3 1502 aaKnown RBP17.77■□□□□ 0.43
C9orf78-205ENST00000480023 FAM161AQ3B820 660 aa17.77■□□□□ 0.43
C9orf78-205ENST00000480023 DAXXQ9UER7 740 aaPredicted RBP17.76■□□□□ 0.43
C9orf78-205ENST00000480023 C8orf34Q49A92 452 aa17.75■□□□□ 0.43
C9orf78-205ENST00000480023 FAM43AQ8N2R8 423 aa17.75■□□□□ 0.43
C9orf78-205ENST00000480023 SHANK2Q9UPX8 1470 aa17.75■□□□□ 0.43
C9orf78-205ENST00000480023 DISP1Q96F81 1524 aa17.75■□□□□ 0.43
C9orf78-205ENST00000480023 TRPM1Q7Z4N2 1603 aa17.75■□□□□ 0.43
C9orf78-205ENST00000480023 SKAP1Q86WV1 359 aa17.75■□□□□ 0.43
C9orf78-205ENST00000480023 PTPRGP23470 1445 aa17.74■□□□□ 0.43
C9orf78-205ENST00000480023 ARID3CA6NKF2 412 aa17.74■□□□□ 0.43
C9orf78-205ENST00000480023 LAMC1P11047 1609 aa17.73■□□□□ 0.43
C9orf78-205ENST00000480023 RSPH6AQ9H0K4 717 aa17.73■□□□□ 0.43
C9orf78-205ENST00000480023 CFDP1Q9UEE9 299 aaPredicted RBP17.73■□□□□ 0.43
C9orf78-205ENST00000480023 COL17A1Q9UMD9 1497 aaPredicted RBP17.73■□□□□ 0.43
C9orf78-205ENST00000480023 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
C9orf78-205ENST00000480023 SLC4A3P48751 1232 aa17.72■□□□□ 0.43
C9orf78-205ENST00000480023 GPRASP1Q5JY77 1395 aa17.71■□□□□ 0.43
C9orf78-205ENST00000480023 NUP155O75694 1391 aa17.7■□□□□ 0.42
C9orf78-205ENST00000480023 PRG4Q92954 1404 aaPredicted RBP17.7■□□□□ 0.42
C9orf78-205ENST00000480023 PRAG1Q86YV5 1406 aa17.69■□□□□ 0.42
C9orf78-205ENST00000480023 C20orf194Q5TEA3 1177 aa17.69■□□□□ 0.42
C9orf78-205ENST00000480023 VIRMAQ69YN4 1812 aaKnown RBP17.69■□□□□ 0.42
C9orf78-205ENST00000480023 EIF4G3O43432 1585 aaKnown RBP17.69■□□□□ 0.42
C9orf78-205ENST00000480023 FRAT2O75474 233 aaPredicted RBP17.68■□□□□ 0.42
C9orf78-205ENST00000480023 CDC42BPAQ5VT25 1732 aa17.68■□□□□ 0.42
C9orf78-205ENST00000480023 DCAF11Q8TEB1 546 aa17.67■□□□□ 0.42
C9orf78-205ENST00000480023 PRDM15P57071 1507 aaPredicted RBP17.66■□□□□ 0.42
C9orf78-205ENST00000480023 CLASP1Q7Z460 1538 aa17.66■□□□□ 0.42
C9orf78-205ENST00000480023 C9orf84Q5VXU9 1444 aa17.65■□□□□ 0.42
C9orf78-205ENST00000480023 KDM2AQ9Y2K7 1162 aa17.65■□□□□ 0.42
C9orf78-205ENST00000480023 ZNF521Q96K83 1311 aa17.64■□□□□ 0.41
C9orf78-205ENST00000480023 DUSP27Q5VZP5 1158 aa17.63■□□□□ 0.41
C9orf78-205ENST00000480023 EIF5BO60841 1220 aaKnown RBP17.62■□□□□ 0.41
C9orf78-205ENST00000480023 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.62■□□□□ 0.41
C9orf78-205ENST00000480023 EIF3AQ14152 1382 aaKnown RBP17.61■□□□□ 0.41
C9orf78-205ENST00000480023 TESK2Q96S53 571 aa17.61■□□□□ 0.41
C9orf78-205ENST00000480023 ABCC10Q5T3U5 1492 aa17.61■□□□□ 0.41
C9orf78-205ENST00000480023 DISP3Q9P2K9 1392 aa17.6■□□□□ 0.41
C9orf78-205ENST00000480023 PLEKHH1Q9ULM0 1364 aa17.6■□□□□ 0.41
C9orf78-205ENST00000480023 CC2D1BQ5T0F9 858 aaKnown RBP17.59■□□□□ 0.41
C9orf78-205ENST00000480023 EIF2AK4Q9P2K8 1649 aaKnown RBP17.59■□□□□ 0.41
C9orf78-205ENST00000480023 ERBINQ96RT1 1412 aa17.58■□□□□ 0.41
C9orf78-205ENST00000480023 FAM135AQ9P2D6 1515 aa17.58■□□□□ 0.4
C9orf78-205ENST00000480023 ADAMTS8Q9UP79 889 aa17.57■□□□□ 0.4
C9orf78-205ENST00000480023 ARHGEF5Q12774 1597 aa17.57■□□□□ 0.4
C9orf78-205ENST00000480023 USP19O94966 1318 aa17.57■□□□□ 0.4
C9orf78-205ENST00000480023 PANK3Q9H999 370 aa17.57■□□□□ 0.4
C9orf78-205ENST00000480023 ZNF777Q9ULD5 760 aaPredicted RBP17.57■□□□□ 0.4
C9orf78-205ENST00000480023 A2MP01023 1474 aa17.56■□□□□ 0.4
C9orf78-205ENST00000480023 CCDC144AA2RUR9 1427 aa17.55■□□□□ 0.4
C9orf78-205ENST00000480023 GOLGA2Q08379 1002 aa17.55■□□□□ 0.4
C9orf78-205ENST00000480023 NUP160Q12769 1436 aa17.55■□□□□ 0.4
C9orf78-205ENST00000480023 TRMT2AQ8IZ69 625 aaKnown RBP17.54■□□□□ 0.4
C9orf78-205ENST00000480023 NBPF1Q3BBV0 1214 aa17.54■□□□□ 0.4
C9orf78-205ENST00000480023 SYNJ2O15056 1496 aa17.54■□□□□ 0.4
C9orf78-205ENST00000480023 RGS3P49796 1198 aa17.53■□□□□ 0.4
C9orf78-205ENST00000480023 L1TD1Q5T7N2 865 aaKnown RBP17.53■□□□□ 0.4
C9orf78-205ENST00000480023 PLB1Q6P1J6 1458 aa17.53■□□□□ 0.4
C9orf78-205ENST00000480023 SLFN5Q08AF3 891 aa17.53■□□□□ 0.4
C9orf78-205ENST00000480023 CCDC141Q6ZP82 1450 aa17.53■□□□□ 0.4
C9orf78-205ENST00000480023 RNF17Q9BXT8 1623 aaKnown RBP17.52■□□□□ 0.4
C9orf78-205ENST00000480023 TMF1P82094 1093 aa17.52■□□□□ 0.4
C9orf78-205ENST00000480023 NLRP1Q9C000 1473 aa17.52■□□□□ 0.4
C9orf78-205ENST00000480023 POGKQ9P215 609 aa17.51■□□□□ 0.39
C9orf78-205ENST00000480023 WDR7Q9Y4E6 1490 aa17.51■□□□□ 0.39
C9orf78-205ENST00000480023 MYO5CQ9NQX4 1742 aa17.51■□□□□ 0.39
C9orf78-205ENST00000480023 NKTRP30414 1462 aaKnown RBP17.5■□□□□ 0.39
C9orf78-205ENST00000480023 GRIN2AQ12879 1464 aa17.5■□□□□ 0.39
C9orf78-205ENST00000480023 BECN1Q14457 450 aa17.5■□□□□ 0.39
C9orf78-205ENST00000480023 PIK3C2GO75747 1445 aa17.5■□□□□ 0.39
C9orf78-205ENST00000480023 PLA2R1Q13018 1463 aa17.5■□□□□ 0.39
C9orf78-205ENST00000480023 ABCC2Q92887 1545 aa17.5■□□□□ 0.39
C9orf78-205ENST00000480023 TSPY4P0CV99 314 aa17.5■□□□□ 0.39
C9orf78-205ENST00000480023 TSPY10P0CW01 314 aa17.5■□□□□ 0.39
C9orf78-205ENST00000480023 UNC13BO14795 1591 aa17.5■□□□□ 0.39
C9orf78-205ENST00000480023 MAPK8IP3Q9UPT6 1336 aa17.49■□□□□ 0.39
C9orf78-205ENST00000480023 PPP2R1AP30153 589 aa17.49■□□□□ 0.39
C9orf78-205ENST00000480023 WDR43Q15061 677 aaKnown RBP eCLIP17.49■□□□□ 0.39
C9orf78-205ENST00000480023 MAGI2Q86UL8 1455 aa17.49■□□□□ 0.39
C9orf78-205ENST00000480023 ZMYM3Q14202 1370 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms