RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 KNSTRNQ9Y448 316 aa11.18□□□□□ -0.62
TTC3-216ENST00000479930 NUTM2FA1L443 756 aa11.16□□□□□ -0.62
TTC3-216ENST00000479930 DRC1Q96MC2 740 aa11.16□□□□□ -0.62
TTC3-216ENST00000479930 CCAR2Q8N163 923 aaKnown RBP11.16□□□□□ -0.62
TTC3-216ENST00000479930 EID1Q9Y6B2 187 aa11.16□□□□□ -0.62
TTC3-216ENST00000479930 SETQ01105 290 aaPredicted RBP11.16□□□□□ -0.62
TTC3-216ENST00000479930 WASHC2AQ641Q2 1341 aa11.15□□□□□ -0.62
TTC3-216ENST00000479930 IRX6P78412 446 aaPredicted RBP11.15□□□□□ -0.62
TTC3-216ENST00000479930 MRS2Q9HD23 443 aa11.15□□□□□ -0.62
TTC3-216ENST00000479930 NUTM2DQ5VT03 806 aaPredicted RBP11.15□□□□□ -0.62
TTC3-216ENST00000479930 GPATCH3Q96I76 525 aa11.15□□□□□ -0.62
TTC3-216ENST00000479930 HTATSF1O43719 755 aaKnown RBP11.15□□□□□ -0.62
TTC3-216ENST00000479930 GRIPAP1Q4V328 841 aa11.15□□□□□ -0.63
TTC3-216ENST00000479930 RBM5P52756 815 aaKnown RBP eCLIP11.14□□□□□ -0.638e-6■■■■□ 20.7
TTC3-216ENST00000479930 NGDNQ8NEJ9 315 aaKnown RBP11.14□□□□□ -0.63
TTC3-216ENST00000479930 CHMP4BQ9H444 224 aaKnown RBP11.14□□□□□ -0.63
TTC3-216ENST00000479930 ANKRD62A6NC57 917 aa11.14□□□□□ -0.63
TTC3-216ENST00000479930 EP400NLQ6ZTU2 488 aa11.14□□□□□ -0.63
TTC3-216ENST00000479930 SYNE3Q6ZMZ3 975 aa11.13□□□□□ -0.63
TTC3-216ENST00000479930 USP35Q9P2H5 1018 aa11.13□□□□□ -0.63
TTC3-216ENST00000479930 VTI1AQ96AJ9 217 aa11.13□□□□□ -0.63
TTC3-216ENST00000479930 MATR3P43243 847 aaKnown RBP eCLIP11.13□□□□□ -0.637e-7■■□□□ 11.5
TTC3-216ENST00000479930 SF3A1Q15459 793 aaKnown RBP11.12□□□□□ -0.63
TTC3-216ENST00000479930 NAP1L1P55209 391 aaKnown RBP11.12□□□□□ -0.63
TTC3-216ENST00000479930 CCDC27Q2M243 656 aa11.11□□□□□ -0.63
TTC3-216ENST00000479930 HOMER2Q9NSB8 354 aa11.11□□□□□ -0.63
TTC3-216ENST00000479930 CCDC47Q96A33 483 aaKnown RBP11.11□□□□□ -0.63
TTC3-216ENST00000479930 SART3Q15020 963 aaKnown RBP11.11□□□□□ -0.63
TTC3-216ENST00000479930 SCLT1Q96NL6 688 aa11.11□□□□□ -0.63
TTC3-216ENST00000479930 FAM177BA6PVY3 158 aa11.1□□□□□ -0.63
TTC3-216ENST00000479930 GGT6Q6P531 493 aa11.1□□□□□ -0.63
TTC3-216ENST00000479930 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
TTC3-216ENST00000479930 ECM2O94769 699 aaPredicted RBP11.1□□□□□ -0.63
TTC3-216ENST00000479930 CLEC11AQ9Y240 323 aa11.1□□□□□ -0.63
TTC3-216ENST00000479930 ATP2B2Q01814 1243 aa11.09□□□□□ -0.63
TTC3-216ENST00000479930 PLEKHD1A6NEE1 506 aa11.09□□□□□ -0.63
TTC3-216ENST00000479930 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.09□□□□□ -0.63
TTC3-216ENST00000479930 NOL8Q76FK4 1167 aaKnown RBP11.09□□□□□ -0.63
TTC3-216ENST00000479930 HSP90AB4PQ58FF6 505 aa11.09□□□□□ -0.63
TTC3-216ENST00000479930 EPS15P42566 896 aa11.08□□□□□ -0.64
TTC3-216ENST00000479930 RGS3P49796 1198 aa11.08□□□□□ -0.64
TTC3-216ENST00000479930 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
TTC3-216ENST00000479930 CDCA8Q53HL2 280 aa11.07□□□□□ -0.64
TTC3-216ENST00000479930 AMPHP49418 695 aa11.07□□□□□ -0.64
TTC3-216ENST00000479930 DDX10Q13206 875 aaKnown RBP11.07□□□□□ -0.64
TTC3-216ENST00000479930 SKIDA1Q1XH10 827 aa11.07□□□□□ -0.64
TTC3-216ENST00000479930 BIN2Q9UBW5 565 aaPredicted RBP11.07□□□□□ -0.64
TTC3-216ENST00000479930 BEGAINQ9BUH8 593 aa11.07□□□□□ -0.64
TTC3-216ENST00000479930 SLC4A10Q6U841 1118 aa11.06□□□□□ -0.64
TTC3-216ENST00000479930 NEFHP12036 1026 aa11.06□□□□□ -0.64
TTC3-216ENST00000479930 MSNP26038 577 aaKnown RBP11.06□□□□□ -0.64
TTC3-216ENST00000479930 HDGFL2Q7Z4V5 671 aaPredicted RBP11.06□□□□□ -0.64
TTC3-216ENST00000479930 RDXP35241 583 aaKnown RBP11.06□□□□□ -0.64
TTC3-216ENST00000479930 CCDC70Q6NSX1 233 aa11.05□□□□□ -0.64
TTC3-216ENST00000479930 SUPT16HQ9Y5B9 1047 aaKnown RBP11.05□□□□□ -0.64
TTC3-216ENST00000479930 C1orf141Q5JVX7 400 aa11.05□□□□□ -0.64
TTC3-216ENST00000479930 CC2D1BQ5T0F9 858 aaKnown RBP11.04□□□□□ -0.64
TTC3-216ENST00000479930 STK31Q9BXU1 1019 aa11.04□□□□□ -0.64
TTC3-216ENST00000479930 BIRC2Q13490 618 aa11.04□□□□□ -0.64
TTC3-216ENST00000479930 TTC5Q8N0Z6 440 aa11.04□□□□□ -0.64
TTC3-216ENST00000479930 HSCBQ8IWL3 235 aa11.04□□□□□ -0.64
TTC3-216ENST00000479930 SLKQ9H2G2 1235 aaPredicted RBP11.04□□□□□ -0.64
TTC3-216ENST00000479930 GSE1Q14687 1217 aa11.03□□□□□ -0.64
TTC3-216ENST00000479930 BCCIPQ9P287 314 aaKnown RBP eCLIP11.03□□□□□ -0.64
TTC3-216ENST00000479930 TCERG1O14776 1098 aaKnown RBP11.03□□□□□ -0.64
TTC3-216ENST00000479930 COMMD10Q9Y6G5 202 aa11.03□□□□□ -0.64
TTC3-216ENST00000479930 ABCC9O60706 1549 aa11.03□□□□□ -0.64
TTC3-216ENST00000479930 SPAG9O60271 1321 aaKnown RBP11.03□□□□□ -0.64
TTC3-216ENST00000479930 TPM1P09493 284 aa11.03□□□□□ -0.64
TTC3-216ENST00000479930 PDCL3Q9H2J4 239 aa11.03□□□□□ -0.64
TTC3-216ENST00000479930 KDM4AO75164 1064 aa11.02□□□□□ -0.64
TTC3-216ENST00000479930 MRPS9P82933 396 aaKnown RBP11.02□□□□□ -0.65
TTC3-216ENST00000479930 ZRSR2Q15696 482 aaKnown RBP11.02□□□□□ -0.65
TTC3-216ENST00000479930 TRIM21P19474 475 aaKnown RBP11.02□□□□□ -0.65
TTC3-216ENST00000479930 TRIM29Q14134 588 aa11.02□□□□□ -0.65
TTC3-216ENST00000479930 NFXL1Q6ZNB6 911 aa11.01□□□□□ -0.65
TTC3-216ENST00000479930 H3BQV1 296 aa11.01□□□□□ -0.65
TTC3-216ENST00000479930 PLIN1O60240 522 aa11.01□□□□□ -0.65
TTC3-216ENST00000479930 IFFO2Q5TF58 517 aa11.01□□□□□ -0.65
TTC3-216ENST00000479930 ERICH2A1L162 156 aa11.01□□□□□ -0.65
TTC3-216ENST00000479930 CALD1Q05682 793 aaKnown RBP11.01□□□□□ -0.65
TTC3-216ENST00000479930 SYCP1Q15431 976 aa11.01□□□□□ -0.65
TTC3-216ENST00000479930 PLCD4Q9BRC7 762 aa11.01□□□□□ -0.65
TTC3-216ENST00000479930 RRP7BPQ9NSQ0 103 aa11□□□□□ -0.65
TTC3-216ENST00000479930 PABPN1LA6NDY0 278 aaKnown RBP11□□□□□ -0.65
TTC3-216ENST00000479930 RGS22Q8NE09 1264 aa11□□□□□ -0.65
TTC3-216ENST00000479930 HMMRO75330 724 aa10.99□□□□□ -0.65
TTC3-216ENST00000479930 MS4A1P11836 297 aa10.99□□□□□ -0.65
TTC3-216ENST00000479930 ZSCAN29Q8IWY8 852 aaPredicted RBP10.99□□□□□ -0.65
TTC3-216ENST00000479930 E9PSI1 815 aa10.99□□□□□ -0.65
TTC3-216ENST00000479930 LRSAM1Q6UWE0 723 aa10.99□□□□□ -0.65
TTC3-216ENST00000479930 PUS7Q96PZ0 661 aaKnown RBP10.98□□□□□ -0.65
TTC3-216ENST00000479930 HIRIP3Q9BW71 556 aaPredicted RBP10.98□□□□□ -0.65
TTC3-216ENST00000479930 FAM184AQ8NB25 1140 aa10.98□□□□□ -0.65
TTC3-216ENST00000479930 MORC1Q86VD1 984 aa10.97□□□□□ -0.65
TTC3-216ENST00000479930 CPLX3Q8WVH0 158 aa10.97□□□□□ -0.65
TTC3-216ENST00000479930 ATF3P18847 181 aa10.97□□□□□ -0.65
TTC3-216ENST00000479930 SMC4Q9NTJ3 1288 aa10.97□□□□□ -0.65
TTC3-216ENST00000479930 PTMSP20962 102 aa10.97□□□□□ -0.65
TTC3-216ENST00000479930 MCTP1Q6DN14 999 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms