RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 NCOA1Q15788 1441 aa23.36■■□□□ 1.33
PRKN-207ENST00000479615 TCOF1Q13428 1488 aaKnown RBP23.36■■□□□ 1.33
PRKN-207ENST00000479615 ABCC5O15440 1437 aa23.35■■□□□ 1.33
PRKN-207ENST00000479615 PTPN23Q9H3S7 1636 aa23.35■■□□□ 1.33
PRKN-207ENST00000479615 PKD2Q13563 968 aa23.35■■□□□ 1.33
PRKN-207ENST00000479615 DUOX2Q9NRD8 1548 aa23.34■■□□□ 1.33
PRKN-207ENST00000479615 CERKQ8TCT0 537 aa23.34■■□□□ 1.33
PRKN-207ENST00000479615 PZPP20742 1482 aa23.34■■□□□ 1.33
PRKN-207ENST00000479615 STRCQ7RTU9 1775 aa23.33■■□□□ 1.33
PRKN-207ENST00000479615 EIF2AK4Q9P2K8 1649 aaKnown RBP23.33■■□□□ 1.32
PRKN-207ENST00000479615 PLA2R1Q13018 1463 aa23.32■■□□□ 1.32
PRKN-207ENST00000479615 KIF15Q9NS87 1388 aa23.32■■□□□ 1.32
PRKN-207ENST00000479615 DAPK1P53355 1430 aa23.32■■□□□ 1.32
PRKN-207ENST00000479615 TNRQ92752 1358 aa23.31■■□□□ 1.32
PRKN-207ENST00000479615 ERBINQ96RT1 1412 aa23.3■■□□□ 1.32
PRKN-207ENST00000479615 A2ML1A8K2U0 1454 aa23.3■■□□□ 1.32
PRKN-207ENST00000479615 CAMSAP1Q5T5Y3 1602 aa23.3■■□□□ 1.32
PRKN-207ENST00000479615 RNF17Q9BXT8 1623 aaKnown RBP23.3■■□□□ 1.32
PRKN-207ENST00000479615 ANKRD30AQ9BXX3 1397 aa23.29■■□□□ 1.32
PRKN-207ENST00000479615 CEP170BQ9Y4F5 1589 aaPredicted RBP23.29■■□□□ 1.32
PRKN-207ENST00000479615 MYO3AQ8NEV4 1616 aa23.29■■□□□ 1.32
PRKN-207ENST00000479615 ZNF142P52746 1687 aaPredicted RBP23.28■■□□□ 1.32
PRKN-207ENST00000479615 FBXO31Q5XUX0 539 aaPredicted RBP23.28■■□□□ 1.32
PRKN-207ENST00000479615 RRP7BPQ9NSQ0 103 aa23.28■■□□□ 1.32
PRKN-207ENST00000479615 DNMT1P26358 1616 aaKnown RBP23.26■■□□□ 1.31
PRKN-207ENST00000479615 NLRP1Q9C000 1473 aa23.25■■□□□ 1.31
PRKN-207ENST00000479615 THEMISQ8N1K5 641 aaPredicted RBP23.25■■□□□ 1.31
PRKN-207ENST00000479615 ZC3H13Q5T200 1668 aaKnown RBP23.25■■□□□ 1.31
PRKN-207ENST00000479615 ABCC3O15438 1527 aa23.23■■□□□ 1.31
PRKN-207ENST00000479615 NCKAP5LQ9HCH0 1330 aa23.23■■□□□ 1.31
PRKN-207ENST00000479615 CROCC2H7BZ55 1655 aa23.22■■□□□ 1.31
PRKN-207ENST00000479615 FAM50AQ14320 339 aaKnown RBP23.21■■□□□ 1.31
PRKN-207ENST00000479615 KANK1Q14678 1352 aa23.21■■□□□ 1.31
PRKN-207ENST00000479615 CHIC2Q9UKJ5 165 aa23.19■■□□□ 1.3
PRKN-207ENST00000479615 ARHGAP31Q2M1Z3 1444 aa23.18■■□□□ 1.3
PRKN-207ENST00000479615 ANKLE2Q86XL3 938 aa23.17■■□□□ 1.3
PRKN-207ENST00000479615 MROH1Q8NDA8 1641 aa23.17■■□□□ 1.3
PRKN-207ENST00000479615 PRDM15P57071 1507 aaPredicted RBP23.17■■□□□ 1.3
PRKN-207ENST00000479615 ADGRL2O95490 1459 aa23.17■■□□□ 1.3
PRKN-207ENST00000479615 SPATA31D1Q6ZQQ2 1576 aa23.15■■□□□ 1.3
PRKN-207ENST00000479615 ERVK-7P63135 1459 aa23.14■■□□□ 1.29
PRKN-207ENST00000479615 IQSEC2Q5JU85 1478 aa23.14■■□□□ 1.29
PRKN-207ENST00000479615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.14■■□□□ 1.29
PRKN-207ENST00000479615 UGGT1Q9NYU2 1555 aa23.13■■□□□ 1.29
PRKN-207ENST00000479615 DEPDC5O75140 1603 aa23.1■■□□□ 1.29
PRKN-207ENST00000479615 LTBP4Q8N2S1 1624 aa23.1■■□□□ 1.29
PRKN-207ENST00000479615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.1■■□□□ 1.29
PRKN-207ENST00000479615 ANKRD50Q9ULJ7 1429 aa23.08■■□□□ 1.29
PRKN-207ENST00000479615 LMTK2Q8IWU2 1503 aa23.08■■□□□ 1.29
PRKN-207ENST00000479615 ROCK1Q13464 1354 aa23.06■■□□□ 1.28
PRKN-207ENST00000479615 ZNF335Q9H4Z2 1342 aaPredicted RBP23.06■■□□□ 1.28
PRKN-207ENST00000479615 CEP152O94986 1710 aa23.05■■□□□ 1.28
PRKN-207ENST00000479615 MED14O60244 1454 aa23.05■■□□□ 1.28
PRKN-207ENST00000479615 VWDEQ8N2E2 1590 aa23.04■■□□□ 1.28
PRKN-207ENST00000479615 NPHP4O75161 1426 aaPredicted RBP23.01■■□□□ 1.27
PRKN-207ENST00000479615 POLR1AO95602 1720 aaPredicted RBP23■■□□□ 1.27
PRKN-207ENST00000479615 NEURL4Q96JN8 1562 aa22.99■■□□□ 1.27
PRKN-207ENST00000479615 SLC52A1Q9NWF4 448 aa22.99■■□□□ 1.27
PRKN-207ENST00000479615 STAG3Q9UJ98 1225 aa22.99■■□□□ 1.27
PRKN-207ENST00000479615 EID1Q9Y6B2 187 aa22.98■■□□□ 1.27
PRKN-207ENST00000479615 RPRD2Q5VT52 1461 aaKnown RBP22.98■■□□□ 1.27
PRKN-207ENST00000479615 CPS1P31327 1500 aa22.96■■□□□ 1.27
PRKN-207ENST00000479615 EFCAB6Q5THR3 1501 aa22.95■■□□□ 1.26
PRKN-207ENST00000479615 SLIT1O75093 1534 aa22.94■■□□□ 1.26
PRKN-207ENST00000479615 NOS1P29475 1434 aa22.94■■□□□ 1.26
PRKN-207ENST00000479615 IDI1Q13907 227 aa22.94■■□□□ 1.26
PRKN-207ENST00000479615 TXNDC2Q86VQ3 553 aa22.94■■□□□ 1.26
PRKN-207ENST00000479615 ARHGAP23Q9P227 1491 aa22.93■■□□□ 1.26
PRKN-207ENST00000479615 PPARGC1BQ86YN6 1023 aaKnown RBP22.93■■□□□ 1.26
PRKN-207ENST00000479615 SCAF11Q99590 1463 aaKnown RBP22.92■■□□□ 1.26
PRKN-207ENST00000479615 UBR1Q8IWV7 1749 aa22.92■■□□□ 1.26
PRKN-207ENST00000479615 TMEM2Q9UHN6 1383 aa22.91■■□□□ 1.26
PRKN-207ENST00000479615 CFAP65Q6ZU64 1925 aaKnown RBP22.91■■□□□ 1.26
PRKN-207ENST00000479615 UBAP1LF5GYI3 381 aa22.9■■□□□ 1.26
PRKN-207ENST00000479615 ITGAEP38570 1179 aa22.9■■□□□ 1.26
PRKN-207ENST00000479615 KDM5AP29375 1690 aaKnown RBP22.9■■□□□ 1.26
PRKN-207ENST00000479615 LTKP29376 864 aa22.89■■□□□ 1.25
PRKN-207ENST00000479615 RRBP1Q9P2E9 1410 aaKnown RBP22.89■■□□□ 1.25
PRKN-207ENST00000479615 IQGAP1P46940 1657 aa22.88■■□□□ 1.25
PRKN-207ENST00000479615 HDGFP51858 240 aaKnown RBP22.88■■□□□ 1.25
PRKN-207ENST00000479615 UNC13BO14795 1591 aa22.86■■□□□ 1.25
PRKN-207ENST00000479615 TOM1O60784 492 aa22.86■■□□□ 1.25
PRKN-207ENST00000479615 TET3O43151 1660 aa22.85■■□□□ 1.25
PRKN-207ENST00000479615 PIK3C2BO00750 1634 aa22.85■■□□□ 1.25
PRKN-207ENST00000479615 NUP155O75694 1391 aa22.85■■□□□ 1.25
PRKN-207ENST00000479615 SYNMO15061 1565 aa22.84■■□□□ 1.25
PRKN-207ENST00000479615 ADGRB3O60242 1522 aa22.8■■□□□ 1.24
PRKN-207ENST00000479615 GCC2Q8IWJ2 1684 aa22.79■■□□□ 1.24
PRKN-207ENST00000479615 IQGAP3Q86VI3 1631 aa22.79■■□□□ 1.24
PRKN-207ENST00000479615 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.77■■□□□ 1.24
PRKN-207ENST00000479615 LRRC7Q96NW7 1537 aa22.73■■□□□ 1.23
PRKN-207ENST00000479615 PPP1R15AO75807 674 aaPredicted RBP22.72■■□□□ 1.23
PRKN-207ENST00000479615 KCNA6P17658 529 aa22.72■■□□□ 1.23
PRKN-207ENST00000479615 BCANQ96GW7 911 aa22.71■■□□□ 1.23
PRKN-207ENST00000479615 NAIPQ13075 1403 aa22.71■■□□□ 1.23
PRKN-207ENST00000479615 CHGAP10645 457 aaKnown RBP22.7■■□□□ 1.22
PRKN-207ENST00000479615 PLEKHG1Q9ULL1 1385 aa22.7■■□□□ 1.22
PRKN-207ENST00000479615 ZFYVE9O95405 1425 aa22.7■■□□□ 1.22
PRKN-207ENST00000479615 E9PCH4 1651 aa22.7■■□□□ 1.22
PRKN-207ENST00000479615 RIMS2Q9UQ26 1411 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms