RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 KDM5DQ9BY66 1539 aa27.34■■□□□ 1.97
ECHDC1-216ENST00000479525 NCKAP5LQ9HCH0 1330 aa27.34■■□□□ 1.97
ECHDC1-216ENST00000479525 FBXO31Q5XUX0 539 aaPredicted RBP27.34■■□□□ 1.97
ECHDC1-216ENST00000479525 CFAP65Q6ZU64 1925 aaKnown RBP27.32■■□□□ 1.96
ECHDC1-216ENST00000479525 MIA2Q96PC5 1412 aa27.32■■□□□ 1.96
ECHDC1-216ENST00000479525 CEP152O94986 1710 aa27.31■■□□□ 1.96
ECHDC1-216ENST00000479525 DMRT2Q9Y5R5 561 aa27.3■■□□□ 1.96
ECHDC1-216ENST00000479525 PTPRTO14522 1441 aa27.29■■□□□ 1.96
ECHDC1-216ENST00000479525 WASHC2CQ9Y4E1 1318 aa27.29■■□□□ 1.96
ECHDC1-216ENST00000479525 RNF17Q9BXT8 1623 aaKnown RBP27.28■■□□□ 1.96
ECHDC1-216ENST00000479525 DNMT1P26358 1616 aaKnown RBP27.28■■□□□ 1.96
ECHDC1-216ENST00000479525 PPP6R1Q9UPN7 881 aa27.27■■□□□ 1.96
ECHDC1-216ENST00000479525 MROH1Q8NDA8 1641 aa27.25■■□□□ 1.95
ECHDC1-216ENST00000479525 PZPP20742 1482 aa27.24■■□□□ 1.95
ECHDC1-216ENST00000479525 EIF2AK4Q9P2K8 1649 aaKnown RBP27.24■■□□□ 1.95
ECHDC1-216ENST00000479525 TNRQ92752 1358 aa27.23■■□□□ 1.95
ECHDC1-216ENST00000479525 ABCC5O15440 1437 aa27.23■■□□□ 1.95
ECHDC1-216ENST00000479525 A2ML1A8K2U0 1454 aa27.23■■□□□ 1.95
ECHDC1-216ENST00000479525 LTBP4Q8N2S1 1624 aa27.23■■□□□ 1.95
ECHDC1-216ENST00000479525 FGD6Q6ZV73 1430 aa27.22■■□□□ 1.95
ECHDC1-216ENST00000479525 ABCC3O15438 1527 aa27.21■■□□□ 1.95
ECHDC1-216ENST00000479525 POLR1AO95602 1720 aaPredicted RBP27.2■■□□□ 1.95
ECHDC1-216ENST00000479525 RRP7BPQ9NSQ0 103 aa27.2■■□□□ 1.94
ECHDC1-216ENST00000479525 ZC3H13Q5T200 1668 aaKnown RBP27.19■■□□□ 1.94
ECHDC1-216ENST00000479525 DAPK1P53355 1430 aa27.19■■□□□ 1.94
ECHDC1-216ENST00000479525 CHIC2Q9UKJ5 165 aa27.19■■□□□ 1.94
ECHDC1-216ENST00000479525 DUOX2Q9NRD8 1548 aa27.18■■□□□ 1.94
ECHDC1-216ENST00000479525 FAM135AQ9P2D6 1515 aa27.18■■□□□ 1.94
ECHDC1-216ENST00000479525 PLA2R1Q13018 1463 aa27.17■■□□□ 1.94
ECHDC1-216ENST00000479525 TCOF1Q13428 1488 aaKnown RBP27.17■■□□□ 1.94
ECHDC1-216ENST00000479525 KIF15Q9NS87 1388 aa27.17■■□□□ 1.94
ECHDC1-216ENST00000479525 ZNF335Q9H4Z2 1342 aaPredicted RBP27.16■■□□□ 1.94
ECHDC1-216ENST00000479525 SHANK2Q9UPX8 1470 aa27.14■■□□□ 1.94
ECHDC1-216ENST00000479525 NEURL4Q96JN8 1562 aa27.12■■□□□ 1.93
ECHDC1-216ENST00000479525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.1■■□□□ 1.932e-7■■■□□ 17
ECHDC1-216ENST00000479525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.1■■□□□ 1.93
ECHDC1-216ENST00000479525 PKD2Q13563 968 aa27.09■■□□□ 1.93
ECHDC1-216ENST00000479525 UGGT1Q9NYU2 1555 aa27.09■■□□□ 1.93
ECHDC1-216ENST00000479525 FAM50AQ14320 339 aaKnown RBP27.09■■□□□ 1.93
ECHDC1-216ENST00000479525 SPATA31D1Q6ZQQ2 1576 aa27.08■■□□□ 1.93
ECHDC1-216ENST00000479525 PPARGC1BQ86YN6 1023 aaKnown RBP27.08■■□□□ 1.93
ECHDC1-216ENST00000479525 ERVK-7P63135 1459 aa27.08■■□□□ 1.92
ECHDC1-216ENST00000479525 PRDM15P57071 1507 aaPredicted RBP27.07■■□□□ 1.92
ECHDC1-216ENST00000479525 DEPDC5O75140 1603 aa27.05■■□□□ 1.92
ECHDC1-216ENST00000479525 ERBINQ96RT1 1412 aa27.05■■□□□ 1.92
ECHDC1-216ENST00000479525 NLRP1Q9C000 1473 aa27.04■■□□□ 1.92
ECHDC1-216ENST00000479525 UBR1Q8IWV7 1749 aa27.01■■□□□ 1.91
ECHDC1-216ENST00000479525 ANKRD30AQ9BXX3 1397 aa26.99■■□□□ 1.91
ECHDC1-216ENST00000479525 IQGAP1P46940 1657 aa26.96■■□□□ 1.91
ECHDC1-216ENST00000479525 ANKLE2Q86XL3 938 aa26.96■■□□□ 1.91
ECHDC1-216ENST00000479525 THEMISQ8N1K5 641 aaPredicted RBP26.96■■□□□ 1.91
ECHDC1-216ENST00000479525 PIK3C2BO00750 1634 aa26.94■■□□□ 1.9
ECHDC1-216ENST00000479525 ADGRL2O95490 1459 aa26.92■■□□□ 1.9
ECHDC1-216ENST00000479525 IQSEC2Q5JU85 1478 aa26.92■■□□□ 1.9
ECHDC1-216ENST00000479525 NPHP4O75161 1426 aaPredicted RBP26.92■■□□□ 1.9
ECHDC1-216ENST00000479525 STRCP1A6NGW2 1772 aa26.92■■□□□ 1.9
ECHDC1-216ENST00000479525 VWDEQ8N2E2 1590 aa26.91■■□□□ 1.9
ECHDC1-216ENST00000479525 KANK1Q14678 1352 aa26.9■■□□□ 1.9
ECHDC1-216ENST00000479525 UBAP1LF5GYI3 381 aa26.89■■□□□ 1.9
ECHDC1-216ENST00000479525 ARHGAP31Q2M1Z3 1444 aa26.88■■□□□ 1.89
ECHDC1-216ENST00000479525 SYNMO15061 1565 aa26.87■■□□□ 1.89
ECHDC1-216ENST00000479525 ITGAEP38570 1179 aa26.86■■□□□ 1.89
ECHDC1-216ENST00000479525 MED14O60244 1454 aa26.86■■□□□ 1.89
ECHDC1-216ENST00000479525 EFCAB6Q5THR3 1501 aa26.85■■□□□ 1.89
ECHDC1-216ENST00000479525 LMTK2Q8IWU2 1503 aa26.84■■□□□ 1.89
ECHDC1-216ENST00000479525 ANKRD50Q9ULJ7 1429 aa26.83■■□□□ 1.89
ECHDC1-216ENST00000479525 MYO5BQ9ULV0 1848 aa26.83■■□□□ 1.88
ECHDC1-216ENST00000479525 LTKP29376 864 aa26.82■■□□□ 1.88
ECHDC1-216ENST00000479525 CPS1P31327 1500 aa26.8■■□□□ 1.88
ECHDC1-216ENST00000479525 SCAF11Q99590 1463 aaKnown RBP26.8■■□□□ 1.88
ECHDC1-216ENST00000479525 SCAF1Q9H7N4 1312 aaKnown RBP26.8■■□□□ 1.88
ECHDC1-216ENST00000479525 SENP3Q9H4L4 574 aaPredicted RBP26.79■■□□□ 1.88
ECHDC1-216ENST00000479525 ARHGAP23Q9P227 1491 aa26.77■■□□□ 1.88
ECHDC1-216ENST00000479525 TXNDC2Q86VQ3 553 aa26.77■■□□□ 1.88
ECHDC1-216ENST00000479525 STAG3Q9UJ98 1225 aa26.77■■□□□ 1.88
ECHDC1-216ENST00000479525 SLIT1O75093 1534 aa26.77■■□□□ 1.88
ECHDC1-216ENST00000479525 PIP4K2BP78356 416 aa26.76■■□□□ 1.87
ECHDC1-216ENST00000479525 IDI1Q13907 227 aa26.76■■□□□ 1.87
ECHDC1-216ENST00000479525 UNC13BO14795 1591 aa26.76■■□□□ 1.87
ECHDC1-216ENST00000479525 TET3O43151 1660 aa26.76■■□□□ 1.87
ECHDC1-216ENST00000479525 GCC2Q8IWJ2 1684 aa26.75■■□□□ 1.87
ECHDC1-216ENST00000479525 DISP3Q9P2K9 1392 aa26.73■■□□□ 1.87
ECHDC1-216ENST00000479525 NOS1P29475 1434 aa26.72■■□□□ 1.87
ECHDC1-216ENST00000479525 E9PCH4 1651 aa26.72■■□□□ 1.87
ECHDC1-216ENST00000479525 ADGRB3O60242 1522 aa26.72■■□□□ 1.87
ECHDC1-216ENST00000479525 ALKQ9UM73 1620 aa26.71■■□□□ 1.87
ECHDC1-216ENST00000479525 XIRP1Q702N8 1843 aaKnown RBP26.7■■□□□ 1.87
ECHDC1-216ENST00000479525 TMEM2Q9UHN6 1383 aa26.7■■□□□ 1.86
ECHDC1-216ENST00000479525 KDM5AP29375 1690 aaKnown RBP26.69■■□□□ 1.86
ECHDC1-216ENST00000479525 LRRC7Q96NW7 1537 aa26.68■■□□□ 1.86
ECHDC1-216ENST00000479525 EID1Q9Y6B2 187 aa26.67■■□□□ 1.86
ECHDC1-216ENST00000479525 IQGAP3Q86VI3 1631 aa26.66■■□□□ 1.86
ECHDC1-216ENST00000479525 ROCK1Q13464 1354 aa26.64■■□□□ 1.85
ECHDC1-216ENST00000479525 ILDR2Q71H61 639 aa26.63■■□□□ 1.85
ECHDC1-216ENST00000479525 HSPA1LP34931 641 aa26.62■■□□□ 1.85
ECHDC1-216ENST00000479525 TOM1O60784 492 aa26.61■■□□□ 1.85
ECHDC1-216ENST00000479525 SLC26A8Q96RN1 970 aa26.61■■□□□ 1.85
ECHDC1-216ENST00000479525 RPRD2Q5VT52 1461 aaKnown RBP26.61■■□□□ 1.85
ECHDC1-216ENST00000479525 TMEM131LA2VDJ0 1609 aa26.61■■□□□ 1.85
ECHDC1-216ENST00000479525 CHGAP10645 457 aaKnown RBP26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms