RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 EPRSP07814 1512 aaKnown RBP18.43■□□□□ 0.54
COL20A1-206ENST00000479501 CUL7Q14999 1698 aa18.42■□□□□ 0.54
COL20A1-206ENST00000479501 NBPF8Q3BBV2 869 aa18.41■□□□□ 0.54
COL20A1-206ENST00000479501 SUPT6HQ7KZ85 1726 aaKnown RBP18.4■□□□□ 0.54
COL20A1-206ENST00000479501 CCDC146Q8IYE0 955 aa18.4■□□□□ 0.54
COL20A1-206ENST00000479501 OSCARQ8IYS5 282 aa18.4■□□□□ 0.54
COL20A1-206ENST00000479501 CDK13Q14004 1512 aaKnown RBP18.39■□□□□ 0.54
COL20A1-206ENST00000479501 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.54
COL20A1-206ENST00000479501 CHMP4BQ9H444 224 aaKnown RBP18.39■□□□□ 0.53
COL20A1-206ENST00000479501 WDR97A6NE52 1622 aa18.39■□□□□ 0.53
COL20A1-206ENST00000479501 DAPK1P53355 1430 aa18.38■□□□□ 0.53
COL20A1-206ENST00000479501 IQGAP2Q13576 1575 aa18.38■□□□□ 0.53
COL20A1-206ENST00000479501 TCERG1O14776 1098 aaKnown RBP18.37■□□□□ 0.53
COL20A1-206ENST00000479501 AFAP1Q8N556 730 aa18.37■□□□□ 0.53
COL20A1-206ENST00000479501 TERF2IPQ9NYB0 399 aa18.37■□□□□ 0.53
COL20A1-206ENST00000479501 NAP1L5Q96NT1 182 aaPredicted RBP18.37■□□□□ 0.53
COL20A1-206ENST00000479501 C9orf84Q5VXU9 1444 aa18.36■□□□□ 0.53
COL20A1-206ENST00000479501 KIAA1107Q9UPP5 1409 aa18.36■□□□□ 0.53
COL20A1-206ENST00000479501 SOX12O15370 315 aa18.36■□□□□ 0.53
COL20A1-206ENST00000479501 STAC3Q96MF2 364 aa18.36■□□□□ 0.53
COL20A1-206ENST00000479501 VGFO15240 615 aaPredicted RBP18.35■□□□□ 0.53
COL20A1-206ENST00000479501 GOLGA6L22H0YM25 854 aa18.34■□□□□ 0.53
COL20A1-206ENST00000479501 ARHGAP5Q13017 1502 aa18.33■□□□□ 0.53
COL20A1-206ENST00000479501 ROCK1Q13464 1354 aa18.32■□□□□ 0.52
COL20A1-206ENST00000479501 LMOD2Q6P5Q4 547 aa18.31■□□□□ 0.52
COL20A1-206ENST00000479501 CYB5RLQ6IPT4 315 aa18.3■□□□□ 0.52
COL20A1-206ENST00000479501 IPO8O15397 1037 aaKnown RBP18.29■□□□□ 0.52
COL20A1-206ENST00000479501 TRHP20396 242 aaPredicted RBP18.28■□□□□ 0.52
COL20A1-206ENST00000479501 RRP1P56182 461 aaKnown RBP18.28■□□□□ 0.52
COL20A1-206ENST00000479501 NBPF1Q3BBV0 1214 aa18.28■□□□□ 0.52
COL20A1-206ENST00000479501 CENPJQ9HC77 1338 aaPredicted RBP18.27■□□□□ 0.51
COL20A1-206ENST00000479501 HAP1P54257 671 aaPredicted RBP18.26■□□□□ 0.51
COL20A1-206ENST00000479501 EVC2Q86UK5 1308 aa18.26■□□□□ 0.51
COL20A1-206ENST00000479501 PLIN1O60240 522 aa18.26■□□□□ 0.51
COL20A1-206ENST00000479501 NCLP19338 710 aaKnown RBP18.26■□□□□ 0.51
COL20A1-206ENST00000479501 EXOC6Q8TAG9 804 aa18.25■□□□□ 0.51
COL20A1-206ENST00000479501 APAF1O14727 1248 aa18.25■□□□□ 0.51
COL20A1-206ENST00000479501 CALD1Q05682 793 aaKnown RBP18.25■□□□□ 0.51
COL20A1-206ENST00000479501 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
COL20A1-206ENST00000479501 PTPN23Q9H3S7 1636 aa18.25■□□□□ 0.51
COL20A1-206ENST00000479501 CGNL1Q0VF96 1302 aa18.25■□□□□ 0.51
COL20A1-206ENST00000479501 PLB1Q6P1J6 1458 aa18.25■□□□□ 0.51
COL20A1-206ENST00000479501 RRP7AQ9Y3A4 280 aaKnown RBP18.24■□□□□ 0.51
COL20A1-206ENST00000479501 GRIN2AQ12879 1464 aa18.24■□□□□ 0.51
COL20A1-206ENST00000479501 RWDD1Q9H446 243 aaPredicted RBP18.24■□□□□ 0.51
COL20A1-206ENST00000479501 CLUAP1Q96AJ1 413 aa18.24■□□□□ 0.51
COL20A1-206ENST00000479501 ABCC5O15440 1437 aa18.24■□□□□ 0.51
COL20A1-206ENST00000479501 BRD4O60885 1362 aaPredicted RBP18.23■□□□□ 0.51
COL20A1-206ENST00000479501 ANKRD30BQ9BXX2 1392 aa18.22■□□□□ 0.51
COL20A1-206ENST00000479501 SMC4Q9NTJ3 1288 aa18.22■□□□□ 0.51
COL20A1-206ENST00000479501 PLEKHH2Q8IVE3 1493 aa18.22■□□□□ 0.51
COL20A1-206ENST00000479501 ZNF608Q9ULD9 1512 aaPredicted RBP18.21■□□□□ 0.51
COL20A1-206ENST00000479501 ITPRIPQ8IWB1 547 aa18.21■□□□□ 0.51
COL20A1-206ENST00000479501 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.21■□□□□ 0.51
COL20A1-206ENST00000479501 RTF1Q92541 710 aaKnown RBP18.21■□□□□ 0.51
COL20A1-206ENST00000479501 E9PSI1 815 aa18.21■□□□□ 0.51
COL20A1-206ENST00000479501 PTMAP06454 111 aaKnown RBP18.21■□□□□ 0.5
COL20A1-206ENST00000479501 PMFBP1Q8TBY8 1022 aa18.2■□□□□ 0.5
COL20A1-206ENST00000479501 CFAP70Q5T0N1 1121 aa18.19■□□□□ 0.5
COL20A1-206ENST00000479501 MAGI1Q96QZ7 1491 aaPredicted RBP18.19■□□□□ 0.5
COL20A1-206ENST00000479501 CCDC184Q52MB2 194 aa18.19■□□□□ 0.5
COL20A1-206ENST00000479501 DNTTIP2Q5QJE6 756 aaKnown RBP18.19■□□□□ 0.5
COL20A1-206ENST00000479501 MINK1Q8N4C8 1332 aaPredicted RBP18.19■□□□□ 0.5
COL20A1-206ENST00000479501 IPO9Q96P70 1041 aaKnown RBP18.18■□□□□ 0.5
COL20A1-206ENST00000479501 ARHGEF11O15085 1522 aa18.17■□□□□ 0.5
COL20A1-206ENST00000479501 CRBNQ96SW2 442 aa18.17■□□□□ 0.5
COL20A1-206ENST00000479501 NGEFQ8N5V2 710 aa18.17■□□□□ 0.5
COL20A1-206ENST00000479501 CAMSAP2Q08AD1 1489 aa18.16■□□□□ 0.5
COL20A1-206ENST00000479501 EID1Q9Y6B2 187 aa18.16■□□□□ 0.5
COL20A1-206ENST00000479501 NCOA1Q15788 1441 aa18.15■□□□□ 0.5
COL20A1-206ENST00000479501 AKNAQ7Z591 1439 aa18.15■□□□□ 0.5
COL20A1-206ENST00000479501 A0A0G2JS52 829 aa18.15■□□□□ 0.5
COL20A1-206ENST00000479501 TMEM132EQ6IEE7 984 aa18.14■□□□□ 0.49
COL20A1-206ENST00000479501 C11orf95C9JLR9 678 aaPredicted RBP18.14■□□□□ 0.49
COL20A1-206ENST00000479501 PNISRQ8TF01 805 aaKnown RBP18.14■□□□□ 0.49
COL20A1-206ENST00000479501 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.14■□□□□ 0.49
COL20A1-206ENST00000479501 ADAMTS8Q9UP79 889 aa18.14■□□□□ 0.49
COL20A1-206ENST00000479501 CENPQQ7L2Z9 268 aaPredicted RBP18.14■□□□□ 0.49
COL20A1-206ENST00000479501 NUTM2FA1L443 756 aa18.13■□□□□ 0.49
COL20A1-206ENST00000479501 PAK3O75914 559 aaPredicted RBP18.13■□□□□ 0.49
COL20A1-206ENST00000479501 SCAPERQ9BY12 1400 aa18.13■□□□□ 0.49
COL20A1-206ENST00000479501 BCL2L13Q9BXK5 485 aa18.13■□□□□ 0.49
COL20A1-206ENST00000479501 HSP90AB1P08238 724 aaKnown RBP18.13■□□□□ 0.49
COL20A1-206ENST00000479501 PTPRKQ15262 1439 aa18.13■□□□□ 0.49
COL20A1-206ENST00000479501 L1TD1Q5T7N2 865 aaKnown RBP18.13■□□□□ 0.49
COL20A1-206ENST00000479501 FAM69CQ0P6D2 419 aa18.12■□□□□ 0.49
COL20A1-206ENST00000479501 PDE4AP27815 886 aa18.11■□□□□ 0.49
COL20A1-206ENST00000479501 HSCBQ8IWL3 235 aa18.11■□□□□ 0.49
COL20A1-206ENST00000479501 CCDC141Q6ZP82 1450 aa18.11■□□□□ 0.49
COL20A1-206ENST00000479501 NGDNQ8NEJ9 315 aaKnown RBP18.1■□□□□ 0.49
COL20A1-206ENST00000479501 LMOD3Q0VAK6 560 aa18.1■□□□□ 0.49
COL20A1-206ENST00000479501 OS9Q13438 667 aaPredicted RBP18.09■□□□□ 0.49
COL20A1-206ENST00000479501 MAPKBP1O60336 1514 aa18.09■□□□□ 0.49
COL20A1-206ENST00000479501 PPP2R1AP30153 589 aa18.08■□□□□ 0.49
COL20A1-206ENST00000479501 CDCA7LQ96GN5 454 aa18.08■□□□□ 0.49
COL20A1-206ENST00000479501 COG6Q9Y2V7 657 aa18.08■□□□□ 0.49
COL20A1-206ENST00000479501 APBB1O00213 710 aa18.08■□□□□ 0.48
COL20A1-206ENST00000479501 THOC2Q8NI27 1593 aaKnown RBP18.07■□□□□ 0.48
COL20A1-206ENST00000479501 RUNDC1Q96C34 613 aa18.07■□□□□ 0.48
COL20A1-206ENST00000479501 RPRD2Q5VT52 1461 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms