RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 CASKIN1Q8WXD9 1431 aa12.38□□□□□ -0.43
HMGCL-205ENST00000479458 LOC105371045A0A1W2PR82 267 aa12.38□□□□□ -0.43
HMGCL-205ENST00000479458 SYNMO15061 1565 aa12.38□□□□□ -0.43
HMGCL-205ENST00000479458 SAMD9LQ8IVG5 1584 aa12.38□□□□□ -0.43
HMGCL-205ENST00000479458 LRRIQ1Q96JM4 1722 aa12.37□□□□□ -0.43
HMGCL-205ENST00000479458 POTEAQ6S8J7 498 aa12.36□□□□□ -0.43
HMGCL-205ENST00000479458 ATP1B4Q9UN42 357 aaPredicted RBP12.36□□□□□ -0.43
HMGCL-205ENST00000479458 FYCO1Q9BQS8 1478 aa12.35□□□□□ -0.43
HMGCL-205ENST00000479458 ANKLE2Q86XL3 938 aa12.35□□□□□ -0.43
HMGCL-205ENST00000479458 LRRC7Q96NW7 1537 aa12.35□□□□□ -0.43
HMGCL-205ENST00000479458 A2MP01023 1474 aa12.34□□□□□ -0.43
HMGCL-205ENST00000479458 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
HMGCL-205ENST00000479458 FAM135AQ9P2D6 1515 aa12.33□□□□□ -0.44
HMGCL-205ENST00000479458 NPHP4O75161 1426 aaPredicted RBP12.33□□□□□ -0.44
HMGCL-205ENST00000479458 STRCP1A6NGW2 1772 aa12.33□□□□□ -0.44
HMGCL-205ENST00000479458 ATP7AQ04656 1500 aa12.32□□□□□ -0.44
HMGCL-205ENST00000479458 CDC42BPAQ5VT25 1732 aa12.31□□□□□ -0.44
HMGCL-205ENST00000479458 INO80Q9ULG1 1556 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-205ENST00000479458 FAM135BQ49AJ0 1406 aa12.31□□□□□ -0.44
HMGCL-205ENST00000479458 THEMISQ8N1K5 641 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-205ENST00000479458 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
HMGCL-205ENST00000479458 IQGAP1P46940 1657 aa12.31□□□□□ -0.44
HMGCL-205ENST00000479458 SPAG9O60271 1321 aaKnown RBP12.31□□□□□ -0.44
HMGCL-205ENST00000479458 KIAA1107Q9UPP5 1409 aa12.3□□□□□ -0.44
HMGCL-205ENST00000479458 NLRP1Q9C000 1473 aa12.3□□□□□ -0.44
HMGCL-205ENST00000479458 TNRQ92752 1358 aa12.3□□□□□ -0.44
HMGCL-205ENST00000479458 ADGBQ8N7X0 1667 aa12.29□□□□□ -0.44
HMGCL-205ENST00000479458 SRCAPQ6ZRS2 3230 aa12.29□□□□□ -0.44
HMGCL-205ENST00000479458 PZPP20742 1482 aa12.28□□□□□ -0.44
HMGCL-205ENST00000479458 GGT6Q6P531 493 aa12.28□□□□□ -0.44
HMGCL-205ENST00000479458 POTEDQ86YR6 584 aa12.28□□□□□ -0.44
HMGCL-205ENST00000479458 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.28□□□□□ -0.44
HMGCL-205ENST00000479458 SETD1AO15047 1707 aaKnown RBP12.28□□□□□ -0.44
HMGCL-205ENST00000479458 PLEKHH2Q8IVE3 1493 aa12.27□□□□□ -0.45
HMGCL-205ENST00000479458 SYCP2Q9BX26 1530 aa12.27□□□□□ -0.45
HMGCL-205ENST00000479458 UGGT1Q9NYU2 1555 aa12.26□□□□□ -0.45
HMGCL-205ENST00000479458 UPF1Q92900 1129 aaKnown RBP eCLIP12.26□□□□□ -0.45
HMGCL-205ENST00000479458 MIA2Q96PC5 1412 aa12.25□□□□□ -0.45
HMGCL-205ENST00000479458 XIRP1Q702N8 1843 aaKnown RBP12.25□□□□□ -0.45
HMGCL-205ENST00000479458 ZC3H13Q5T200 1668 aaKnown RBP12.24□□□□□ -0.45
HMGCL-205ENST00000479458 VPS8Q8N3P4 1428 aa12.24□□□□□ -0.45
HMGCL-205ENST00000479458 KDM5DQ9BY66 1539 aa12.23□□□□□ -0.45
HMGCL-205ENST00000479458 RTEL1-TNFRSF6BF6WH68 1400 aa12.21□□□□□ -0.45
HMGCL-205ENST00000479458 FBXO31Q5XUX0 539 aaPredicted RBP12.21□□□□□ -0.45
HMGCL-205ENST00000479458 GPATCH8Q9UKJ3 1502 aaKnown RBP12.21□□□□□ -0.46
HMGCL-205ENST00000479458 DHX29Q7Z478 1369 aaKnown RBP12.2□□□□□ -0.46
HMGCL-205ENST00000479458 HNRNPMP52272 730 aaKnown RBP eCLIP12.2□□□□□ -0.46
HMGCL-205ENST00000479458 MTUS2Q5JR59 1369 aa12.19□□□□□ -0.46
HMGCL-205ENST00000479458 EHBP1L1Q8N3D4 1523 aa12.19□□□□□ -0.46
HMGCL-205ENST00000479458 CDK12Q9NYV4 1490 aaPredicted RBP12.18□□□□□ -0.46
HMGCL-205ENST00000479458 TIAM1Q13009 1591 aa12.18□□□□□ -0.46
HMGCL-205ENST00000479458 ROBO1Q9Y6N7 1651 aa12.17□□□□□ -0.46
HMGCL-205ENST00000479458 LRRC9Q6ZRR7 1453 aa12.17□□□□□ -0.46
HMGCL-205ENST00000479458 JCADQ9P266 1359 aa12.16□□□□□ -0.46
HMGCL-205ENST00000479458 ZNF772Q68DY9 489 aaPredicted RBP12.15□□□□□ -0.46
HMGCL-205ENST00000479458 ZNF777Q9ULD5 760 aaPredicted RBP12.15□□□□□ -0.46
HMGCL-205ENST00000479458 SCAF11Q99590 1463 aaKnown RBP12.14□□□□□ -0.47
HMGCL-205ENST00000479458 MAP3K1Q13233 1512 aa12.14□□□□□ -0.47
HMGCL-205ENST00000479458 ARHGAP23Q9P227 1491 aa12.14□□□□□ -0.47
HMGCL-205ENST00000479458 WASHC2CQ9Y4E1 1318 aa12.13□□□□□ -0.47
HMGCL-205ENST00000479458 SLIT1O75093 1534 aa12.13□□□□□ -0.47
HMGCL-205ENST00000479458 CFDP1Q9UEE9 299 aaPredicted RBP12.13□□□□□ -0.47
HMGCL-205ENST00000479458 MBD5Q9P267 1494 aa12.13□□□□□ -0.47
HMGCL-205ENST00000479458 FGD6Q6ZV73 1430 aa12.12□□□□□ -0.47
HMGCL-205ENST00000479458 UBR1Q8IWV7 1749 aa12.12□□□□□ -0.47
HMGCL-205ENST00000479458 CCNB3Q8WWL7 1395 aa12.12□□□□□ -0.47
HMGCL-205ENST00000479458 SPATA31A6Q5VVP1 1343 aa12.11□□□□□ -0.47
HMGCL-205ENST00000479458 NCOA2Q15596 1464 aa12.11□□□□□ -0.47
HMGCL-205ENST00000479458 KIF3BO15066 747 aa12.11□□□□□ -0.47
HMGCL-205ENST00000479458 PHLPP1O60346 1717 aa12.11□□□□□ -0.47
HMGCL-205ENST00000479458 TMEM94Q12767 1356 aa12.09□□□□□ -0.47
HMGCL-205ENST00000479458 DCAF8L1A6NGE4 600 aa12.09□□□□□ -0.47
HMGCL-205ENST00000479458 ABCC3O15438 1527 aa12.08□□□□□ -0.48
HMGCL-205ENST00000479458 KANK4Q5T7N3 995 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-205ENST00000479458 ERVK-7P63135 1459 aa12.08□□□□□ -0.48
HMGCL-205ENST00000479458 CAMSAP2Q08AD1 1489 aa12.08□□□□□ -0.48
HMGCL-205ENST00000479458 COL16A1Q07092 1604 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-205ENST00000479458 KCNA6P17658 529 aa12.07□□□□□ -0.48
HMGCL-205ENST00000479458 RXRBP28702 533 aa12.07□□□□□ -0.48
HMGCL-205ENST00000479458 LTKP29376 864 aa12.07□□□□□ -0.48
HMGCL-205ENST00000479458 RSPH4AQ5TD94 716 aa12.07□□□□□ -0.48
HMGCL-205ENST00000479458 PRDM15P57071 1507 aaPredicted RBP12.06□□□□□ -0.48
HMGCL-205ENST00000479458 TXNDC2Q86VQ3 553 aa12.06□□□□□ -0.48
HMGCL-205ENST00000479458 LRP6O75581 1613 aa12.06□□□□□ -0.48
HMGCL-205ENST00000479458 NKTRP30414 1462 aaKnown RBP12.06□□□□□ -0.48
HMGCL-205ENST00000479458 APLP2Q06481 763 aa12.05□□□□□ -0.48
HMGCL-205ENST00000479458 TRIM52Q96A61 297 aa12.05□□□□□ -0.48
HMGCL-205ENST00000479458 SHPRHQ149N8 1683 aa12.05□□□□□ -0.48
HMGCL-205ENST00000479458 KDM5AP29375 1690 aaKnown RBP12.04□□□□□ -0.48
HMGCL-205ENST00000479458 SLAIN2Q9P270 581 aa12.04□□□□□ -0.48
HMGCL-205ENST00000479458 NWD1Q149M9 1564 aa12.04□□□□□ -0.48
HMGCL-205ENST00000479458 EID1Q9Y6B2 187 aa12.03□□□□□ -0.48
HMGCL-205ENST00000479458 ZNF644Q9H582 1327 aaPredicted RBP12.03□□□□□ -0.48
HMGCL-205ENST00000479458 CCDC141Q6ZP82 1450 aa12.02□□□□□ -0.48
HMGCL-205ENST00000479458 TET3O43151 1660 aa12.02□□□□□ -0.49
HMGCL-205ENST00000479458 MSH6P52701 1360 aa12.02□□□□□ -0.49
HMGCL-205ENST00000479458 AHDC1Q5TGY3 1603 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-205ENST00000479458 ARHGAP31Q2M1Z3 1444 aa12.01□□□□□ -0.49
HMGCL-205ENST00000479458 NCOA3Q9Y6Q9 1424 aa12.01□□□□□ -0.49
HMGCL-205ENST00000479458 CFAP65Q6ZU64 1925 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms