RNA–Protein interactions for RNA: ENST00000479389.1

RIPK1-203, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

TSL 3

Gene RIPK1, Length 1,481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-203ENST00000479389 PTPN23Q9H3S7 1636 aa25.47■■□□□ 1.67
RIPK1-203ENST00000479389 NCOA1Q15788 1441 aa25.46■■□□□ 1.67
RIPK1-203ENST00000479389 CEP170BQ9Y4F5 1589 aaPredicted RBP25.45■■□□□ 1.66
RIPK1-203ENST00000479389 PTPRTO14522 1441 aa25.45■■□□□ 1.66
RIPK1-203ENST00000479389 CROCC2H7BZ55 1655 aa25.44■■□□□ 1.66
RIPK1-203ENST00000479389 WASHC2CQ9Y4E1 1318 aa25.44■■□□□ 1.66
RIPK1-203ENST00000479389 EIF2AK4Q9P2K8 1649 aaKnown RBP25.43■■□□□ 1.66
RIPK1-203ENST00000479389 CERKQ8TCT0 537 aa25.43■■□□□ 1.66
RIPK1-203ENST00000479389 RNF17Q9BXT8 1623 aaKnown RBP25.43■■□□□ 1.66
RIPK1-203ENST00000479389 FGD6Q6ZV73 1430 aa25.4■■□□□ 1.66
RIPK1-203ENST00000479389 PZPP20742 1482 aa25.4■■□□□ 1.66
RIPK1-203ENST00000479389 SHANK2Q9UPX8 1470 aa25.39■■□□□ 1.66
RIPK1-203ENST00000479389 DUOX2Q9NRD8 1548 aa25.38■■□□□ 1.65
RIPK1-203ENST00000479389 ZC3H13Q5T200 1668 aaKnown RBP25.38■■□□□ 1.65
RIPK1-203ENST00000479389 DNMT1P26358 1616 aaKnown RBP25.37■■□□□ 1.65
RIPK1-203ENST00000479389 ABCC5O15440 1437 aa25.37■■□□□ 1.65
RIPK1-203ENST00000479389 TCOF1Q13428 1488 aaKnown RBP25.37■■□□□ 1.65
RIPK1-203ENST00000479389 FBXO31Q5XUX0 539 aaPredicted RBP25.36■■□□□ 1.65
RIPK1-203ENST00000479389 A2ML1A8K2U0 1454 aa25.36■■□□□ 1.65
RIPK1-203ENST00000479389 PLA2R1Q13018 1463 aa25.36■■□□□ 1.65
RIPK1-203ENST00000479389 TNRQ92752 1358 aa25.35■■□□□ 1.65
RIPK1-203ENST00000479389 DAPK1P53355 1430 aa25.34■■□□□ 1.65
RIPK1-203ENST00000479389 ABCC3O15438 1527 aa25.33■■□□□ 1.65
RIPK1-203ENST00000479389 KIF15Q9NS87 1388 aa25.33■■□□□ 1.65
RIPK1-203ENST00000479389 NCKAP5LQ9HCH0 1330 aa25.33■■□□□ 1.65
RIPK1-203ENST00000479389 MROH1Q8NDA8 1641 aa25.33■■□□□ 1.64
RIPK1-203ENST00000479389 PKD2Q13563 968 aa25.31■■□□□ 1.64
RIPK1-203ENST00000479389 CEP152O94986 1710 aa25.31■■□□□ 1.64
RIPK1-203ENST00000479389 RRP7BPQ9NSQ0 103 aa25.29■■□□□ 1.64
RIPK1-203ENST00000479389 ERBINQ96RT1 1412 aa25.28■■□□□ 1.64
RIPK1-203ENST00000479389 LTBP4Q8N2S1 1624 aa25.26■■□□□ 1.63
RIPK1-203ENST00000479389 POLR1AO95602 1720 aaPredicted RBP25.26■■□□□ 1.63
RIPK1-203ENST00000479389 NLRP1Q9C000 1473 aa25.26■■□□□ 1.63
RIPK1-203ENST00000479389 CFAP65Q6ZU64 1925 aaKnown RBP25.25■■□□□ 1.63
RIPK1-203ENST00000479389 PRDM15P57071 1507 aaPredicted RBP25.24■■□□□ 1.63
RIPK1-203ENST00000479389 ANKRD30AQ9BXX3 1397 aa25.24■■□□□ 1.63
RIPK1-203ENST00000479389 SPATA31D1Q6ZQQ2 1576 aa25.23■■□□□ 1.63
RIPK1-203ENST00000479389 CHIC2Q9UKJ5 165 aa25.23■■□□□ 1.63
RIPK1-203ENST00000479389 DEPDC5O75140 1603 aa25.22■■□□□ 1.63
RIPK1-203ENST00000479389 UGGT1Q9NYU2 1555 aa25.21■■□□□ 1.63
RIPK1-203ENST00000479389 FAM50AQ14320 339 aaKnown RBP25.21■■□□□ 1.63
RIPK1-203ENST00000479389 ERVK-7P63135 1459 aa25.2■■□□□ 1.63
RIPK1-203ENST00000479389 THEMISQ8N1K5 641 aaPredicted RBP25.19■■□□□ 1.62
RIPK1-203ENST00000479389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.17■■□□□ 1.62
RIPK1-203ENST00000479389 ZNF335Q9H4Z2 1342 aaPredicted RBP25.17■■□□□ 1.62
RIPK1-203ENST00000479389 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.17■■□□□ 1.62
RIPK1-203ENST00000479389 IQSEC2Q5JU85 1478 aa25.17■■□□□ 1.62
RIPK1-203ENST00000479389 NEURL4Q96JN8 1562 aa25.16■■□□□ 1.62
RIPK1-203ENST00000479389 KANK1Q14678 1352 aa25.16■■□□□ 1.62
RIPK1-203ENST00000479389 ADGRL2O95490 1459 aa25.16■■□□□ 1.62
RIPK1-203ENST00000479389 ARHGAP31Q2M1Z3 1444 aa25.14■■□□□ 1.62
RIPK1-203ENST00000479389 ANKLE2Q86XL3 938 aa25.14■■□□□ 1.61
RIPK1-203ENST00000479389 UBR1Q8IWV7 1749 aa25.1■■□□□ 1.61
RIPK1-203ENST00000479389 VWDEQ8N2E2 1590 aa25.09■■□□□ 1.61
RIPK1-203ENST00000479389 LMTK2Q8IWU2 1503 aa25.08■■□□□ 1.61
RIPK1-203ENST00000479389 MED14O60244 1454 aa25.06■■□□□ 1.6
RIPK1-203ENST00000479389 NPHP4O75161 1426 aaPredicted RBP25.06■■□□□ 1.6
RIPK1-203ENST00000479389 ANKRD50Q9ULJ7 1429 aa25.05■■□□□ 1.6
RIPK1-203ENST00000479389 IQGAP1P46940 1657 aa25.05■■□□□ 1.6
RIPK1-203ENST00000479389 PIK3C2BO00750 1634 aa25.01■■□□□ 1.59
RIPK1-203ENST00000479389 EFCAB6Q5THR3 1501 aa25.01■■□□□ 1.59
RIPK1-203ENST00000479389 PPARGC1BQ86YN6 1023 aaKnown RBP25■■□□□ 1.59
RIPK1-203ENST00000479389 CPS1P31327 1500 aa25■■□□□ 1.59
RIPK1-203ENST00000479389 SLIT1O75093 1534 aa24.97■■□□□ 1.59
RIPK1-203ENST00000479389 SCAF11Q99590 1463 aaKnown RBP24.96■■□□□ 1.59
RIPK1-203ENST00000479389 KDM5AP29375 1690 aaKnown RBP24.96■■□□□ 1.59
RIPK1-203ENST00000479389 SYNMO15061 1565 aa24.96■■□□□ 1.59
RIPK1-203ENST00000479389 ROCK1Q13464 1354 aa24.96■■□□□ 1.59
RIPK1-203ENST00000479389 ARHGAP23Q9P227 1491 aa24.96■■□□□ 1.59
RIPK1-203ENST00000479389 UBAP1LF5GYI3 381 aa24.96■■□□□ 1.59
RIPK1-203ENST00000479389 STAG3Q9UJ98 1225 aa24.95■■□□□ 1.58
RIPK1-203ENST00000479389 UNC13BO14795 1591 aa24.95■■□□□ 1.58
RIPK1-203ENST00000479389 TET3O43151 1660 aa24.94■■□□□ 1.58
RIPK1-203ENST00000479389 NOS1P29475 1434 aa24.93■■□□□ 1.58
RIPK1-203ENST00000479389 TXNDC2Q86VQ3 553 aa24.92■■□□□ 1.58
RIPK1-203ENST00000479389 RPRD2Q5VT52 1461 aaKnown RBP24.92■■□□□ 1.58
RIPK1-203ENST00000479389 GCC2Q8IWJ2 1684 aa24.92■■□□□ 1.58
RIPK1-203ENST00000479389 ITGAEP38570 1179 aa24.91■■□□□ 1.58
RIPK1-203ENST00000479389 IDI1Q13907 227 aa24.91■■□□□ 1.58
RIPK1-203ENST00000479389 LTKP29376 864 aa24.9■■□□□ 1.58
RIPK1-203ENST00000479389 EID1Q9Y6B2 187 aa24.9■■□□□ 1.58
RIPK1-203ENST00000479389 STRCP1A6NGW2 1772 aa24.89■■□□□ 1.58
RIPK1-203ENST00000479389 TMEM2Q9UHN6 1383 aa24.89■■□□□ 1.57
RIPK1-203ENST00000479389 ADGRB3O60242 1522 aa24.87■■□□□ 1.57
RIPK1-203ENST00000479389 SLC52A1Q9NWF4 448 aa24.86■■□□□ 1.57
RIPK1-203ENST00000479389 IQGAP3Q86VI3 1631 aa24.85■■□□□ 1.57
RIPK1-203ENST00000479389 E9PCH4 1651 aa24.83■■□□□ 1.57
RIPK1-203ENST00000479389 TOM1O60784 492 aa24.82■■□□□ 1.56
RIPK1-203ENST00000479389 MYO5BQ9ULV0 1848 aa24.81■■□□□ 1.56
RIPK1-203ENST00000479389 LRRC7Q96NW7 1537 aa24.8■■□□□ 1.56
RIPK1-203ENST00000479389 RRBP1Q9P2E9 1410 aaKnown RBP24.8■■□□□ 1.56
RIPK1-203ENST00000479389 SCAF1Q9H7N4 1312 aaKnown RBP24.79■■□□□ 1.56
RIPK1-203ENST00000479389 NUP155O75694 1391 aa24.78■■□□□ 1.56
RIPK1-203ENST00000479389 PIP4K2BP78356 416 aa24.77■■□□□ 1.56
RIPK1-203ENST00000479389 TMEM131LA2VDJ0 1609 aa24.76■■□□□ 1.55
RIPK1-203ENST00000479389 DISP3Q9P2K9 1392 aa24.74■■□□□ 1.55
RIPK1-203ENST00000479389 ALKQ9UM73 1620 aa24.71■■□□□ 1.55
RIPK1-203ENST00000479389 XIRP1Q702N8 1843 aaKnown RBP24.71■■□□□ 1.55
RIPK1-203ENST00000479389 SLC26A8Q96RN1 970 aa24.7■■□□□ 1.54
RIPK1-203ENST00000479389 ZFYVE9O95405 1425 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms