RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 CEBPAP49715 358 aaPredicted RBP18.41■□□□□ 0.54
CNKSR3-204ENST00000479339 DHX57Q6P158 1386 aaKnown RBP18.4■□□□□ 0.54
CNKSR3-204ENST00000479339 ARHGEF5Q12774 1597 aa18.4■□□□□ 0.54
CNKSR3-204ENST00000479339 ESF1Q9H501 851 aaKnown RBP18.39■□□□□ 0.53
CNKSR3-204ENST00000479339 ADGBQ8N7X0 1667 aa18.39■□□□□ 0.53
CNKSR3-204ENST00000479339 MIA2Q96PC5 1412 aa18.38■□□□□ 0.53
CNKSR3-204ENST00000479339 MYOM3Q5VTT5 1437 aa18.38■□□□□ 0.53
CNKSR3-204ENST00000479339 DHX29Q7Z478 1369 aaKnown RBP18.36■□□□□ 0.53
CNKSR3-204ENST00000479339 C3P01024 1663 aa18.35■□□□□ 0.53
CNKSR3-204ENST00000479339 HSPA2P54652 639 aa18.35■□□□□ 0.53
CNKSR3-204ENST00000479339 PREX1Q8TCU6 1659 aa18.35■□□□□ 0.53
CNKSR3-204ENST00000479339 PPP6R1Q9UPN7 881 aa18.34■□□□□ 0.53
CNKSR3-204ENST00000479339 MROH2AA6NES4 1674 aa18.34■□□□□ 0.53
CNKSR3-204ENST00000479339 TSPY4P0CV99 314 aa18.32■□□□□ 0.52
CNKSR3-204ENST00000479339 TSPY10P0CW01 314 aa18.32■□□□□ 0.52
CNKSR3-204ENST00000479339 ANO8Q9HCE9 1232 aaPredicted RBP18.32■□□□□ 0.52
CNKSR3-204ENST00000479339 UHRF1BP1Q6BDS2 1440 aa18.32■□□□□ 0.52
CNKSR3-204ENST00000479339 ZMYM3Q14202 1370 aa18.31■□□□□ 0.52
CNKSR3-204ENST00000479339 NPATQ14207 1427 aa18.3■□□□□ 0.52
CNKSR3-204ENST00000479339 GGT6Q6P531 493 aa18.3■□□□□ 0.52
CNKSR3-204ENST00000479339 SETD1BQ9UPS6 1966 aaKnown RBP18.3■□□□□ 0.52
CNKSR3-204ENST00000479339 MAST1Q9Y2H9 1570 aa18.3■□□□□ 0.52
CNKSR3-204ENST00000479339 CLTCQ00610 1675 aaKnown RBP18.27■□□□□ 0.52
CNKSR3-204ENST00000479339 KIF3BO15066 747 aa18.25■□□□□ 0.51
CNKSR3-204ENST00000479339 FAM135AQ9P2D6 1515 aa18.25■□□□□ 0.51
CNKSR3-204ENST00000479339 PTPRKQ15262 1439 aa18.24■□□□□ 0.51
CNKSR3-204ENST00000479339 CCER2I3L3R5 266 aa18.24■□□□□ 0.51
CNKSR3-204ENST00000479339 UBE2Q2Q8WVN8 375 aa18.24■□□□□ 0.51
CNKSR3-204ENST00000479339 PTPN23Q9H3S7 1636 aa18.24■□□□□ 0.51
CNKSR3-204ENST00000479339 TCOF1Q13428 1488 aaKnown RBP18.24■□□□□ 0.51
CNKSR3-204ENST00000479339 FGD6Q6ZV73 1430 aa18.24■□□□□ 0.51
CNKSR3-204ENST00000479339 ITGAEP38570 1179 aa18.23■□□□□ 0.51
CNKSR3-204ENST00000479339 SHANK2Q9UPX8 1470 aa18.22■□□□□ 0.51
CNKSR3-204ENST00000479339 ABCC5O15440 1437 aa18.21■□□□□ 0.51
CNKSR3-204ENST00000479339 ILDR1Q86SU0 546 aaPredicted RBP18.21■□□□□ 0.51
CNKSR3-204ENST00000479339 KDM5DQ9BY66 1539 aa18.2■□□□□ 0.5
CNKSR3-204ENST00000479339 RNF17Q9BXT8 1623 aaKnown RBP18.18■□□□□ 0.5
CNKSR3-204ENST00000479339 DAPK1P53355 1430 aa18.18■□□□□ 0.5
CNKSR3-204ENST00000479339 DMRT2Q9Y5R5 561 aa18.18■□□□□ 0.5
CNKSR3-204ENST00000479339 DUOX2Q9NRD8 1548 aa18.18■□□□□ 0.5
CNKSR3-204ENST00000479339 STRCQ7RTU9 1775 aa18.18■□□□□ 0.5
CNKSR3-204ENST00000479339 EIF2AK4Q9P2K8 1649 aaKnown RBP18.17■□□□□ 0.5
CNKSR3-204ENST00000479339 CROCC2H7BZ55 1655 aa18.17■□□□□ 0.5
CNKSR3-204ENST00000479339 WASHC2CQ9Y4E1 1318 aa18.17■□□□□ 0.5
CNKSR3-204ENST00000479339 DNMT1P26358 1616 aaKnown RBP18.17■□□□□ 0.5
CNKSR3-204ENST00000479339 PZPP20742 1482 aa18.16■□□□□ 0.5
CNKSR3-204ENST00000479339 NCOA1Q15788 1441 aa18.15■□□□□ 0.5
CNKSR3-204ENST00000479339 MYO3AQ8NEV4 1616 aa18.15■□□□□ 0.5
CNKSR3-204ENST00000479339 KIF15Q9NS87 1388 aa18.15■□□□□ 0.5
CNKSR3-204ENST00000479339 PTPRTO14522 1441 aa18.15■□□□□ 0.5
CNKSR3-204ENST00000479339 ZNF142P52746 1687 aaPredicted RBP18.14■□□□□ 0.49
CNKSR3-204ENST00000479339 SALL2Q9Y467 1007 aaPredicted RBP18.14■□□□□ 0.49
CNKSR3-204ENST00000479339 ERBINQ96RT1 1412 aa18.12■□□□□ 0.49
CNKSR3-204ENST00000479339 CEP170BQ9Y4F5 1589 aaPredicted RBP18.12■□□□□ 0.49
CNKSR3-204ENST00000479339 ABCC3O15438 1527 aa18.12■□□□□ 0.49
CNKSR3-204ENST00000479339 TNRQ92752 1358 aa18.12■□□□□ 0.49
CNKSR3-204ENST00000479339 CAMSAP1Q5T5Y3 1602 aa18.12■□□□□ 0.49
CNKSR3-204ENST00000479339 MROH1Q8NDA8 1641 aa18.12■□□□□ 0.49
CNKSR3-204ENST00000479339 NOP58Q9Y2X3 529 aaKnown RBP18.11■□□□□ 0.49
CNKSR3-204ENST00000479339 FBXO31Q5XUX0 539 aaPredicted RBP18.11■□□□□ 0.49
CNKSR3-204ENST00000479339 FBXO41Q8TF61 875 aa18.11■□□□□ 0.49
CNKSR3-204ENST00000479339 RRP7BPQ9NSQ0 103 aa18.11■□□□□ 0.49
CNKSR3-204ENST00000479339 A2ML1A8K2U0 1454 aa18.11■□□□□ 0.49
CNKSR3-204ENST00000479339 ZC3H13Q5T200 1668 aaKnown RBP18.1■□□□□ 0.49
CNKSR3-204ENST00000479339 ANKRD30AQ9BXX3 1397 aa18.1■□□□□ 0.49
CNKSR3-204ENST00000479339 PLA2R1Q13018 1463 aa18.1■□□□□ 0.49
CNKSR3-204ENST00000479339 ADGRL2O95490 1459 aa18.07■□□□□ 0.48
CNKSR3-204ENST00000479339 FAM50AQ14320 339 aaKnown RBP18.06■□□□□ 0.48
CNKSR3-204ENST00000479339 CERKQ8TCT0 537 aa18.06■□□□□ 0.48
CNKSR3-204ENST00000479339 PRDM15P57071 1507 aaPredicted RBP18.06■□□□□ 0.48
CNKSR3-204ENST00000479339 CHIC2Q9UKJ5 165 aa18.06■□□□□ 0.48
CNKSR3-204ENST00000479339 PKD2Q13563 968 aa18.05■□□□□ 0.48
CNKSR3-204ENST00000479339 RRBP1Q9P2E9 1410 aaKnown RBP18.05■□□□□ 0.48
CNKSR3-204ENST00000479339 NCKAP5LQ9HCH0 1330 aa18.05■□□□□ 0.48
CNKSR3-204ENST00000479339 NLRP1Q9C000 1473 aa18.05■□□□□ 0.48
CNKSR3-204ENST00000479339 PPP1R15AO75807 674 aaPredicted RBP18.04■□□□□ 0.48
CNKSR3-204ENST00000479339 SPATA31D1Q6ZQQ2 1576 aa18.03■□□□□ 0.48
CNKSR3-204ENST00000479339 DEPDC5O75140 1603 aa18.03■□□□□ 0.48
CNKSR3-204ENST00000479339 ANP32CO43423 234 aa18.03■□□□□ 0.48
CNKSR3-204ENST00000479339 RTL5Q5HYW3 569 aaPredicted RBP18.03■□□□□ 0.48
CNKSR3-204ENST00000479339 PPP4R2Q9NY27 417 aa18.03■□□□□ 0.48
CNKSR3-204ENST00000479339 ERVK-7P63135 1459 aa18.03■□□□□ 0.48
CNKSR3-204ENST00000479339 ARHGAP31Q2M1Z3 1444 aa18.02■□□□□ 0.48
CNKSR3-204ENST00000479339 CEP152O94986 1710 aa18.01■□□□□ 0.47
CNKSR3-204ENST00000479339 TRIM52Q96A61 297 aa18.01■□□□□ 0.47
CNKSR3-204ENST00000479339 KANK1Q14678 1352 aa18■□□□□ 0.47
CNKSR3-204ENST00000479339 DDX10Q13206 875 aaKnown RBP17.99■□□□□ 0.47
CNKSR3-204ENST00000479339 LMTK2Q8IWU2 1503 aa17.99■□□□□ 0.47
CNKSR3-204ENST00000479339 VWDEQ8N2E2 1590 aa17.98■□□□□ 0.47
CNKSR3-204ENST00000479339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.98■□□□□ 0.476e-7■□□□□ 11
CNKSR3-204ENST00000479339 LTBP4Q8N2S1 1624 aa17.98■□□□□ 0.47
CNKSR3-204ENST00000479339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.98■□□□□ 0.47
CNKSR3-204ENST00000479339 THEMISQ8N1K5 641 aaPredicted RBP17.98■□□□□ 0.47
CNKSR3-204ENST00000479339 UGGT1Q9NYU2 1555 aa17.97■□□□□ 0.47
CNKSR3-204ENST00000479339 ANKRD50Q9ULJ7 1429 aa17.96■□□□□ 0.47
CNKSR3-204ENST00000479339 NBR1Q14596 966 aa17.96■□□□□ 0.47
CNKSR3-204ENST00000479339 ROCK1Q13464 1354 aa17.95■□□□□ 0.46
CNKSR3-204ENST00000479339 TIMELESSQ9UNS1 1208 aa17.95■□□□□ 0.46
CNKSR3-204ENST00000479339 ANKLE2Q86XL3 938 aa17.93■□□□□ 0.46
CNKSR3-204ENST00000479339 NEURL4Q96JN8 1562 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms