RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 ARAP3Q8WWN8 1544 aa11.63□□□□□ -0.55
USP30-206ENST00000479219 LAMC1P11047 1609 aa11.63□□□□□ -0.55
USP30-206ENST00000479219 C11orf95C9JLR9 678 aaPredicted RBP11.63□□□□□ -0.55
USP30-206ENST00000479219 ERBINQ96RT1 1412 aa11.63□□□□□ -0.55
USP30-206ENST00000479219 MAGI2Q86UL8 1455 aa11.62□□□□□ -0.55
USP30-206ENST00000479219 EIF2AK4Q9P2K8 1649 aaKnown RBP11.62□□□□□ -0.55
USP30-206ENST00000479219 ERICH6BQ5W0A0 696 aa11.62□□□□□ -0.55
USP30-206ENST00000479219 CCDC144AA2RUR9 1427 aa11.61□□□□□ -0.55
USP30-206ENST00000479219 KTN1Q86UP2 1357 aaKnown RBP11.61□□□□□ -0.55
USP30-206ENST00000479219 TRPM1Q7Z4N2 1603 aa11.6□□□□□ -0.55
USP30-206ENST00000479219 BCANQ96GW7 911 aa11.6□□□□□ -0.55
USP30-206ENST00000479219 PLCH2O75038 1416 aa11.6□□□□□ -0.55
USP30-206ENST00000479219 ATP10AO60312 1499 aa11.6□□□□□ -0.55
USP30-206ENST00000479219 ABCC1P33527 1531 aa11.6□□□□□ -0.55
USP30-206ENST00000479219 MRS2Q9HD23 443 aa11.59□□□□□ -0.55
USP30-206ENST00000479219 ERCC6L2Q5T890 1561 aa11.59□□□□□ -0.55
USP30-206ENST00000479219 ZBED9Q6R2W3 1325 aa11.59□□□□□ -0.55
USP30-206ENST00000479219 DHX29Q7Z478 1369 aaKnown RBP11.58□□□□□ -0.55
USP30-206ENST00000479219 E9PCH4 1651 aa11.58□□□□□ -0.56
USP30-206ENST00000479219 CARD11Q9BXL7 1154 aa11.58□□□□□ -0.56
USP30-206ENST00000479219 ZNF326Q5BKZ1 582 aaKnown RBP11.57□□□□□ -0.56
USP30-206ENST00000479219 RBM19Q9Y4C8 960 aaKnown RBP11.57□□□□□ -0.56
USP30-206ENST00000479219 PRAG1Q86YV5 1406 aa11.56□□□□□ -0.56
USP30-206ENST00000479219 EFCAB2Q5VUJ9 269 aa11.56□□□□□ -0.56
USP30-206ENST00000479219 RTEL1-TNFRSF6BF6WH68 1400 aa11.56□□□□□ -0.56
USP30-206ENST00000479219 GPRASP1Q5JY77 1395 aa11.55□□□□□ -0.56
USP30-206ENST00000479219 DCAF11Q8TEB1 546 aa11.55□□□□□ -0.56
USP30-206ENST00000479219 PRDM15P57071 1507 aaPredicted RBP11.53□□□□□ -0.56
USP30-206ENST00000479219 DEPDC5O75140 1603 aa11.53□□□□□ -0.56
USP30-206ENST00000479219 PLA2R1Q13018 1463 aa11.52□□□□□ -0.56
USP30-206ENST00000479219 FAM9BQ8IZU0 186 aa11.52□□□□□ -0.57
USP30-206ENST00000479219 A2MP01023 1474 aa11.52□□□□□ -0.57
USP30-206ENST00000479219 RNF17Q9BXT8 1623 aaKnown RBP11.52□□□□□ -0.57
USP30-206ENST00000479219 ZFYVE16Q7Z3T8 1539 aa11.51□□□□□ -0.57
USP30-206ENST00000479219 ABCA9Q8IUA7 1624 aa11.51□□□□□ -0.57
USP30-206ENST00000479219 RALBP1Q15311 655 aa11.51□□□□□ -0.57
USP30-206ENST00000479219 CCDC184Q52MB2 194 aa11.51□□□□□ -0.57
USP30-206ENST00000479219 STAC3Q96MF2 364 aa11.51□□□□□ -0.57
USP30-206ENST00000479219 WDR7Q9Y4E6 1490 aa11.51□□□□□ -0.57
USP30-206ENST00000479219 CEP152O94986 1710 aa11.5□□□□□ -0.57
USP30-206ENST00000479219 KDM2AQ9Y2K7 1162 aa11.5□□□□□ -0.57
USP30-206ENST00000479219 BRD4O60885 1362 aaPredicted RBP11.5□□□□□ -0.57
USP30-206ENST00000479219 ST20-MTHFSA0A0A6YYL1 179 aa11.49□□□□□ -0.57
USP30-206ENST00000479219 TRPM2O94759 1503 aa11.49□□□□□ -0.57
USP30-206ENST00000479219 TET3O43151 1660 aa11.49□□□□□ -0.57
USP30-206ENST00000479219 NEURL4Q96JN8 1562 aa11.49□□□□□ -0.57
USP30-206ENST00000479219 INO80Q9ULG1 1556 aaPredicted RBP11.49□□□□□ -0.57
USP30-206ENST00000479219 SPHKAPQ2M3C7 1700 aa11.49□□□□□ -0.57
USP30-206ENST00000479219 SMG6Q86US8 1419 aaKnown RBP11.49□□□□□ -0.57
USP30-206ENST00000479219 WASHC2CQ9Y4E1 1318 aa11.48□□□□□ -0.57
USP30-206ENST00000479219 COL17A1Q9UMD9 1497 aaPredicted RBP11.48□□□□□ -0.57
USP30-206ENST00000479219 MYBBP1AQ9BQG0 1328 aaKnown RBP11.47□□□□□ -0.57
USP30-206ENST00000479219 TRAPPC8Q9Y2L5 1435 aa11.47□□□□□ -0.57
USP30-206ENST00000479219 POLR3GLQ9BT43 218 aa11.47□□□□□ -0.57
USP30-206ENST00000479219 SPAG9O60271 1321 aaKnown RBP11.47□□□□□ -0.57
USP30-206ENST00000479219 FANCIQ9NVI1 1328 aa11.47□□□□□ -0.57
USP30-206ENST00000479219 ATP7AQ04656 1500 aa11.47□□□□□ -0.57
USP30-206ENST00000479219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.46□□□□□ -0.57
USP30-206ENST00000479219 ZMYM4Q5VZL5 1548 aa11.46□□□□□ -0.57
USP30-206ENST00000479219 PPP4R2Q9NY27 417 aa11.46□□□□□ -0.57
USP30-206ENST00000479219 TMC1Q8TDI8 760 aa11.46□□□□□ -0.58
USP30-206ENST00000479219 MADDQ8WXG6 1647 aa11.45□□□□□ -0.58
USP30-206ENST00000479219 VWDEQ8N2E2 1590 aa11.45□□□□□ -0.58
USP30-206ENST00000479219 KIAA1210Q9ULL0 1709 aa11.45□□□□□ -0.58
USP30-206ENST00000479219 IQGAP1P46940 1657 aa11.45□□□□□ -0.58
USP30-206ENST00000479219 FANCAO15360 1455 aa11.45□□□□□ -0.58
USP30-206ENST00000479219 LRPPRCP42704 1394 aaKnown RBP11.45□□□□□ -0.58
USP30-206ENST00000479219 KANK1Q14678 1352 aa11.45□□□□□ -0.58
USP30-206ENST00000479219 PTPRTO14522 1441 aa11.44□□□□□ -0.58
USP30-206ENST00000479219 INSRP06213 1382 aa11.44□□□□□ -0.58
USP30-206ENST00000479219 CFAP74Q9C0B2 1584 aa11.44□□□□□ -0.58
USP30-206ENST00000479219 PNISRQ8TF01 805 aaKnown RBP11.44□□□□□ -0.58
USP30-206ENST00000479219 PARD3Q8TEW0 1356 aa11.43□□□□□ -0.58
USP30-206ENST00000479219 MSH5O43196 834 aa11.43□□□□□ -0.58
USP30-206ENST00000479219 MYT1LQ9UL68 1186 aa11.43□□□□□ -0.58
USP30-206ENST00000479219 NUDCQ9Y266 331 aa11.42□□□□□ -0.58
USP30-206ENST00000479219 SCAPERQ9BY12 1400 aa11.42□□□□□ -0.58
USP30-206ENST00000479219 TMF1P82094 1093 aa11.42□□□□□ -0.58
USP30-206ENST00000479219 RGL3Q3MIN7 710 aa11.42□□□□□ -0.58
USP30-206ENST00000479219 NLRP13Q86W25 1043 aa11.42□□□□□ -0.58
USP30-206ENST00000479219 CLTCL1P53675 1640 aa11.41□□□□□ -0.58
USP30-206ENST00000479219 ADGRL1O94910 1474 aa11.41□□□□□ -0.58
USP30-206ENST00000479219 CDCA8Q53HL2 280 aa11.39□□□□□ -0.59
USP30-206ENST00000479219 OSCARQ8IYS5 282 aa11.39□□□□□ -0.59
USP30-206ENST00000479219 KIF1BO60333 1816 aa11.39□□□□□ -0.59
USP30-206ENST00000479219 TESK2Q96S53 571 aa11.39□□□□□ -0.59
USP30-206ENST00000479219 RIMBP3CA6NJZ7 1639 aa11.39□□□□□ -0.59
USP30-206ENST00000479219 RIMBP3BA6NNM3 1639 aa11.39□□□□□ -0.59
USP30-206ENST00000479219 RIMBP3Q9UFD9 1639 aa11.39□□□□□ -0.59
USP30-206ENST00000479219 RNF123Q5XPI4 1314 aa11.39□□□□□ -0.59
USP30-206ENST00000479219 SYNMO15061 1565 aa11.39□□□□□ -0.59
USP30-206ENST00000479219 EIF3AQ14152 1382 aaKnown RBP11.39□□□□□ -0.59
USP30-206ENST00000479219 NBPF1Q3BBV0 1214 aa11.39□□□□□ -0.59
USP30-206ENST00000479219 SCAF11Q99590 1463 aaKnown RBP11.38□□□□□ -0.59
USP30-206ENST00000479219 ZNF518AQ6AHZ1 1483 aa11.38□□□□□ -0.59
USP30-206ENST00000479219 EFCAB6Q5THR3 1501 aa11.37□□□□□ -0.59
USP30-206ENST00000479219 LMTK2Q8IWU2 1503 aa11.37□□□□□ -0.59
USP30-206ENST00000479219 ASXL2Q76L83 1435 aa11.37□□□□□ -0.59
USP30-206ENST00000479219 MROH1Q8NDA8 1641 aa11.37□□□□□ -0.59
USP30-206ENST00000479219 MYOM2P54296 1465 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms