RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 JPH4Q96JJ6 628 aa4.5□□□□□ -1.69
PDE1C-208ENST00000478736 SPDYE16A6NNV3 312 aaPredicted RBP4.49□□□□□ -1.69
PDE1C-208ENST00000478736 PHF14O94880 888 aa4.49□□□□□ -1.69
PDE1C-208ENST00000478736 PROX2Q3B8N5 592 aa4.49□□□□□ -1.69
PDE1C-208ENST00000478736 KCNK17Q96T54 332 aa4.49□□□□□ -1.69
PDE1C-208ENST00000478736 NPDC1Q9NQX5 325 aaPredicted RBP4.49□□□□□ -1.69
PDE1C-208ENST00000478736 C6orf132Q5T0Z8 1188 aa4.48□□□□□ -1.69
PDE1C-208ENST00000478736 TYW1BQ6NUM6 668 aa4.48□□□□□ -1.69
PDE1C-208ENST00000478736 ANKRD13DQ6ZTN6 518 aa4.48□□□□□ -1.69
PDE1C-208ENST00000478736 P3H3Q8IVL6 736 aa4.48□□□□□ -1.69
PDE1C-208ENST00000478736 FAM198AQ9UFP1 575 aa4.48□□□□□ -1.69
PDE1C-208ENST00000478736 ARHGAP33O14559 1287 aa4.47□□□□□ -1.69
PDE1C-208ENST00000478736 EN1Q05925 392 aaPredicted RBP4.47□□□□□ -1.69
PDE1C-208ENST00000478736 PPP4R3BQ5MIZ7 849 aa4.47□□□□□ -1.69
PDE1C-208ENST00000478736 IRX2Q9BZI1 471 aaPredicted RBP4.47□□□□□ -1.69
PDE1C-208ENST00000478736 BCL2L12Q9HB09 334 aa4.47□□□□□ -1.69
PDE1C-208ENST00000478736 MAP3K7O43318 606 aa4.46□□□□□ -1.7
PDE1C-208ENST00000478736 FECHP22830 423 aa4.46□□□□□ -1.7
PDE1C-208ENST00000478736 FAM161AQ3B820 660 aa4.46□□□□□ -1.7
PDE1C-208ENST00000478736 LSM11P83369 360 aaKnown RBP eCLIP4.45□□□□□ -1.7
PDE1C-208ENST00000478736 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.45□□□□□ -1.7
PDE1C-208ENST00000478736 EPAS1Q99814 870 aa4.45□□□□□ -1.7
PDE1C-208ENST00000478736 ZBED2Q9BTP6 218 aa4.45□□□□□ -1.7
PDE1C-208ENST00000478736 SMAPO00193 183 aa4.44□□□□□ -1.7
PDE1C-208ENST00000478736 GPR37O15354 613 aa4.44□□□□□ -1.7
PDE1C-208ENST00000478736 PTPREP23469 700 aa4.44□□□□□ -1.7
PDE1C-208ENST00000478736 TSKSQ9UJT2 592 aa4.44□□□□□ -1.7
PDE1C-208ENST00000478736 VPS9D1Q9Y2B5 631 aa4.44□□□□□ -1.7
PDE1C-208ENST00000478736 NUTM2FA1L443 756 aa4.43□□□□□ -1.7
PDE1C-208ENST00000478736 PSDA5PKW4 1024 aaPredicted RBP4.43□□□□□ -1.7
PDE1C-208ENST00000478736 ADGRD1Q6QNK2 874 aa4.43□□□□□ -1.7
PDE1C-208ENST00000478736 FBXW7Q969H0 707 aa4.43□□□□□ -1.7
PDE1C-208ENST00000478736 HRO43593 1189 aa4.42□□□□□ -1.7
PDE1C-208ENST00000478736 PTGDRQ13258 359 aa4.42□□□□□ -1.7
PDE1C-208ENST00000478736 KIAA1468Q9P260 1216 aa4.42□□□□□ -1.7
PDE1C-208ENST00000478736 PPP1R3GB7ZBB8 358 aa4.41□□□□□ -1.7
PDE1C-208ENST00000478736 BHMG1C9JSJ3 638 aaPredicted RBP4.41□□□□□ -1.7
PDE1C-208ENST00000478736 LMOD2Q6P5Q4 547 aa4.41□□□□□ -1.7
PDE1C-208ENST00000478736 PADI6Q6TGC4 694 aa4.41□□□□□ -1.7
PDE1C-208ENST00000478736 NLRP7Q8WX94 980 aa4.41□□□□□ -1.7
PDE1C-208ENST00000478736 CDCA7LQ96GN5 454 aa4.41□□□□□ -1.7
PDE1C-208ENST00000478736 SEPT9Q9UHD8 586 aaPredicted RBP4.41□□□□□ -1.7
PDE1C-208ENST00000478736 PBX2P40425 430 aa4.4□□□□□ -1.71
PDE1C-208ENST00000478736 PRSS12P56730 875 aa4.4□□□□□ -1.71
PDE1C-208ENST00000478736 TRIM6-TRIM34B2RNG4 842 aa4.39□□□□□ -1.71
PDE1C-208ENST00000478736 TTC13Q8NBP0 860 aa4.39□□□□□ -1.71
PDE1C-208ENST00000478736 PHOX2BQ99453 314 aa4.39□□□□□ -1.71
PDE1C-208ENST00000478736 NUDT18Q6ZVK8 323 aa4.38□□□□□ -1.71
PDE1C-208ENST00000478736 GPIHBP1Q8IV16 184 aa4.38□□□□□ -1.71
PDE1C-208ENST00000478736 ZC3H15Q8WU90 426 aaKnown RBP4.38□□□□□ -1.71
PDE1C-208ENST00000478736 TK2O00142 265 aa4.37□□□□□ -1.71
PDE1C-208ENST00000478736 PRKCSHP14314 528 aaPredicted RBP4.37□□□□□ -1.71
PDE1C-208ENST00000478736 SLC4A5Q9BY07 1137 aa4.37□□□□□ -1.71
PDE1C-208ENST00000478736 HCSTQ9UBK5 93 aa4.37□□□□□ -1.71
PDE1C-208ENST00000478736 SMYD5Q6GMV2 418 aa4.36□□□□□ -1.71
PDE1C-208ENST00000478736 TATDN2Q93075 761 aa4.36□□□□□ -1.71
PDE1C-208ENST00000478736 BCANQ96GW7 911 aa4.36□□□□□ -1.71
PDE1C-208ENST00000478736 EYA1Q99502 592 aa4.36□□□□□ -1.71
PDE1C-208ENST00000478736 RABGEF1Q9UJ41 708 aa4.36□□□□□ -1.71
PDE1C-208ENST00000478736 PNMA3Q9UL41 463 aa4.36□□□□□ -1.71
PDE1C-208ENST00000478736 GNPATO15228 680 aa4.35□□□□□ -1.71
PDE1C-208ENST00000478736 FCHSD2O94868 740 aa4.35□□□□□ -1.71
PDE1C-208ENST00000478736 KCTD12Q96CX2 325 aaKnown RBP4.35□□□□□ -1.71
PDE1C-208ENST00000478736 ADGRG1Q9Y653 693 aa4.35□□□□□ -1.71
PDE1C-208ENST00000478736 ONECUT3O60422 494 aaPredicted RBP4.34□□□□□ -1.71
PDE1C-208ENST00000478736 ZMYND10O75800 440 aa4.34□□□□□ -1.71
PDE1C-208ENST00000478736 RGS20O76081 388 aa4.34□□□□□ -1.71
PDE1C-208ENST00000478736 BCAMP50895 628 aa4.34□□□□□ -1.71
PDE1C-208ENST00000478736 HIC1Q14526 733 aa4.34□□□□□ -1.71
PDE1C-208ENST00000478736 Q6ZNB5 142 aa4.34□□□□□ -1.71
PDE1C-208ENST00000478736 KCNH8Q96L42 1107 aa4.34□□□□□ -1.71
PDE1C-208ENST00000478736 PTPN5P54829 565 aa4.33□□□□□ -1.72
PDE1C-208ENST00000478736 PACS2Q86VP3 889 aa4.33□□□□□ -1.72
PDE1C-208ENST00000478736 MRPL50Q8N5N7 158 aaKnown RBP4.33□□□□□ -1.72
PDE1C-208ENST00000478736 CERKQ8TCT0 537 aa4.33□□□□□ -1.72
PDE1C-208ENST00000478736 ZFRQ96KR1 1074 aaKnown RBP4.33□□□□□ -1.72
PDE1C-208ENST00000478736 REPIN1Q9BWE0 567 aaKnown RBP4.33□□□□□ -1.72
PDE1C-208ENST00000478736 RCCD1A6NED2 376 aa4.32□□□□□ -1.72
PDE1C-208ENST00000478736 BARGINQ6ZT62 677 aa4.32□□□□□ -1.72
PDE1C-208ENST00000478736 SAMD7Q7Z3H4 446 aa4.32□□□□□ -1.72
PDE1C-208ENST00000478736 PXYLP1Q8TE99 480 aa4.32□□□□□ -1.72
PDE1C-208ENST00000478736 WNT2BQ93097 391 aa4.32□□□□□ -1.72
PDE1C-208ENST00000478736 SLC24A3Q9HC58 644 aa4.32□□□□□ -1.72
PDE1C-208ENST00000478736 LOC100996750A0A140TA64 210 aa4.31□□□□□ -1.72
PDE1C-208ENST00000478736 IRF6O14896 467 aa4.31□□□□□ -1.72
PDE1C-208ENST00000478736 SWT1Q5T5J6 900 aaKnown RBP4.31□□□□□ -1.72
PDE1C-208ENST00000478736 METTL3Q86U44 580 aaKnown RBP4.31□□□□□ -1.72
PDE1C-208ENST00000478736 CCDC102AQ96A19 550 aa4.31□□□□□ -1.72
PDE1C-208ENST00000478736 KRTAP4-6Q9BYQ5 205 aa4.31□□□□□ -1.72
PDE1C-208ENST00000478736 SLC10A3P09131 477 aa4.3□□□□□ -1.72
PDE1C-208ENST00000478736 FAM98CQ17RN3 349 aaKnown RBP4.3□□□□□ -1.72
PDE1C-208ENST00000478736 TPRNQ4KMQ1 711 aa4.3□□□□□ -1.72
PDE1C-208ENST00000478736 THSD4Q6ZMP0 1018 aa4.3□□□□□ -1.72
PDE1C-208ENST00000478736 WBP1LQ9NX94 342 aa4.3□□□□□ -1.72
PDE1C-208ENST00000478736 RBM27Q9P2N5 1060 aaKnown RBP4.3□□□□□ -1.72
PDE1C-208ENST00000478736 NBPF26B4DH59 902 aa4.29□□□□□ -1.72
PDE1C-208ENST00000478736 TULP1O00294 542 aaPredicted RBP4.29□□□□□ -1.72
PDE1C-208ENST00000478736 MAP2K5Q13163 448 aa4.29□□□□□ -1.72
PDE1C-208ENST00000478736 KRI1Q8N9T8 703 aaKnown RBP4.29□□□□□ -1.72
PDE1C-208ENST00000478736 STAC3Q96MF2 364 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms