RNA–Protein interactions for RNA: ENST00000478678.5

PBX2-202, Transcript of PBX homeobox 2, humanhuman

TSL 1 (best)

Gene PBX2, Length 1,320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX2-202ENST00000478678 TCOF1Q13428 1488 aaKnown RBP34.73■■■■□ 3.15
PBX2-202ENST00000478678 RNF17Q9BXT8 1623 aaKnown RBP34.72■■■■□ 3.15
PBX2-202ENST00000478678 ZNF142P52746 1687 aaPredicted RBP34.71■■■■□ 3.15
PBX2-202ENST00000478678 DNMT1P26358 1616 aaKnown RBP34.71■■■■□ 3.15
PBX2-202ENST00000478678 CAMSAP1Q5T5Y3 1602 aa34.71■■■■□ 3.15
PBX2-202ENST00000478678 DAPK1P53355 1430 aa34.7■■■■□ 3.14
PBX2-202ENST00000478678 CEP170BQ9Y4F5 1589 aaPredicted RBP34.7■■■■□ 3.14
PBX2-202ENST00000478678 FBXO31Q5XUX0 539 aaPredicted RBP34.69■■■■□ 3.14
PBX2-202ENST00000478678 NCOA1Q15788 1441 aa34.69■■■■□ 3.14
PBX2-202ENST00000478678 SHANK2Q9UPX8 1470 aa34.69■■■■□ 3.14
PBX2-202ENST00000478678 MROH1Q8NDA8 1641 aa34.68■■■■□ 3.14
PBX2-202ENST00000478678 EIF2AK4Q9P2K8 1649 aaKnown RBP34.68■■■■□ 3.14
PBX2-202ENST00000478678 WASHC2CQ9Y4E1 1318 aa34.68■■■■□ 3.14
PBX2-202ENST00000478678 FAM135AQ9P2D6 1515 aa34.65■■■■□ 3.14
PBX2-202ENST00000478678 PZPP20742 1482 aa34.64■■■■□ 3.14
PBX2-202ENST00000478678 DUOX2Q9NRD8 1548 aa34.64■■■■□ 3.14
PBX2-202ENST00000478678 KIF15Q9NS87 1388 aa34.64■■■■□ 3.14
PBX2-202ENST00000478678 ABCC3O15438 1527 aa34.63■■■■□ 3.13
PBX2-202ENST00000478678 RRP7BPQ9NSQ0 103 aa34.62■■■■□ 3.13
PBX2-202ENST00000478678 CEP152O94986 1710 aa34.61■■■■□ 3.13
PBX2-202ENST00000478678 CHIC2Q9UKJ5 165 aa34.6■■■■□ 3.13
PBX2-202ENST00000478678 TNRQ92752 1358 aa34.58■■■■□ 3.13
PBX2-202ENST00000478678 NCKAP5LQ9HCH0 1330 aa34.58■■■■□ 3.13
PBX2-202ENST00000478678 PTPRTO14522 1441 aa34.57■■■■□ 3.12
PBX2-202ENST00000478678 ZC3H13Q5T200 1668 aaKnown RBP34.57■■■■□ 3.12
PBX2-202ENST00000478678 DMRT2Q9Y5R5 561 aa34.56■■■■□ 3.12
PBX2-202ENST00000478678 A2ML1A8K2U0 1454 aa34.56■■■■□ 3.12
PBX2-202ENST00000478678 FAM50AQ14320 339 aaKnown RBP34.55■■■■□ 3.12
PBX2-202ENST00000478678 CERKQ8TCT0 537 aa34.54■■■■□ 3.12
PBX2-202ENST00000478678 PPARGC1BQ86YN6 1023 aaKnown RBP34.53■■■■□ 3.12
PBX2-202ENST00000478678 ERBINQ96RT1 1412 aa34.52■■■■□ 3.12
PBX2-202ENST00000478678 CFAP65Q6ZU64 1925 aaKnown RBP34.49■■■■□ 3.11
PBX2-202ENST00000478678 PRDM15P57071 1507 aaPredicted RBP34.49■■■■□ 3.11
PBX2-202ENST00000478678 PLA2R1Q13018 1463 aa34.49■■■■□ 3.11
PBX2-202ENST00000478678 ANKRD30AQ9BXX3 1397 aa34.46■■■■□ 3.11
PBX2-202ENST00000478678 DEPDC5O75140 1603 aa34.45■■■■□ 3.11
PBX2-202ENST00000478678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.44■■■■□ 3.13e-6■■■■□ 20.1
PBX2-202ENST00000478678 SPATA31D1Q6ZQQ2 1576 aa34.44■■■■□ 3.1
PBX2-202ENST00000478678 ERVK-7P63135 1459 aa34.43■■■■□ 3.1
PBX2-202ENST00000478678 LTBP4Q8N2S1 1624 aa34.42■■■■□ 3.1
PBX2-202ENST00000478678 ADGRL2O95490 1459 aa34.41■■■■□ 3.1
PBX2-202ENST00000478678 POLR1AO95602 1720 aaPredicted RBP34.38■■■■□ 3.09
PBX2-202ENST00000478678 NLRP1Q9C000 1473 aa34.38■■■■□ 3.09
PBX2-202ENST00000478678 PKD2Q13563 968 aa34.36■■■■□ 3.09
PBX2-202ENST00000478678 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.36■■■■□ 3.091e-51■■□□□ 12.4
PBX2-202ENST00000478678 NEURL4Q96JN8 1562 aa34.36■■■■□ 3.09
PBX2-202ENST00000478678 UGGT1Q9NYU2 1555 aa34.36■■■■□ 3.09
PBX2-202ENST00000478678 ZNF335Q9H4Z2 1342 aaPredicted RBP34.33■■■■□ 3.09
PBX2-202ENST00000478678 VWDEQ8N2E2 1590 aa34.3■■■■□ 3.08
PBX2-202ENST00000478678 ARHGAP31Q2M1Z3 1444 aa34.28■■■■□ 3.08
PBX2-202ENST00000478678 KANK1Q14678 1352 aa34.26■■■■□ 3.08
PBX2-202ENST00000478678 ANKRD50Q9ULJ7 1429 aa34.25■■■■□ 3.07
PBX2-202ENST00000478678 UBR1Q8IWV7 1749 aa34.25■■■■□ 3.07
PBX2-202ENST00000478678 THEMISQ8N1K5 641 aaPredicted RBP34.24■■■■□ 3.07
PBX2-202ENST00000478678 LMTK2Q8IWU2 1503 aa34.23■■■■□ 3.07
PBX2-202ENST00000478678 ITGAEP38570 1179 aa34.23■■■■□ 3.07
PBX2-202ENST00000478678 EFCAB6Q5THR3 1501 aa34.19■■■■□ 3.06
PBX2-202ENST00000478678 ANKLE2Q86XL3 938 aa34.19■■■■□ 3.06
PBX2-202ENST00000478678 PIK3C2BO00750 1634 aa34.17■■■■□ 3.06
PBX2-202ENST00000478678 SYNMO15061 1565 aa34.16■■■■□ 3.06
PBX2-202ENST00000478678 NPHP4O75161 1426 aaPredicted RBP34.15■■■■□ 3.06
PBX2-202ENST00000478678 IQGAP1P46940 1657 aa34.13■■■■□ 3.05
PBX2-202ENST00000478678 UNC13BO14795 1591 aa34.12■■■■□ 3.05
PBX2-202ENST00000478678 MED14O60244 1454 aa34.11■■■■□ 3.05
PBX2-202ENST00000478678 ROCK1Q13464 1354 aa34.1■■■■□ 3.05
PBX2-202ENST00000478678 IQSEC2Q5JU85 1478 aa34.09■■■■□ 3.05
PBX2-202ENST00000478678 NOS1P29475 1434 aa34.06■■■■□ 3.04
PBX2-202ENST00000478678 TET3O43151 1660 aa34.06■■■■□ 3.04
PBX2-202ENST00000478678 ARHGAP23Q9P227 1491 aa34.05■■■■□ 3.04
PBX2-202ENST00000478678 SCAF11Q99590 1463 aaKnown RBP34.04■■■■□ 3.04
PBX2-202ENST00000478678 LTKP29376 864 aa34.04■■■■□ 3.04
PBX2-202ENST00000478678 IDI1Q13907 227 aa34.04■■■■□ 3.04
PBX2-202ENST00000478678 SLIT1O75093 1534 aa34.03■■■■□ 3.04
PBX2-202ENST00000478678 GCC2Q8IWJ2 1684 aa34.02■■■■□ 3.04
PBX2-202ENST00000478678 RRBP1Q9P2E9 1410 aaKnown RBP34.01■■■■□ 3.03
PBX2-202ENST00000478678 STRCP1A6NGW2 1772 aa34.01■■■■□ 3.03
PBX2-202ENST00000478678 STAG3Q9UJ98 1225 aa33.98■■■■□ 3.03
PBX2-202ENST00000478678 E9PCH4 1651 aa33.97■■■■□ 3.03
PBX2-202ENST00000478678 TXNDC2Q86VQ3 553 aa33.97■■■■□ 3.03
PBX2-202ENST00000478678 IQGAP3Q86VI3 1631 aa33.97■■■■□ 3.03
PBX2-202ENST00000478678 CPS1P31327 1500 aa33.97■■■■□ 3.03
PBX2-202ENST00000478678 ADGRB3O60242 1522 aa33.96■■■■□ 3.03
PBX2-202ENST00000478678 RPRD2Q5VT52 1461 aaKnown RBP33.95■■■■□ 3.03
PBX2-202ENST00000478678 TMEM2Q9UHN6 1383 aa33.95■■■■□ 3.03
PBX2-202ENST00000478678 KDM5AP29375 1690 aaKnown RBP33.94■■■■□ 3.02
PBX2-202ENST00000478678 UBAP1LF5GYI3 381 aa33.94■■■■□ 3.02
PBX2-202ENST00000478678 MYO5BQ9ULV0 1848 aa33.94■■■■□ 3.02
PBX2-202ENST00000478678 NUP155O75694 1391 aa33.9■■■■□ 3.02
PBX2-202ENST00000478678 EID1Q9Y6B2 187 aa33.87■■■■□ 3.01
PBX2-202ENST00000478678 SENP3Q9H4L4 574 aaPredicted RBP33.84■■■■□ 3.01
PBX2-202ENST00000478678 SLC52A1Q9NWF4 448 aa33.84■■■■□ 3.01
PBX2-202ENST00000478678 TMEM131LA2VDJ0 1609 aa33.82■■■■□ 3
PBX2-202ENST00000478678 LRRC7Q96NW7 1537 aa33.81■■■■□ 3
PBX2-202ENST00000478678 NAIPQ13075 1403 aa33.79■■■■□ 3
PBX2-202ENST00000478678 ALKQ9UM73 1620 aa33.78■■■■□ 3
PBX2-202ENST00000478678 CHGAP10645 457 aaKnown RBP33.76■■■□□ 2.99
PBX2-202ENST00000478678 ZFYVE9O95405 1425 aa33.75■■■□□ 2.99
PBX2-202ENST00000478678 PIP4K2BP78356 416 aa33.75■■■□□ 2.99
PBX2-202ENST00000478678 SLC26A8Q96RN1 970 aa33.75■■■□□ 2.99
PBX2-202ENST00000478678 SCAF1Q9H7N4 1312 aaKnown RBP33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms