RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 PLXNC1O60486 1568 aa17.79■□□□□ 0.44
PDCD11-204ENST00000478543 SYCP2Q9BX26 1530 aa17.77■□□□□ 0.43
PDCD11-204ENST00000478543 NEURL4Q96JN8 1562 aa17.76■□□□□ 0.43
PDCD11-204ENST00000478543 PKD2Q13563 968 aa17.76■□□□□ 0.43
PDCD11-204ENST00000478543 ITGAEP38570 1179 aa17.75■□□□□ 0.43
PDCD11-204ENST00000478543 PIP4K2BP78356 416 aa17.75■□□□□ 0.43
PDCD11-204ENST00000478543 DNMT1P26358 1616 aaKnown RBP17.75■□□□□ 0.43
PDCD11-204ENST00000478543 INO80Q9ULG1 1556 aaPredicted RBP17.74■□□□□ 0.43
PDCD11-204ENST00000478543 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
PDCD11-204ENST00000478543 PCGF6Q9BYE7 350 aa17.73■□□□□ 0.43
PDCD11-204ENST00000478543 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
PDCD11-204ENST00000478543 ATP7AQ04656 1500 aa17.72■□□□□ 0.43
PDCD11-204ENST00000478543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.71■□□□□ 0.43
PDCD11-204ENST00000478543 POLR1AO95602 1720 aaPredicted RBP17.7■□□□□ 0.42
PDCD11-204ENST00000478543 HNRNPMP52272 730 aaKnown RBP eCLIP17.7■□□□□ 0.42
PDCD11-204ENST00000478543 PLEKHH2Q8IVE3 1493 aa17.69■□□□□ 0.42
PDCD11-204ENST00000478543 A2ML1A8K2U0 1454 aa17.69■□□□□ 0.42
PDCD11-204ENST00000478543 A2MP01023 1474 aa17.69■□□□□ 0.42
PDCD11-204ENST00000478543 VWDEQ8N2E2 1590 aa17.68■□□□□ 0.42
PDCD11-204ENST00000478543 SHANK2Q9UPX8 1470 aa17.68■□□□□ 0.42
PDCD11-204ENST00000478543 SPAG9O60271 1321 aaKnown RBP17.68■□□□□ 0.42
PDCD11-204ENST00000478543 CPS1P31327 1500 aa17.67■□□□□ 0.42
PDCD11-204ENST00000478543 DAPK1P53355 1430 aa17.67■□□□□ 0.42
PDCD11-204ENST00000478543 GGT6Q6P531 493 aa17.66■□□□□ 0.42
PDCD11-204ENST00000478543 ARHGEF5Q12774 1597 aa17.66■□□□□ 0.42
PDCD11-204ENST00000478543 ABCC5O15440 1437 aa17.65■□□□□ 0.42
PDCD11-204ENST00000478543 KIAA1107Q9UPP5 1409 aa17.65■□□□□ 0.42
PDCD11-204ENST00000478543 MBD5Q9P267 1494 aa17.65■□□□□ 0.42
PDCD11-204ENST00000478543 CROCC2H7BZ55 1655 aa17.64■□□□□ 0.42
PDCD11-204ENST00000478543 CCDC141Q6ZP82 1450 aa17.64■□□□□ 0.41
PDCD11-204ENST00000478543 STRCP1A6NGW2 1772 aa17.63■□□□□ 0.41
PDCD11-204ENST00000478543 TOM1O60784 492 aa17.63■□□□□ 0.41
PDCD11-204ENST00000478543 CHIC2Q9UKJ5 165 aa17.63■□□□□ 0.41
PDCD11-204ENST00000478543 FBXO31Q5XUX0 539 aaPredicted RBP17.61■□□□□ 0.41
PDCD11-204ENST00000478543 RGS17Q9UGC6 210 aaPredicted RBP17.61■□□□□ 0.41
PDCD11-204ENST00000478543 PHF23Q9BUL5 403 aaPredicted RBP17.6■□□□□ 0.41
PDCD11-204ENST00000478543 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
PDCD11-204ENST00000478543 ADGBQ8N7X0 1667 aa17.6■□□□□ 0.41
PDCD11-204ENST00000478543 RSPH4AQ5TD94 716 aa17.58■□□□□ 0.4
PDCD11-204ENST00000478543 TSPY4P0CV99 314 aa17.57■□□□□ 0.4
PDCD11-204ENST00000478543 TSPY10P0CW01 314 aa17.57■□□□□ 0.4
PDCD11-204ENST00000478543 TNRQ92752 1358 aa17.55■□□□□ 0.4
PDCD11-204ENST00000478543 MAST1Q9Y2H9 1570 aa17.55■□□□□ 0.4
PDCD11-204ENST00000478543 LRRC7Q96NW7 1537 aa17.54■□□□□ 0.4
PDCD11-204ENST00000478543 RRP7BPQ9NSQ0 103 aa17.54■□□□□ 0.4
PDCD11-204ENST00000478543 MED14O60244 1454 aa17.54■□□□□ 0.4
PDCD11-204ENST00000478543 PZPP20742 1482 aa17.54■□□□□ 0.4
PDCD11-204ENST00000478543 DEPDC5O75140 1603 aa17.53■□□□□ 0.4
PDCD11-204ENST00000478543 IQGAP1P46940 1657 aa17.52■□□□□ 0.4
PDCD11-204ENST00000478543 ADGRL2O95490 1459 aa17.52■□□□□ 0.4
PDCD11-204ENST00000478543 NPHP4O75161 1426 aaPredicted RBP17.52■□□□□ 0.4
PDCD11-204ENST00000478543 ANKRD30AQ9BXX3 1397 aa17.52■□□□□ 0.39
PDCD11-204ENST00000478543 RNF17Q9BXT8 1623 aaKnown RBP17.51■□□□□ 0.39
PDCD11-204ENST00000478543 ROCK1Q13464 1354 aa17.51■□□□□ 0.39
PDCD11-204ENST00000478543 UGGT1Q9NYU2 1555 aa17.5■□□□□ 0.39
PDCD11-204ENST00000478543 KDM5DQ9BY66 1539 aa17.5■□□□□ 0.39
PDCD11-204ENST00000478543 GCC2Q8IWJ2 1684 aa17.49■□□□□ 0.39
PDCD11-204ENST00000478543 DHX29Q7Z478 1369 aaKnown RBP17.49■□□□□ 0.39
PDCD11-204ENST00000478543 HFM1A2PYH4 1435 aa17.48■□□□□ 0.39
PDCD11-204ENST00000478543 RTEL1-TNFRSF6BF6WH68 1400 aa17.48■□□□□ 0.39
PDCD11-204ENST00000478543 NAIPQ13075 1403 aa17.48■□□□□ 0.39
PDCD11-204ENST00000478543 ANKLE2Q86XL3 938 aa17.48■□□□□ 0.39
PDCD11-204ENST00000478543 ZC3H13Q5T200 1668 aaKnown RBP17.48■□□□□ 0.39
PDCD11-204ENST00000478543 SETD5Q9C0A6 1442 aa17.47■□□□□ 0.39
PDCD11-204ENST00000478543 KIF15Q9NS87 1388 aa17.47■□□□□ 0.39
PDCD11-204ENST00000478543 SYNMO15061 1565 aa17.47■□□□□ 0.39
PDCD11-204ENST00000478543 XIRP1Q702N8 1843 aaKnown RBP17.47■□□□□ 0.39
PDCD11-204ENST00000478543 NLRP1Q9C000 1473 aa17.45■□□□□ 0.38
PDCD11-204ENST00000478543 KIF3BO15066 747 aa17.44■□□□□ 0.38
PDCD11-204ENST00000478543 POTEAQ6S8J7 498 aa17.44■□□□□ 0.38
PDCD11-204ENST00000478543 RAB3GAP2Q9H2M9 1393 aa17.43■□□□□ 0.38
PDCD11-204ENST00000478543 FAM135AQ9P2D6 1515 aa17.43■□□□□ 0.38
PDCD11-204ENST00000478543 THEMISQ8N1K5 641 aaPredicted RBP17.43■□□□□ 0.38
PDCD11-204ENST00000478543 SETD1AO15047 1707 aaKnown RBP17.42■□□□□ 0.38
PDCD11-204ENST00000478543 DUOX2Q9NRD8 1548 aa17.42■□□□□ 0.38
PDCD11-204ENST00000478543 ANKRD50Q9ULJ7 1429 aa17.4■□□□□ 0.38
PDCD11-204ENST00000478543 WASHC2CQ9Y4E1 1318 aa17.4■□□□□ 0.38
PDCD11-204ENST00000478543 UBR1Q8IWV7 1749 aa17.38■□□□□ 0.37
PDCD11-204ENST00000478543 ERBINQ96RT1 1412 aa17.36■□□□□ 0.37
PDCD11-204ENST00000478543 ABCC3O15438 1527 aa17.36■□□□□ 0.37
PDCD11-204ENST00000478543 ERVK-7P63135 1459 aa17.34■□□□□ 0.37
PDCD11-204ENST00000478543 MROH1Q8NDA8 1641 aa17.33■□□□□ 0.37
PDCD11-204ENST00000478543 LTKP29376 864 aa17.33■□□□□ 0.36
PDCD11-204ENST00000478543 TRIM52Q96A61 297 aa17.33■□□□□ 0.36
PDCD11-204ENST00000478543 SRCAPQ6ZRS2 3230 aa17.33■□□□□ 0.36
PDCD11-204ENST00000478543 EIF2AK4Q9P2K8 1649 aaKnown RBP17.32■□□□□ 0.36
PDCD11-204ENST00000478543 SCAF11Q99590 1463 aaKnown RBP17.31■□□□□ 0.36
PDCD11-204ENST00000478543 ARHGAP23Q9P227 1491 aa17.31■□□□□ 0.36
PDCD11-204ENST00000478543 ROBO1Q9Y6N7 1651 aa17.3■□□□□ 0.36
PDCD11-204ENST00000478543 HRCP23327 699 aa17.3■□□□□ 0.36
PDCD11-204ENST00000478543 CEP152O94986 1710 aa17.3■□□□□ 0.36
PDCD11-204ENST00000478543 FAM135BQ49AJ0 1406 aa17.3■□□□□ 0.36
PDCD11-204ENST00000478543 UNC13BO14795 1591 aa17.29■□□□□ 0.36
PDCD11-204ENST00000478543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.365e-6■■■■□ 19.5
PDCD11-204ENST00000478543 SLIT1O75093 1534 aa17.28■□□□□ 0.36
PDCD11-204ENST00000478543 CFAP65Q6ZU64 1925 aaKnown RBP17.28■□□□□ 0.36
PDCD11-204ENST00000478543 NUP155O75694 1391 aa17.26■□□□□ 0.35
PDCD11-204ENST00000478543 RBM33Q96EV2 1170 aaKnown RBP17.25■□□□□ 0.35
PDCD11-204ENST00000478543 DHX57Q6P158 1386 aaKnown RBP17.24■□□□□ 0.35
PDCD11-204ENST00000478543 TMEM94Q12767 1356 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms