RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 KIF15Q9NS87 1388 aa12.16□□□□□ -0.46
DDX39B-218ENST00000478365 RNF17Q9BXT8 1623 aaKnown RBP12.15□□□□□ -0.46
DDX39B-218ENST00000478365 ADGRL2O95490 1459 aa12.15□□□□□ -0.46
DDX39B-218ENST00000478365 NPATQ14207 1427 aa12.15□□□□□ -0.46
DDX39B-218ENST00000478365 POTEDQ86YR6 584 aa12.15□□□□□ -0.46
DDX39B-218ENST00000478365 KDM5DQ9BY66 1539 aa12.15□□□□□ -0.46
DDX39B-218ENST00000478365 KIF3BO15066 747 aa12.14□□□□□ -0.47
DDX39B-218ENST00000478365 FAM50AQ14320 339 aaKnown RBP12.14□□□□□ -0.47
DDX39B-218ENST00000478365 GGT6Q6P531 493 aa12.14□□□□□ -0.47
DDX39B-218ENST00000478365 C3P01024 1663 aa12.13□□□□□ -0.47
DDX39B-218ENST00000478365 ZC3H13Q5T200 1668 aaKnown RBP12.13□□□□□ -0.47
DDX39B-218ENST00000478365 PREX1Q8TCU6 1659 aa12.13□□□□□ -0.47
DDX39B-218ENST00000478365 MYT1Q01538 1121 aa12.12□□□□□ -0.47
DDX39B-218ENST00000478365 NCOA1Q15788 1441 aa12.11□□□□□ -0.47
DDX39B-218ENST00000478365 UHRF1BP1Q6BDS2 1440 aa12.11□□□□□ -0.47
DDX39B-218ENST00000478365 CLTCQ00610 1675 aaKnown RBP12.11□□□□□ -0.47
DDX39B-218ENST00000478365 ROCK1Q13464 1354 aa12.11□□□□□ -0.47
DDX39B-218ENST00000478365 ZMYM3Q14202 1370 aa12.11□□□□□ -0.47
DDX39B-218ENST00000478365 RRBP1Q9P2E9 1410 aaKnown RBP12.11□□□□□ -0.47
DDX39B-218ENST00000478365 LMTK3Q96Q04 1460 aa12.1□□□□□ -0.47
DDX39B-218ENST00000478365 KANK1Q14678 1352 aa12.1□□□□□ -0.47
DDX39B-218ENST00000478365 WASHC2CQ9Y4E1 1318 aa12.1□□□□□ -0.47
DDX39B-218ENST00000478365 PRDM15P57071 1507 aaPredicted RBP12.09□□□□□ -0.47
DDX39B-218ENST00000478365 RRP7BPQ9NSQ0 103 aa12.08□□□□□ -0.48
DDX39B-218ENST00000478365 PZPP20742 1482 aa12.08□□□□□ -0.48
DDX39B-218ENST00000478365 DEPDC5O75140 1603 aa12.08□□□□□ -0.48
DDX39B-218ENST00000478365 ANKRD50Q9ULJ7 1429 aa12.07□□□□□ -0.48
DDX39B-218ENST00000478365 PTPRKQ15262 1439 aa12.06□□□□□ -0.48
DDX39B-218ENST00000478365 CEBPAP49715 358 aaPredicted RBP12.06□□□□□ -0.48
DDX39B-218ENST00000478365 CHIC2Q9UKJ5 165 aa12.06□□□□□ -0.48
DDX39B-218ENST00000478365 ABCC3O15438 1527 aa12.06□□□□□ -0.48
DDX39B-218ENST00000478365 MROH1Q8NDA8 1641 aa12.05□□□□□ -0.48
DDX39B-218ENST00000478365 ARHGAP31Q2M1Z3 1444 aa12.04□□□□□ -0.48
DDX39B-218ENST00000478365 ZNF142P52746 1687 aaPredicted RBP12.04□□□□□ -0.48
DDX39B-218ENST00000478365 LMTK2Q8IWU2 1503 aa12.04□□□□□ -0.48
DDX39B-218ENST00000478365 TNRQ92752 1358 aa12.03□□□□□ -0.48
DDX39B-218ENST00000478365 NLRP1Q9C000 1473 aa12.02□□□□□ -0.48
DDX39B-218ENST00000478365 CAMSAP1Q5T5Y3 1602 aa12.02□□□□□ -0.49
DDX39B-218ENST00000478365 MYO3AQ8NEV4 1616 aa12.02□□□□□ -0.49
DDX39B-218ENST00000478365 PPARGC1BQ86YN6 1023 aaKnown RBP12.02□□□□□ -0.49
DDX39B-218ENST00000478365 VWDEQ8N2E2 1590 aa12.01□□□□□ -0.49
DDX39B-218ENST00000478365 CEP152O94986 1710 aa12.01□□□□□ -0.49
DDX39B-218ENST00000478365 DMRT2Q9Y5R5 561 aa12.01□□□□□ -0.49
DDX39B-218ENST00000478365 A2ML1A8K2U0 1454 aa12.01□□□□□ -0.49
DDX39B-218ENST00000478365 ACIN1Q9UKV3 1341 aaKnown RBP12□□□□□ -0.49
DDX39B-218ENST00000478365 PLA2R1Q13018 1463 aa12□□□□□ -0.49
DDX39B-218ENST00000478365 RPRD2Q5VT52 1461 aaKnown RBP12□□□□□ -0.49
DDX39B-218ENST00000478365 UNC13BO14795 1591 aa12□□□□□ -0.49
DDX39B-218ENST00000478365 SPATA31D1Q6ZQQ2 1576 aa12□□□□□ -0.49
DDX39B-218ENST00000478365 CEP170BQ9Y4F5 1589 aaPredicted RBP12□□□□□ -0.49
DDX39B-218ENST00000478365 ERVK-7P63135 1459 aa11.99□□□□□ -0.49
DDX39B-218ENST00000478365 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.98□□□□□ -0.495e-16■□□□□ 11.1
DDX39B-218ENST00000478365 TET3O43151 1660 aa11.97□□□□□ -0.49
DDX39B-218ENST00000478365 EFCAB6Q5THR3 1501 aa11.97□□□□□ -0.49
DDX39B-218ENST00000478365 ITGAEP38570 1179 aa11.97□□□□□ -0.49
DDX39B-218ENST00000478365 GCC2Q8IWJ2 1684 aa11.97□□□□□ -0.49
DDX39B-218ENST00000478365 HSPA2P54652 639 aa11.96□□□□□ -0.49
DDX39B-218ENST00000478365 HFM1A2PYH4 1435 aa11.95□□□□□ -0.5
DDX39B-218ENST00000478365 PKD2Q13563 968 aa11.95□□□□□ -0.5
DDX39B-218ENST00000478365 IQGAP3Q86VI3 1631 aa11.95□□□□□ -0.5
DDX39B-218ENST00000478365 PTPRTO14522 1441 aa11.94□□□□□ -0.5
DDX39B-218ENST00000478365 FBXO31Q5XUX0 539 aaPredicted RBP11.94□□□□□ -0.5
DDX39B-218ENST00000478365 THEMISQ8N1K5 641 aaPredicted RBP11.94□□□□□ -0.5
DDX39B-218ENST00000478365 UGGT1Q9NYU2 1555 aa11.93□□□□□ -0.5
DDX39B-218ENST00000478365 CFAP65Q6ZU64 1925 aaKnown RBP11.93□□□□□ -0.5
DDX39B-218ENST00000478365 KDM5AP29375 1690 aaKnown RBP11.93□□□□□ -0.5
DDX39B-218ENST00000478365 NAIPQ13075 1403 aa11.93□□□□□ -0.5
DDX39B-218ENST00000478365 NOS1P29475 1434 aa11.92□□□□□ -0.5
DDX39B-218ENST00000478365 STRCQ7RTU9 1775 aa11.92□□□□□ -0.5
DDX39B-218ENST00000478365 NUP155O75694 1391 aa11.92□□□□□ -0.5
DDX39B-218ENST00000478365 SLC52A1Q9NWF4 448 aa11.91□□□□□ -0.5
DDX39B-218ENST00000478365 POLR1AO95602 1720 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-218ENST00000478365 ANKLE2Q86XL3 938 aa11.89□□□□□ -0.51
DDX39B-218ENST00000478365 UBR1Q8IWV7 1749 aa11.87□□□□□ -0.51
DDX39B-218ENST00000478365 STAG3Q9UJ98 1225 aa11.87□□□□□ -0.51
DDX39B-218ENST00000478365 E9PCH4 1651 aa11.87□□□□□ -0.51
DDX39B-218ENST00000478365 SLIT1O75093 1534 aa11.86□□□□□ -0.51
DDX39B-218ENST00000478365 MED14O60244 1454 aa11.86□□□□□ -0.51
DDX39B-218ENST00000478365 SYNMO15061 1565 aa11.86□□□□□ -0.51
DDX39B-218ENST00000478365 ADGRB3O60242 1522 aa11.86□□□□□ -0.51
DDX39B-218ENST00000478365 HDGFP51858 240 aaKnown RBP11.85□□□□□ -0.51
DDX39B-218ENST00000478365 EID1Q9Y6B2 187 aa11.85□□□□□ -0.51
DDX39B-218ENST00000478365 PIK3C2BO00750 1634 aa11.85□□□□□ -0.51
DDX39B-218ENST00000478365 ARHGAP23Q9P227 1491 aa11.84□□□□□ -0.51
DDX39B-218ENST00000478365 SCAF11Q99590 1463 aaKnown RBP11.83□□□□□ -0.52
DDX39B-218ENST00000478365 TRIM52Q96A61 297 aa11.83□□□□□ -0.52
DDX39B-218ENST00000478365 SETD5Q9C0A6 1442 aa11.83□□□□□ -0.52
DDX39B-218ENST00000478365 NCKAP5LQ9HCH0 1330 aa11.83□□□□□ -0.52
DDX39B-218ENST00000478365 SPHKAPQ2M3C7 1700 aa11.83□□□□□ -0.52
DDX39B-218ENST00000478365 TMEM2Q9UHN6 1383 aa11.82□□□□□ -0.52
DDX39B-218ENST00000478365 IDI1Q13907 227 aa11.82□□□□□ -0.52
DDX39B-218ENST00000478365 NPHP4O75161 1426 aaPredicted RBP11.82□□□□□ -0.52
DDX39B-218ENST00000478365 NEURL4Q96JN8 1562 aa11.82□□□□□ -0.52
DDX39B-218ENST00000478365 IQSEC2Q5JU85 1478 aa11.82□□□□□ -0.52
DDX39B-218ENST00000478365 IQGAP1P46940 1657 aa11.81□□□□□ -0.52
DDX39B-218ENST00000478365 TRPM2O94759 1503 aa11.81□□□□□ -0.52
DDX39B-218ENST00000478365 HRCP23327 699 aa11.8□□□□□ -0.52
DDX39B-218ENST00000478365 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.8□□□□□ -0.52
DDX39B-218ENST00000478365 SLC4A1APQ9BWU0 796 aaKnown RBP11.8□□□□□ -0.52
DDX39B-218ENST00000478365 TMEM131LA2VDJ0 1609 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms