RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PLA2R1Q13018 1463 aa22.7■■□□□ 1.22
SMARCE1-209ENST00000478349 CAMSAP1Q5T5Y3 1602 aa22.69■■□□□ 1.22
SMARCE1-209ENST00000478349 MYO3AQ8NEV4 1616 aa22.69■■□□□ 1.22
SMARCE1-209ENST00000478349 PKD2Q13563 968 aa22.68■■□□□ 1.22
SMARCE1-209ENST00000478349 ZNF142P52746 1687 aaPredicted RBP22.68■■□□□ 1.22
SMARCE1-209ENST00000478349 CEP170BQ9Y4F5 1589 aaPredicted RBP22.67■■□□□ 1.22
SMARCE1-209ENST00000478349 WASHC2CQ9Y4E1 1318 aa22.67■■□□□ 1.22
SMARCE1-209ENST00000478349 MAST1Q9Y2H9 1570 aa22.65■■□□□ 1.22
SMARCE1-209ENST00000478349 KANK4Q5T7N3 995 aaPredicted RBP22.65■■□□□ 1.22
SMARCE1-209ENST00000478349 PZPP20742 1482 aa22.65■■□□□ 1.22
SMARCE1-209ENST00000478349 A2ML1A8K2U0 1454 aa22.64■■□□□ 1.21
SMARCE1-209ENST00000478349 TNRQ92752 1358 aa22.63■■□□□ 1.21
SMARCE1-209ENST00000478349 IQSEC2Q5JU85 1478 aa22.6■■□□□ 1.21
SMARCE1-209ENST00000478349 TCOF1Q13428 1488 aaKnown RBP22.6■■□□□ 1.21
SMARCE1-209ENST00000478349 NCKAP5LQ9HCH0 1330 aa22.57■■□□□ 1.2
SMARCE1-209ENST00000478349 EIF2AK4Q9P2K8 1649 aaKnown RBP22.57■■□□□ 1.2
SMARCE1-209ENST00000478349 SHANK2Q9UPX8 1470 aa22.57■■□□□ 1.2
SMARCE1-209ENST00000478349 NLRP1Q9C000 1473 aa22.56■■□□□ 1.2
SMARCE1-209ENST00000478349 RNF17Q9BXT8 1623 aaKnown RBP22.56■■□□□ 1.2
SMARCE1-209ENST00000478349 DUOX2Q9NRD8 1548 aa22.55■■□□□ 1.2
SMARCE1-209ENST00000478349 ZC3H13Q5T200 1668 aaKnown RBP22.55■■□□□ 1.2
SMARCE1-209ENST00000478349 LTBP4Q8N2S1 1624 aa22.53■■□□□ 1.2
SMARCE1-209ENST00000478349 FBXO31Q5XUX0 539 aaPredicted RBP22.53■■□□□ 1.2
SMARCE1-209ENST00000478349 DNMT1P26358 1616 aaKnown RBP22.53■■□□□ 1.2
SMARCE1-209ENST00000478349 KIF15Q9NS87 1388 aa22.51■■□□□ 1.19
SMARCE1-209ENST00000478349 THEMISQ8N1K5 641 aaPredicted RBP22.51■■□□□ 1.19
SMARCE1-209ENST00000478349 ABCC3O15438 1527 aa22.51■■□□□ 1.19
SMARCE1-209ENST00000478349 FGD6Q6ZV73 1430 aa22.5■■□□□ 1.19
SMARCE1-209ENST00000478349 ERBINQ96RT1 1412 aa22.5■■□□□ 1.19
SMARCE1-209ENST00000478349 PTPN23Q9H3S7 1636 aa22.49■■□□□ 1.19
SMARCE1-209ENST00000478349 ZNF335Q9H4Z2 1342 aaPredicted RBP22.48■■□□□ 1.19
SMARCE1-209ENST00000478349 UGGT1Q9NYU2 1555 aa22.47■■□□□ 1.19
SMARCE1-209ENST00000478349 ANKLE2Q86XL3 938 aa22.47■■□□□ 1.19
SMARCE1-209ENST00000478349 ABCC5O15440 1437 aa22.47■■□□□ 1.19
SMARCE1-209ENST00000478349 DAPK1P53355 1430 aa22.46■■□□□ 1.19
SMARCE1-209ENST00000478349 KANK1Q14678 1352 aa22.45■■□□□ 1.18
SMARCE1-209ENST00000478349 ANKRD30AQ9BXX3 1397 aa22.45■■□□□ 1.18
SMARCE1-209ENST00000478349 CROCC2H7BZ55 1655 aa22.44■■□□□ 1.18
SMARCE1-209ENST00000478349 SPATA31D1Q6ZQQ2 1576 aa22.44■■□□□ 1.18
SMARCE1-209ENST00000478349 ERVK-7P63135 1459 aa22.43■■□□□ 1.18
SMARCE1-209ENST00000478349 PRDM15P57071 1507 aaPredicted RBP22.42■■□□□ 1.18
SMARCE1-209ENST00000478349 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.42■■□□□ 1.18
SMARCE1-209ENST00000478349 RRP7BPQ9NSQ0 103 aa22.42■■□□□ 1.18
SMARCE1-209ENST00000478349 MROH1Q8NDA8 1641 aa22.41■■□□□ 1.18
SMARCE1-209ENST00000478349 POLR1AO95602 1720 aaPredicted RBP22.4■■□□□ 1.18
SMARCE1-209ENST00000478349 ARHGAP31Q2M1Z3 1444 aa22.4■■□□□ 1.18
SMARCE1-209ENST00000478349 CPS1P31327 1500 aa22.39■■□□□ 1.17
SMARCE1-209ENST00000478349 NEURL4Q96JN8 1562 aa22.38■■□□□ 1.17
SMARCE1-209ENST00000478349 UBAP1LF5GYI3 381 aa22.37■■□□□ 1.17
SMARCE1-209ENST00000478349 DEPDC5O75140 1603 aa22.37■■□□□ 1.17
SMARCE1-209ENST00000478349 NPHP4O75161 1426 aaPredicted RBP22.37■■□□□ 1.17
SMARCE1-209ENST00000478349 MED14O60244 1454 aa22.36■■□□□ 1.17
SMARCE1-209ENST00000478349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.34■■□□□ 1.175e-9■■□□□ 14.3
SMARCE1-209ENST00000478349 CHIC2Q9UKJ5 165 aa22.33■■□□□ 1.17
SMARCE1-209ENST00000478349 CEP152O94986 1710 aa22.33■■□□□ 1.17
SMARCE1-209ENST00000478349 FAM50AQ14320 339 aaKnown RBP22.32■■□□□ 1.16
SMARCE1-209ENST00000478349 ADGRL2O95490 1459 aa22.31■■□□□ 1.16
SMARCE1-209ENST00000478349 LMTK2Q8IWU2 1503 aa22.3■■□□□ 1.16
SMARCE1-209ENST00000478349 DISP3Q9P2K9 1392 aa22.28■■□□□ 1.16
SMARCE1-209ENST00000478349 IQGAP1P46940 1657 aa22.28■■□□□ 1.16
SMARCE1-209ENST00000478349 TOM1O60784 492 aa22.28■■□□□ 1.16
SMARCE1-209ENST00000478349 EID1Q9Y6B2 187 aa22.28■■□□□ 1.16
SMARCE1-209ENST00000478349 SCAF11Q99590 1463 aaKnown RBP22.28■■□□□ 1.16
SMARCE1-209ENST00000478349 STAG3Q9UJ98 1225 aa22.27■■□□□ 1.16
SMARCE1-209ENST00000478349 FOXD1Q16676 465 aa22.26■■□□□ 1.15
SMARCE1-209ENST00000478349 VWDEQ8N2E2 1590 aa22.25■■□□□ 1.15
SMARCE1-209ENST00000478349 ANKRD50Q9ULJ7 1429 aa22.24■■□□□ 1.15
SMARCE1-209ENST00000478349 SLIT1O75093 1534 aa22.24■■□□□ 1.15
SMARCE1-209ENST00000478349 UBR1Q8IWV7 1749 aa22.23■■□□□ 1.15
SMARCE1-209ENST00000478349 ARHGAP23Q9P227 1491 aa22.22■■□□□ 1.15
SMARCE1-209ENST00000478349 SCAF1Q9H7N4 1312 aaKnown RBP22.22■■□□□ 1.15
SMARCE1-209ENST00000478349 EFCAB6Q5THR3 1501 aa22.21■■□□□ 1.15
SMARCE1-209ENST00000478349 TXNDC2Q86VQ3 553 aa22.21■■□□□ 1.15
SMARCE1-209ENST00000478349 RPRD2Q5VT52 1461 aaKnown RBP22.2■■□□□ 1.14
SMARCE1-209ENST00000478349 TMEM2Q9UHN6 1383 aa22.19■■□□□ 1.14
SMARCE1-209ENST00000478349 SYNMO15061 1565 aa22.19■■□□□ 1.14
SMARCE1-209ENST00000478349 SLC52A1Q9NWF4 448 aa22.18■■□□□ 1.14
SMARCE1-209ENST00000478349 KDM5AP29375 1690 aaKnown RBP22.17■■□□□ 1.14
SMARCE1-209ENST00000478349 ROCK1Q13464 1354 aa22.16■■□□□ 1.14
SMARCE1-209ENST00000478349 PIP4K2BP78356 416 aa22.16■■□□□ 1.14
SMARCE1-209ENST00000478349 PIK3C2BO00750 1634 aa22.16■■□□□ 1.14
SMARCE1-209ENST00000478349 NOS1P29475 1434 aa22.15■■□□□ 1.14
SMARCE1-209ENST00000478349 LTKP29376 864 aa22.14■■□□□ 1.13
SMARCE1-209ENST00000478349 IDI1Q13907 227 aa22.13■■□□□ 1.13
SMARCE1-209ENST00000478349 LRRC7Q96NW7 1537 aa22.12■■□□□ 1.13
SMARCE1-209ENST00000478349 ADGRB3O60242 1522 aa22.11■■□□□ 1.13
SMARCE1-209ENST00000478349 CFAP65Q6ZU64 1925 aaKnown RBP22.1■■□□□ 1.13
SMARCE1-209ENST00000478349 HDGFP51858 240 aaKnown RBP22.09■■□□□ 1.13
SMARCE1-209ENST00000478349 TET3O43151 1660 aa22.08■■□□□ 1.13
SMARCE1-209ENST00000478349 UNC13BO14795 1591 aa22.08■■□□□ 1.12
SMARCE1-209ENST00000478349 HSPA1LP34931 641 aa22.06■■□□□ 1.12
SMARCE1-209ENST00000478349 BCANQ96GW7 911 aa22.04■■□□□ 1.12
SMARCE1-209ENST00000478349 PPP1R15AO75807 674 aaPredicted RBP22.03■■□□□ 1.12
SMARCE1-209ENST00000478349 GCC2Q8IWJ2 1684 aa22.02■■□□□ 1.12
SMARCE1-209ENST00000478349 KCNA6P17658 529 aa22.01■■□□□ 1.11
SMARCE1-209ENST00000478349 ITGAEP38570 1179 aa22.01■■□□□ 1.11
SMARCE1-209ENST00000478349 ABCF1Q8NE71 845 aaKnown RBP eCLIP22■■□□□ 1.11
SMARCE1-209ENST00000478349 NUP155O75694 1391 aa21.99■■□□□ 1.11
SMARCE1-209ENST00000478349 STRCP1A6NGW2 1772 aa21.99■■□□□ 1.11
SMARCE1-209ENST00000478349 IQGAP3Q86VI3 1631 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms