RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 ROCK1Q13464 1354 aa20.14■□□□□ 0.81
U2AF1-210ENST00000478282 ABCC5O15440 1437 aa20.14■□□□□ 0.81
U2AF1-210ENST00000478282 ARHGEF12Q9NZN5 1544 aa20.13■□□□□ 0.81
U2AF1-210ENST00000478282 DAPK1P53355 1430 aa20.13■□□□□ 0.81
U2AF1-210ENST00000478282 CD109Q6YHK3 1445 aa20.13■□□□□ 0.81
U2AF1-210ENST00000478282 ZNF644Q9H582 1327 aaPredicted RBP20.13■□□□□ 0.81
U2AF1-210ENST00000478282 SHANK2Q9UPX8 1470 aa20.13■□□□□ 0.81
U2AF1-210ENST00000478282 MAST1Q9Y2H9 1570 aa20.13■□□□□ 0.81
U2AF1-210ENST00000478282 DHX29Q7Z478 1369 aaKnown RBP20.12■□□□□ 0.81
U2AF1-210ENST00000478282 FANCAO15360 1455 aa20.12■□□□□ 0.81
U2AF1-210ENST00000478282 ADGBQ8N7X0 1667 aa20.11■□□□□ 0.81
U2AF1-210ENST00000478282 NEO1Q92859 1461 aa20.11■□□□□ 0.81
U2AF1-210ENST00000478282 SYCP2Q9BX26 1530 aa20.1■□□□□ 0.81
U2AF1-210ENST00000478282 NBR1Q14596 966 aa20.1■□□□□ 0.81
U2AF1-210ENST00000478282 CCDC136Q96JN2 1154 aa20.1■□□□□ 0.81
U2AF1-210ENST00000478282 ADGRL2O95490 1459 aa20.09■□□□□ 0.81
U2AF1-210ENST00000478282 ANP32AP39687 249 aaKnown RBP20.08■□□□□ 0.81
U2AF1-210ENST00000478282 EFCAB2Q5VUJ9 269 aa20.07■□□□□ 0.8
U2AF1-210ENST00000478282 IPO9Q96P70 1041 aaKnown RBP20.07■□□□□ 0.8
U2AF1-210ENST00000478282 BCORL1Q5H9F3 1711 aa20.06■□□□□ 0.8
U2AF1-210ENST00000478282 CCDC141Q6ZP82 1450 aa20.06■□□□□ 0.8
U2AF1-210ENST00000478282 SLC4A1APQ9BWU0 796 aaKnown RBP20.05■□□□□ 0.8
U2AF1-210ENST00000478282 RSPH4AQ5TD94 716 aa20.04■□□□□ 0.8
U2AF1-210ENST00000478282 KDM5CP41229 1560 aa20.03■□□□□ 0.8
U2AF1-210ENST00000478282 PLXNC1O60486 1568 aa20.02■□□□□ 0.8
U2AF1-210ENST00000478282 USP47Q96K76 1375 aa20.01■□□□□ 0.79
U2AF1-210ENST00000478282 RICTORQ6R327 1708 aa20.01■□□□□ 0.79
U2AF1-210ENST00000478282 ADGRL1O94910 1474 aa20.01■□□□□ 0.79
U2AF1-210ENST00000478282 INO80Q9ULG1 1556 aaPredicted RBP20.01■□□□□ 0.79
U2AF1-210ENST00000478282 FAM69CQ0P6D2 419 aa20.01■□□□□ 0.79
U2AF1-210ENST00000478282 PZPP20742 1482 aa20■□□□□ 0.79
U2AF1-210ENST00000478282 ZBTB47Q9UFB7 747 aaPredicted RBP20■□□□□ 0.79
U2AF1-210ENST00000478282 TRAPPC8Q9Y2L5 1435 aa20■□□□□ 0.79
U2AF1-210ENST00000478282 ARID4BQ4LE39 1312 aaPredicted RBP20■□□□□ 0.79
U2AF1-210ENST00000478282 PNISRQ8TF01 805 aaKnown RBP19.98■□□□□ 0.79
U2AF1-210ENST00000478282 FRMPD1Q5SYB0 1578 aa19.98■□□□□ 0.79
U2AF1-210ENST00000478282 RTEL1-TNFRSF6BF6WH68 1400 aa19.98■□□□□ 0.79
U2AF1-210ENST00000478282 C9orf84Q5VXU9 1444 aa19.98■□□□□ 0.79
U2AF1-210ENST00000478282 ZNF777Q9ULD5 760 aaPredicted RBP19.97■□□□□ 0.79
U2AF1-210ENST00000478282 TSPOAP1O95153 1857 aa19.97■□□□□ 0.79
U2AF1-210ENST00000478282 ZFYVE16Q7Z3T8 1539 aa19.97■□□□□ 0.79
U2AF1-210ENST00000478282 HNRNPMP52272 730 aaKnown RBP eCLIP19.97■□□□□ 0.79
U2AF1-210ENST00000478282 CNGB1Q14028 1251 aaPredicted RBP19.97■□□□□ 0.79
U2AF1-210ENST00000478282 RTL5Q5HYW3 569 aaPredicted RBP19.97■□□□□ 0.79
U2AF1-210ENST00000478282 POGZQ7Z3K3 1410 aa19.96■□□□□ 0.79
U2AF1-210ENST00000478282 SCAPERQ9BY12 1400 aa19.95■□□□□ 0.78
U2AF1-210ENST00000478282 POLR3GLQ9BT43 218 aa19.95■□□□□ 0.78
U2AF1-210ENST00000478282 ZNF518AQ6AHZ1 1483 aa19.94■□□□□ 0.78
U2AF1-210ENST00000478282 ROCK2O75116 1388 aaKnown RBP19.94■□□□□ 0.78
U2AF1-210ENST00000478282 KIDINS220Q9ULH0 1771 aa19.93■□□□□ 0.78
U2AF1-210ENST00000478282 ZMYM4Q5VZL5 1548 aa19.93■□□□□ 0.78
U2AF1-210ENST00000478282 TMC1Q8TDI8 760 aa19.92■□□□□ 0.78
U2AF1-210ENST00000478282 LRPPRCP42704 1394 aaKnown RBP19.92■□□□□ 0.78
U2AF1-210ENST00000478282 MLH3Q9UHC1 1453 aa19.91■□□□□ 0.78
U2AF1-210ENST00000478282 ATP7AQ04656 1500 aa19.9■□□□□ 0.78
U2AF1-210ENST00000478282 KIF15Q9NS87 1388 aa19.89■□□□□ 0.77
U2AF1-210ENST00000478282 HECW2Q9P2P5 1572 aa19.89■□□□□ 0.77
U2AF1-210ENST00000478282 ANKRD30AQ9BXX3 1397 aa19.89■□□□□ 0.77
U2AF1-210ENST00000478282 ZNF326Q5BKZ1 582 aaKnown RBP19.89■□□□□ 0.77
U2AF1-210ENST00000478282 SENP3-EIF4A1A0A087X0R7 540 aa19.88■□□□□ 0.77
U2AF1-210ENST00000478282 RALGAPBQ86X10 1494 aa19.88■□□□□ 0.77
U2AF1-210ENST00000478282 UHRF1BP1Q6BDS2 1440 aa19.88■□□□□ 0.77
U2AF1-210ENST00000478282 RRP1P56182 461 aaKnown RBP19.87■□□□□ 0.77
U2AF1-210ENST00000478282 BRD4O60885 1362 aaPredicted RBP19.87■□□□□ 0.77
U2AF1-210ENST00000478282 TCERG1O14776 1098 aaKnown RBP19.86■□□□□ 0.77
U2AF1-210ENST00000478282 KTN1Q86UP2 1357 aaKnown RBP19.86■□□□□ 0.77
U2AF1-210ENST00000478282 DUOX2Q9NRD8 1548 aa19.85■□□□□ 0.77
U2AF1-210ENST00000478282 TSPY4P0CV99 314 aa19.85■□□□□ 0.77
U2AF1-210ENST00000478282 TSPY10P0CW01 314 aa19.85■□□□□ 0.77
U2AF1-210ENST00000478282 AFAP1Q8N556 730 aa19.84■□□□□ 0.77
U2AF1-210ENST00000478282 COL17A1Q9UMD9 1497 aaPredicted RBP19.84■□□□□ 0.77
U2AF1-210ENST00000478282 MYBBP1AQ9BQG0 1328 aaKnown RBP19.84■□□□□ 0.77
U2AF1-210ENST00000478282 E9PCH4 1651 aa19.83■□□□□ 0.77
U2AF1-210ENST00000478282 ABCA6Q8N139 1617 aa19.83■□□□□ 0.77
U2AF1-210ENST00000478282 PKD2Q13563 968 aa19.82■□□□□ 0.76
U2AF1-210ENST00000478282 EXOC6Q8TAG9 804 aa19.82■□□□□ 0.76
U2AF1-210ENST00000478282 EIF2AK4Q9P2K8 1649 aaKnown RBP19.82■□□□□ 0.76
U2AF1-210ENST00000478282 MAGI2Q86UL8 1455 aa19.82■□□□□ 0.76
U2AF1-210ENST00000478282 ERBINQ96RT1 1412 aa19.81■□□□□ 0.76
U2AF1-210ENST00000478282 RALBP1Q15311 655 aa19.81■□□□□ 0.76
U2AF1-210ENST00000478282 UNC13BO14795 1591 aa19.81■□□□□ 0.76
U2AF1-210ENST00000478282 KDM5DQ9BY66 1539 aa19.81■□□□□ 0.76
U2AF1-210ENST00000478282 DEPDC5O75140 1603 aa19.8■□□□□ 0.76
U2AF1-210ENST00000478282 DIP2CQ9Y2E4 1556 aa19.8■□□□□ 0.76
U2AF1-210ENST00000478282 SPAG9O60271 1321 aaKnown RBP19.8■□□□□ 0.76
U2AF1-210ENST00000478282 REREQ9P2R6 1566 aa19.8■□□□□ 0.76
U2AF1-210ENST00000478282 RCAN3Q9UKA8 241 aa19.8■□□□□ 0.76
U2AF1-210ENST00000478282 NPM2Q86SE8 214 aaKnown RBP19.79■□□□□ 0.76
U2AF1-210ENST00000478282 CARD11Q9BXL7 1154 aa19.79■□□□□ 0.76
U2AF1-210ENST00000478282 PDE4AP27815 886 aa19.79■□□□□ 0.76
U2AF1-210ENST00000478282 ANKRD50Q9ULJ7 1429 aa19.79■□□□□ 0.76
U2AF1-210ENST00000478282 MS4A1P11836 297 aa19.78■□□□□ 0.76
U2AF1-210ENST00000478282 BACH2Q9BYV9 841 aa19.77■□□□□ 0.75
U2AF1-210ENST00000478282 USP35Q9P2H5 1018 aa19.76■□□□□ 0.75
U2AF1-210ENST00000478282 PDE3BQ13370 1112 aa19.75■□□□□ 0.75
U2AF1-210ENST00000478282 RNF17Q9BXT8 1623 aaKnown RBP19.74■□□□□ 0.75
U2AF1-210ENST00000478282 ST20-MTHFSA0A0A6YYL1 179 aa19.74■□□□□ 0.75
U2AF1-210ENST00000478282 RAPGEF3O95398 923 aa19.73■□□□□ 0.75
U2AF1-210ENST00000478282 MROH1Q8NDA8 1641 aa19.72■□□□□ 0.75
U2AF1-210ENST00000478282 VWDEQ8N2E2 1590 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms