RNA–Protein interactions for RNA: ENST00000478251.1

GFM1-206, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-206ENST00000478251 FAM135AQ9P2D6 1515 aa16.69■□□□□ 0.26
GFM1-206ENST00000478251 NUP155O75694 1391 aa16.69■□□□□ 0.26
GFM1-206ENST00000478251 SIGLEC1Q9BZZ2 1709 aa16.69■□□□□ 0.26
GFM1-206ENST00000478251 IQGAP3Q86VI3 1631 aa16.69■□□□□ 0.26
GFM1-206ENST00000478251 A2MP01023 1474 aa16.69■□□□□ 0.26
GFM1-206ENST00000478251 DHX29Q7Z478 1369 aaKnown RBP16.69■□□□□ 0.26
GFM1-206ENST00000478251 ZEB1P37275 1124 aaPredicted RBP16.69■□□□□ 0.26
GFM1-206ENST00000478251 SIN3AQ96ST3 1273 aa16.69■□□□□ 0.26
GFM1-206ENST00000478251 MYT1LQ9UL68 1186 aa16.69■□□□□ 0.26
GFM1-206ENST00000478251 BCORL1Q5H9F3 1711 aa16.66■□□□□ 0.26
GFM1-206ENST00000478251 TRHP20396 242 aaPredicted RBP16.66■□□□□ 0.26
GFM1-206ENST00000478251 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
GFM1-206ENST00000478251 RNF17Q9BXT8 1623 aaKnown RBP16.65■□□□□ 0.26
GFM1-206ENST00000478251 VWDEQ8N2E2 1590 aa16.65■□□□□ 0.26
GFM1-206ENST00000478251 PRDM15P57071 1507 aaPredicted RBP16.65■□□□□ 0.26
GFM1-206ENST00000478251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.25
GFM1-206ENST00000478251 ANKRD30BQ9BXX2 1392 aa16.63■□□□□ 0.25
GFM1-206ENST00000478251 KIF3BO15066 747 aa16.62■□□□□ 0.25
GFM1-206ENST00000478251 PKD2Q13563 968 aa16.62■□□□□ 0.25
GFM1-206ENST00000478251 ARHGEF40Q8TER5 1519 aa16.61■□□□□ 0.25
GFM1-206ENST00000478251 ACIN1Q9UKV3 1341 aaKnown RBP16.61■□□□□ 0.25
GFM1-206ENST00000478251 CEP152O94986 1710 aa16.6■□□□□ 0.25
GFM1-206ENST00000478251 E9PCH4 1651 aa16.6■□□□□ 0.25
GFM1-206ENST00000478251 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
GFM1-206ENST00000478251 REREQ9P2R6 1566 aa16.58■□□□□ 0.24
GFM1-206ENST00000478251 TET3O43151 1660 aa16.57■□□□□ 0.24
GFM1-206ENST00000478251 ATP10AO60312 1499 aa16.57■□□□□ 0.24
GFM1-206ENST00000478251 PLA2R1Q13018 1463 aa16.57■□□□□ 0.24
GFM1-206ENST00000478251 RPRD2Q5VT52 1461 aaKnown RBP16.54■□□□□ 0.24
GFM1-206ENST00000478251 EFCAB6Q5THR3 1501 aa16.52■□□□□ 0.24
GFM1-206ENST00000478251 LMTK2Q8IWU2 1503 aa16.52■□□□□ 0.24
GFM1-206ENST00000478251 ABCC3O15438 1527 aa16.52■□□□□ 0.23
GFM1-206ENST00000478251 CFAP65Q6ZU64 1925 aaKnown RBP16.51■□□□□ 0.23
GFM1-206ENST00000478251 AGLP35573 1532 aa16.51■□□□□ 0.23
GFM1-206ENST00000478251 GGT6Q6P531 493 aa16.51■□□□□ 0.23
GFM1-206ENST00000478251 SPHKAPQ2M3C7 1700 aa16.5■□□□□ 0.23
GFM1-206ENST00000478251 CAMSAP1Q5T5Y3 1602 aa16.49■□□□□ 0.23
GFM1-206ENST00000478251 KANK1Q14678 1352 aa16.48■□□□□ 0.23
GFM1-206ENST00000478251 ZC3H13Q5T200 1668 aaKnown RBP16.47■□□□□ 0.23
GFM1-206ENST00000478251 NPATQ14207 1427 aa16.46■□□□□ 0.23
GFM1-206ENST00000478251 PTPRTO14522 1441 aa16.46■□□□□ 0.22
GFM1-206ENST00000478251 TONSLQ96HA7 1378 aa16.45■□□□□ 0.22
GFM1-206ENST00000478251 CLTCL1P53675 1640 aa16.45■□□□□ 0.22
GFM1-206ENST00000478251 TRPM2O94759 1503 aa16.45■□□□□ 0.22
GFM1-206ENST00000478251 UGGT1Q9NYU2 1555 aa16.45■□□□□ 0.22
GFM1-206ENST00000478251 CLTCQ00610 1675 aaKnown RBP16.43■□□□□ 0.22
GFM1-206ENST00000478251 L3MBTL2Q969R5 705 aa16.43■□□□□ 0.22
GFM1-206ENST00000478251 TIMELESSQ9UNS1 1208 aa16.43■□□□□ 0.22
GFM1-206ENST00000478251 PPP1R15AO75807 674 aaPredicted RBP16.42■□□□□ 0.22
GFM1-206ENST00000478251 WASHC2CQ9Y4E1 1318 aa16.42■□□□□ 0.22
GFM1-206ENST00000478251 CCDC144AA2RUR9 1427 aa16.42■□□□□ 0.22
GFM1-206ENST00000478251 SYNMO15061 1565 aa16.39■□□□□ 0.21
GFM1-206ENST00000478251 MLECQ14165 292 aa16.39■□□□□ 0.21
GFM1-206ENST00000478251 ARHGAP31Q2M1Z3 1444 aa16.38■□□□□ 0.21
GFM1-206ENST00000478251 PREX1Q8TCU6 1659 aa16.38■□□□□ 0.21
GFM1-206ENST00000478251 MROH2AA6NES4 1674 aa16.37■□□□□ 0.21
GFM1-206ENST00000478251 SPATA31E1Q6ZUB1 1445 aa16.37■□□□□ 0.21
GFM1-206ENST00000478251 NOS1P29475 1434 aa16.36■□□□□ 0.21
GFM1-206ENST00000478251 PIK3C2BO00750 1634 aa16.35■□□□□ 0.21
GFM1-206ENST00000478251 NBPF8Q3BBV2 869 aa16.34■□□□□ 0.21
GFM1-206ENST00000478251 KIF1BO60333 1816 aa16.33■□□□□ 0.21
GFM1-206ENST00000478251 ARID4BQ4LE39 1312 aaPredicted RBP16.32■□□□□ 0.2
GFM1-206ENST00000478251 CNTLNQ9NXG0 1405 aa16.32■□□□□ 0.2
GFM1-206ENST00000478251 FBXO31Q5XUX0 539 aaPredicted RBP16.31■□□□□ 0.2
GFM1-206ENST00000478251 MYO5BQ9ULV0 1848 aa16.31■□□□□ 0.2
GFM1-206ENST00000478251 RGL3Q3MIN7 710 aa16.3■□□□□ 0.2
GFM1-206ENST00000478251 ERVK-7P63135 1459 aa16.3■□□□□ 0.2
GFM1-206ENST00000478251 FER1L4A9Z1Z3 1794 aa16.3■□□□□ 0.2
GFM1-206ENST00000478251 ADGRB3O60242 1522 aa16.3■□□□□ 0.2
GFM1-206ENST00000478251 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
GFM1-206ENST00000478251 IFT172Q9UG01 1749 aa16.29■□□□□ 0.2
GFM1-206ENST00000478251 SPATA31D1Q6ZQQ2 1576 aa16.28■□□□□ 0.2
GFM1-206ENST00000478251 NEURL4Q96JN8 1562 aa16.28■□□□□ 0.2
GFM1-206ENST00000478251 DCAF11Q8TEB1 546 aa16.28■□□□□ 0.2
GFM1-206ENST00000478251 UHRF1BP1Q6BDS2 1440 aa16.28■□□□□ 0.2
GFM1-206ENST00000478251 ZMYM3Q14202 1370 aa16.26■□□□□ 0.19
GFM1-206ENST00000478251 KDM2AQ9Y2K7 1162 aa16.26■□□□□ 0.19
GFM1-206ENST00000478251 C3P01024 1663 aa16.26■□□□□ 0.19
GFM1-206ENST00000478251 MADDQ8WXG6 1647 aa16.24■□□□□ 0.19
GFM1-206ENST00000478251 PRAG1Q86YV5 1406 aa16.24■□□□□ 0.19
GFM1-206ENST00000478251 PPLO60437 1756 aa16.24■□□□□ 0.19
GFM1-206ENST00000478251 TMEM131LA2VDJ0 1609 aa16.24■□□□□ 0.19
GFM1-206ENST00000478251 TRPM1Q7Z4N2 1603 aa16.24■□□□□ 0.19
GFM1-206ENST00000478251 IDI1Q13907 227 aa16.23■□□□□ 0.19
GFM1-206ENST00000478251 ZNF326Q5BKZ1 582 aaKnown RBP16.23■□□□□ 0.19
GFM1-206ENST00000478251 ADAMTSL3P82987 1691 aa16.22■□□□□ 0.19
GFM1-206ENST00000478251 RIMS1Q86UR5 1692 aaKnown RBP16.21■□□□□ 0.19
GFM1-206ENST00000478251 RALGAPBQ86X10 1494 aa16.21■□□□□ 0.19
GFM1-206ENST00000478251 ZNF316A6NFI3 1004 aaPredicted RBP16.21■□□□□ 0.18
GFM1-206ENST00000478251 HIRIP3Q9BW71 556 aaPredicted RBP16.21■□□□□ 0.18
GFM1-206ENST00000478251 CEBPAP49715 358 aaPredicted RBP16.2■□□□□ 0.18
GFM1-206ENST00000478251 NEXMIFQ5QGS0 1516 aa16.19■□□□□ 0.18
GFM1-206ENST00000478251 ESF1Q9H501 851 aaKnown RBP16.18■□□□□ 0.18
GFM1-206ENST00000478251 MYOM2P54296 1465 aa16.17■□□□□ 0.18
GFM1-206ENST00000478251 CHGAP10645 457 aaKnown RBP16.17■□□□□ 0.18
GFM1-206ENST00000478251 SLC52A1Q9NWF4 448 aa16.17■□□□□ 0.18
GFM1-206ENST00000478251 NRXN1Q9ULB1 1477 aa16.16■□□□□ 0.18
GFM1-206ENST00000478251 ADGRF5Q8IZF2 1346 aa16.16■□□□□ 0.18
GFM1-206ENST00000478251 NBPF1Q3BBV0 1214 aa16.15■□□□□ 0.18
GFM1-206ENST00000478251 TNRQ92752 1358 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms