RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 FBXO31Q5XUX0 539 aaPredicted RBP21.45■■□□□ 1.02
RCC1-211ENST00000478232 PKD2Q13563 968 aa21.43■■□□□ 1.02
RCC1-211ENST00000478232 KDM5DQ9BY66 1539 aa21.43■■□□□ 1.02
RCC1-211ENST00000478232 CAMSAP1Q5T5Y3 1602 aa21.42■■□□□ 1.02
RCC1-211ENST00000478232 NCKAP5LQ9HCH0 1330 aa21.42■■□□□ 1.02
RCC1-211ENST00000478232 ABCC5O15440 1437 aa21.41■■□□□ 1.02
RCC1-211ENST00000478232 PZPP20742 1482 aa21.4■■□□□ 1.02
RCC1-211ENST00000478232 TNRQ92752 1358 aa21.4■■□□□ 1.02
RCC1-211ENST00000478232 FGD6Q6ZV73 1430 aa21.39■■□□□ 1.02
RCC1-211ENST00000478232 RRP7BPQ9NSQ0 103 aa21.39■■□□□ 1.01
RCC1-211ENST00000478232 CEP170BQ9Y4F5 1589 aaPredicted RBP21.39■■□□□ 1.01
RCC1-211ENST00000478232 PLA2R1Q13018 1463 aa21.39■■□□□ 1.01
RCC1-211ENST00000478232 MYO3AQ8NEV4 1616 aa21.38■■□□□ 1.01
RCC1-211ENST00000478232 PTPN23Q9H3S7 1636 aa21.38■■□□□ 1.01
RCC1-211ENST00000478232 A2ML1A8K2U0 1454 aa21.38■■□□□ 1.01
RCC1-211ENST00000478232 DUOX2Q9NRD8 1548 aa21.37■■□□□ 1.01
RCC1-211ENST00000478232 KIF15Q9NS87 1388 aa21.36■■□□□ 1.01
RCC1-211ENST00000478232 TCOF1Q13428 1488 aaKnown RBP21.36■■□□□ 1.01
RCC1-211ENST00000478232 SHANK2Q9UPX8 1470 aa21.36■■□□□ 1.01
RCC1-211ENST00000478232 ZNF142P52746 1687 aaPredicted RBP21.35■■□□□ 1.01
RCC1-211ENST00000478232 THEMISQ8N1K5 641 aaPredicted RBP21.35■■□□□ 1.01
RCC1-211ENST00000478232 DAPK1P53355 1430 aa21.35■■□□□ 1.01
RCC1-211ENST00000478232 RNF17Q9BXT8 1623 aaKnown RBP21.33■■□□□ 1.01
RCC1-211ENST00000478232 EIF2AK4Q9P2K8 1649 aaKnown RBP21.33■■□□□ 1.01
RCC1-211ENST00000478232 CHIC2Q9UKJ5 165 aa21.32■■□□□ 1
RCC1-211ENST00000478232 ANKRD30AQ9BXX3 1397 aa21.32■■□□□ 1
RCC1-211ENST00000478232 ABCC3O15438 1527 aa21.31■■□□□ 1
RCC1-211ENST00000478232 NLRP1Q9C000 1473 aa21.31■■□□□ 1
RCC1-211ENST00000478232 ERBINQ96RT1 1412 aa21.3■■□□□ 1
RCC1-211ENST00000478232 DNMT1P26358 1616 aaKnown RBP21.3■■□□□ 1
RCC1-211ENST00000478232 FAM50AQ14320 339 aaKnown RBP21.3■■□□□ 1
RCC1-211ENST00000478232 ANKLE2Q86XL3 938 aa21.3■■□□□ 1
RCC1-211ENST00000478232 LTBP4Q8N2S1 1624 aa21.29■■□□□ 1
RCC1-211ENST00000478232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.28■■□□□ 1
RCC1-211ENST00000478232 ZC3H13Q5T200 1668 aaKnown RBP21.27■■□□□ 1
RCC1-211ENST00000478232 ZNF335Q9H4Z2 1342 aaPredicted RBP21.26■□□□□ 0.99
RCC1-211ENST00000478232 MROH1Q8NDA8 1641 aa21.26■□□□□ 0.99
RCC1-211ENST00000478232 KANK1Q14678 1352 aa21.25■□□□□ 0.99
RCC1-211ENST00000478232 CROCC2H7BZ55 1655 aa21.25■□□□□ 0.99
RCC1-211ENST00000478232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.24■□□□□ 0.99
RCC1-211ENST00000478232 IQSEC2Q5JU85 1478 aa21.23■□□□□ 0.99
RCC1-211ENST00000478232 SPATA31D1Q6ZQQ2 1576 aa21.23■□□□□ 0.99
RCC1-211ENST00000478232 UGGT1Q9NYU2 1555 aa21.23■□□□□ 0.99
RCC1-211ENST00000478232 ARHGAP31Q2M1Z3 1444 aa21.22■□□□□ 0.99
RCC1-211ENST00000478232 ERVK-7P63135 1459 aa21.22■□□□□ 0.99
RCC1-211ENST00000478232 PRDM15P57071 1507 aaPredicted RBP21.19■□□□□ 0.98
RCC1-211ENST00000478232 ADGRL2O95490 1459 aa21.19■□□□□ 0.98
RCC1-211ENST00000478232 CEP152O94986 1710 aa21.16■□□□□ 0.98
RCC1-211ENST00000478232 MED14O60244 1454 aa21.15■□□□□ 0.98
RCC1-211ENST00000478232 DEPDC5O75140 1603 aa21.15■□□□□ 0.98
RCC1-211ENST00000478232 NPHP4O75161 1426 aaPredicted RBP21.14■□□□□ 0.98
RCC1-211ENST00000478232 NEURL4Q96JN8 1562 aa21.14■□□□□ 0.97
RCC1-211ENST00000478232 ANKRD50Q9ULJ7 1429 aa21.13■□□□□ 0.97
RCC1-211ENST00000478232 UBAP1LF5GYI3 381 aa21.12■□□□□ 0.97
RCC1-211ENST00000478232 LMTK2Q8IWU2 1503 aa21.12■□□□□ 0.97
RCC1-211ENST00000478232 POLR1AO95602 1720 aaPredicted RBP21.12■□□□□ 0.97
RCC1-211ENST00000478232 CFAP65Q6ZU64 1925 aaKnown RBP21.12■□□□□ 0.97
RCC1-211ENST00000478232 TXNDC2Q86VQ3 553 aa21.11■□□□□ 0.97
RCC1-211ENST00000478232 PPARGC1BQ86YN6 1023 aaKnown RBP21.11■□□□□ 0.97
RCC1-211ENST00000478232 STAG3Q9UJ98 1225 aa21.1■□□□□ 0.97
RCC1-211ENST00000478232 VWDEQ8N2E2 1590 aa21.1■□□□□ 0.97
RCC1-211ENST00000478232 IDI1Q13907 227 aa21.09■□□□□ 0.97
RCC1-211ENST00000478232 EID1Q9Y6B2 187 aa21.09■□□□□ 0.97
RCC1-211ENST00000478232 LTKP29376 864 aa21.08■□□□□ 0.97
RCC1-211ENST00000478232 ROCK1Q13464 1354 aa21.08■□□□□ 0.96
RCC1-211ENST00000478232 SLC52A1Q9NWF4 448 aa21.07■□□□□ 0.96
RCC1-211ENST00000478232 CPS1P31327 1500 aa21.07■□□□□ 0.96
RCC1-211ENST00000478232 UBR1Q8IWV7 1749 aa21.05■□□□□ 0.96
RCC1-211ENST00000478232 ITGAEP38570 1179 aa21.04■□□□□ 0.96
RCC1-211ENST00000478232 SCAF11Q99590 1463 aaKnown RBP21.04■□□□□ 0.96
RCC1-211ENST00000478232 ARHGAP23Q9P227 1491 aa21.04■□□□□ 0.96
RCC1-211ENST00000478232 SLIT1O75093 1534 aa21.04■□□□□ 0.96
RCC1-211ENST00000478232 NOS1P29475 1434 aa21.04■□□□□ 0.96
RCC1-211ENST00000478232 TMEM2Q9UHN6 1383 aa21.03■□□□□ 0.96
RCC1-211ENST00000478232 TOM1O60784 492 aa21.03■□□□□ 0.96
RCC1-211ENST00000478232 IQGAP1P46940 1657 aa21.02■□□□□ 0.95
RCC1-211ENST00000478232 RPRD2Q5VT52 1461 aaKnown RBP21.01■□□□□ 0.95
RCC1-211ENST00000478232 EFCAB6Q5THR3 1501 aa21.01■□□□□ 0.95
RCC1-211ENST00000478232 PIK3C2BO00750 1634 aa20.99■□□□□ 0.95
RCC1-211ENST00000478232 SYNMO15061 1565 aa20.96■□□□□ 0.95
RCC1-211ENST00000478232 KDM5AP29375 1690 aaKnown RBP20.96■□□□□ 0.95
RCC1-211ENST00000478232 HDGFP51858 240 aaKnown RBP20.95■□□□□ 0.94
RCC1-211ENST00000478232 NUP155O75694 1391 aa20.95■□□□□ 0.94
RCC1-211ENST00000478232 PIP4K2BP78356 416 aa20.94■□□□□ 0.94
RCC1-211ENST00000478232 SCAF1Q9H7N4 1312 aaKnown RBP20.93■□□□□ 0.94
RCC1-211ENST00000478232 UNC13BO14795 1591 aa20.93■□□□□ 0.94
RCC1-211ENST00000478232 TET3O43151 1660 aa20.93■□□□□ 0.94
RCC1-211ENST00000478232 LRRC7Q96NW7 1537 aa20.91■□□□□ 0.94
RCC1-211ENST00000478232 RRBP1Q9P2E9 1410 aaKnown RBP20.9■□□□□ 0.94
RCC1-211ENST00000478232 DISP3Q9P2K9 1392 aa20.9■□□□□ 0.94
RCC1-211ENST00000478232 BCANQ96GW7 911 aa20.89■□□□□ 0.93
RCC1-211ENST00000478232 SLC26A8Q96RN1 970 aa20.89■□□□□ 0.93
RCC1-211ENST00000478232 ADGRB3O60242 1522 aa20.88■□□□□ 0.93
RCC1-211ENST00000478232 KCNA6P17658 529 aa20.88■□□□□ 0.93
RCC1-211ENST00000478232 CHGAP10645 457 aaKnown RBP20.87■□□□□ 0.93
RCC1-211ENST00000478232 GCC2Q8IWJ2 1684 aa20.86■□□□□ 0.93
RCC1-211ENST00000478232 HSPA1LP34931 641 aa20.86■□□□□ 0.93
RCC1-211ENST00000478232 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.86■□□□□ 0.93
RCC1-211ENST00000478232 STRCP1A6NGW2 1772 aa20.86■□□□□ 0.93
RCC1-211ENST00000478232 IQGAP3Q86VI3 1631 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms