RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 DNMT1P26358 1616 aaKnown RBP23.15■■□□□ 1.3
SNX21-210ENST00000478230 KIF15Q9NS87 1388 aa23.14■■□□□ 1.3
SNX21-210ENST00000478230 HSPA2P54652 639 aa23.14■■□□□ 1.29
SNX21-210ENST00000478230 CLTCQ00610 1675 aaKnown RBP23.12■■□□□ 1.29
SNX21-210ENST00000478230 CHIC2Q9UKJ5 165 aa23.11■■□□□ 1.29
SNX21-210ENST00000478230 DMRT2Q9Y5R5 561 aa23.11■■□□□ 1.29
SNX21-210ENST00000478230 KDM5DQ9BY66 1539 aa23.11■■□□□ 1.29
SNX21-210ENST00000478230 EIF2AK4Q9P2K8 1649 aaKnown RBP23.11■■□□□ 1.29
SNX21-210ENST00000478230 ERBINQ96RT1 1412 aa23.1■■□□□ 1.29
SNX21-210ENST00000478230 CROCC2H7BZ55 1655 aa23.09■■□□□ 1.29
SNX21-210ENST00000478230 PTPRKQ15262 1439 aa23.07■■□□□ 1.28
SNX21-210ENST00000478230 NCOA1Q15788 1441 aa23.06■■□□□ 1.28
SNX21-210ENST00000478230 KANK1Q14678 1352 aa23.05■■□□□ 1.28
SNX21-210ENST00000478230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.05■■□□□ 1.28
SNX21-210ENST00000478230 RNF17Q9BXT8 1623 aaKnown RBP23.04■■□□□ 1.28
SNX21-210ENST00000478230 PPARGC1BQ86YN6 1023 aaKnown RBP23.04■■□□□ 1.28
SNX21-210ENST00000478230 ADGRL2O95490 1459 aa23.03■■□□□ 1.28
SNX21-210ENST00000478230 PZPP20742 1482 aa23.03■■□□□ 1.28
SNX21-210ENST00000478230 TNRQ92752 1358 aa23■■□□□ 1.27
SNX21-210ENST00000478230 ZC3H13Q5T200 1668 aaKnown RBP23■■□□□ 1.27
SNX21-210ENST00000478230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.99■■□□□ 1.273e-6■■□□□ 11.7
SNX21-210ENST00000478230 FBXO31Q5XUX0 539 aaPredicted RBP22.97■■□□□ 1.27
SNX21-210ENST00000478230 ROCK1Q13464 1354 aa22.97■■□□□ 1.27
SNX21-210ENST00000478230 ABCC3O15438 1527 aa22.97■■□□□ 1.27
SNX21-210ENST00000478230 ANKRD50Q9ULJ7 1429 aa22.95■■□□□ 1.26
SNX21-210ENST00000478230 PKD2Q13563 968 aa22.94■■□□□ 1.26
SNX21-210ENST00000478230 A2ML1A8K2U0 1454 aa22.93■■□□□ 1.26
SNX21-210ENST00000478230 PRDM15P57071 1507 aaPredicted RBP22.92■■□□□ 1.26
SNX21-210ENST00000478230 ITGAEP38570 1179 aa22.92■■□□□ 1.26
SNX21-210ENST00000478230 THEMISQ8N1K5 641 aaPredicted RBP22.92■■□□□ 1.26
SNX21-210ENST00000478230 NLRP1Q9C000 1473 aa22.92■■□□□ 1.26
SNX21-210ENST00000478230 PTPRTO14522 1441 aa22.91■■□□□ 1.26
SNX21-210ENST00000478230 ARHGAP31Q2M1Z3 1444 aa22.91■■□□□ 1.26
SNX21-210ENST00000478230 MROH1Q8NDA8 1641 aa22.91■■□□□ 1.26
SNX21-210ENST00000478230 MYO3AQ8NEV4 1616 aa22.91■■□□□ 1.26
SNX21-210ENST00000478230 CEP170BQ9Y4F5 1589 aaPredicted RBP22.91■■□□□ 1.26
SNX21-210ENST00000478230 ZNF142P52746 1687 aaPredicted RBP22.9■■□□□ 1.26
SNX21-210ENST00000478230 PLA2R1Q13018 1463 aa22.89■■□□□ 1.25
SNX21-210ENST00000478230 RRBP1Q9P2E9 1410 aaKnown RBP22.89■■□□□ 1.25
SNX21-210ENST00000478230 CAMSAP1Q5T5Y3 1602 aa22.89■■□□□ 1.25
SNX21-210ENST00000478230 DEPDC5O75140 1603 aa22.88■■□□□ 1.25
SNX21-210ENST00000478230 ERVK-7P63135 1459 aa22.85■■□□□ 1.25
SNX21-210ENST00000478230 SPATA31D1Q6ZQQ2 1576 aa22.84■■□□□ 1.25
SNX21-210ENST00000478230 STRCQ7RTU9 1775 aa22.84■■□□□ 1.25
SNX21-210ENST00000478230 LMTK2Q8IWU2 1503 aa22.84■■□□□ 1.25
SNX21-210ENST00000478230 CEP152O94986 1710 aa22.84■■□□□ 1.25
SNX21-210ENST00000478230 ANKLE2Q86XL3 938 aa22.83■■□□□ 1.25
SNX21-210ENST00000478230 NCKAP5LQ9HCH0 1330 aa22.82■■□□□ 1.24
SNX21-210ENST00000478230 VWDEQ8N2E2 1590 aa22.8■■□□□ 1.24
SNX21-210ENST00000478230 UGGT1Q9NYU2 1555 aa22.8■■□□□ 1.24
SNX21-210ENST00000478230 STAG3Q9UJ98 1225 aa22.78■■□□□ 1.24
SNX21-210ENST00000478230 CERKQ8TCT0 537 aa22.77■■□□□ 1.24
SNX21-210ENST00000478230 FBXO41Q8TF61 875 aa22.77■■□□□ 1.24
SNX21-210ENST00000478230 RPRD2Q5VT52 1461 aaKnown RBP22.77■■□□□ 1.24
SNX21-210ENST00000478230 SLC52A1Q9NWF4 448 aa22.75■■□□□ 1.23
SNX21-210ENST00000478230 ILDR1Q86SU0 546 aaPredicted RBP22.74■■□□□ 1.23
SNX21-210ENST00000478230 CFAP65Q6ZU64 1925 aaKnown RBP22.74■■□□□ 1.23
SNX21-210ENST00000478230 NUP155O75694 1391 aa22.74■■□□□ 1.23
SNX21-210ENST00000478230 EFCAB6Q5THR3 1501 aa22.72■■□□□ 1.23
SNX21-210ENST00000478230 UNC13BO14795 1591 aa22.72■■□□□ 1.23
SNX21-210ENST00000478230 EID1Q9Y6B2 187 aa22.71■■□□□ 1.23
SNX21-210ENST00000478230 NOS1P29475 1434 aa22.69■■□□□ 1.22
SNX21-210ENST00000478230 IDI1Q13907 227 aa22.69■■□□□ 1.22
SNX21-210ENST00000478230 TET3O43151 1660 aa22.68■■□□□ 1.22
SNX21-210ENST00000478230 HDGFP51858 240 aaKnown RBP22.66■■□□□ 1.22
SNX21-210ENST00000478230 ACIN1Q9UKV3 1341 aaKnown RBP22.65■■□□□ 1.22
SNX21-210ENST00000478230 TXNDC2Q86VQ3 553 aa22.65■■□□□ 1.22
SNX21-210ENST00000478230 MED14O60244 1454 aa22.65■■□□□ 1.22
SNX21-210ENST00000478230 NPHP4O75161 1426 aaPredicted RBP22.65■■□□□ 1.22
SNX21-210ENST00000478230 NAIPQ13075 1403 aa22.65■■□□□ 1.22
SNX21-210ENST00000478230 POLR1AO95602 1720 aaPredicted RBP22.64■■□□□ 1.21
SNX21-210ENST00000478230 GCC2Q8IWJ2 1684 aa22.64■■□□□ 1.21
SNX21-210ENST00000478230 HFM1A2PYH4 1435 aa22.64■■□□□ 1.21
SNX21-210ENST00000478230 IQGAP3Q86VI3 1631 aa22.64■■□□□ 1.21
SNX21-210ENST00000478230 UBR1Q8IWV7 1749 aa22.62■■□□□ 1.21
SNX21-210ENST00000478230 KDM5AP29375 1690 aaKnown RBP22.62■■□□□ 1.21
SNX21-210ENST00000478230 TRIM52Q96A61 297 aa22.61■■□□□ 1.21
SNX21-210ENST00000478230 SLIT1O75093 1534 aa22.61■■□□□ 1.21
SNX21-210ENST00000478230 TMEM2Q9UHN6 1383 aa22.61■■□□□ 1.21
SNX21-210ENST00000478230 SCAF11Q99590 1463 aaKnown RBP22.6■■□□□ 1.21
SNX21-210ENST00000478230 ZNF335Q9H4Z2 1342 aaPredicted RBP22.6■■□□□ 1.21
SNX21-210ENST00000478230 IQSEC2Q5JU85 1478 aa22.6■■□□□ 1.21
SNX21-210ENST00000478230 PIK3C2BO00750 1634 aa22.59■■□□□ 1.21
SNX21-210ENST00000478230 ARHGAP23Q9P227 1491 aa22.59■■□□□ 1.21
SNX21-210ENST00000478230 SYNMO15061 1565 aa22.59■■□□□ 1.21
SNX21-210ENST00000478230 NEURL4Q96JN8 1562 aa22.58■■□□□ 1.2
SNX21-210ENST00000478230 LTBP4Q8N2S1 1624 aa22.57■■□□□ 1.2
SNX21-210ENST00000478230 LTKP29376 864 aa22.56■■□□□ 1.2
SNX21-210ENST00000478230 CHGAP10645 457 aaKnown RBP22.55■■□□□ 1.2
SNX21-210ENST00000478230 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.55■■□□□ 1.2
SNX21-210ENST00000478230 ADGRB3O60242 1522 aa22.54■■□□□ 1.2
SNX21-210ENST00000478230 E9PCH4 1651 aa22.53■■□□□ 1.2
SNX21-210ENST00000478230 IQGAP1P46940 1657 aa22.53■■□□□ 1.2
SNX21-210ENST00000478230 CPS1P31327 1500 aa22.52■■□□□ 1.19
SNX21-210ENST00000478230 SLC4A1APQ9BWU0 796 aaKnown RBP22.51■■□□□ 1.19
SNX21-210ENST00000478230 PPP1R15AO75807 674 aaPredicted RBP22.5■■□□□ 1.19
SNX21-210ENST00000478230 BCANQ96GW7 911 aa22.5■■□□□ 1.19
SNX21-210ENST00000478230 RIMS2Q9UQ26 1411 aa22.45■■□□□ 1.18
SNX21-210ENST00000478230 TMEM131LA2VDJ0 1609 aa22.43■■□□□ 1.18
SNX21-210ENST00000478230 SETD5Q9C0A6 1442 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms