RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 FAM135AQ9P2D6 1515 aa26.56■■□□□ 1.84
TRIM13-208ENST00000478111 PKD2Q13563 968 aa26.56■■□□□ 1.84
TRIM13-208ENST00000478111 DNMT1P26358 1616 aaKnown RBP26.56■■□□□ 1.84
TRIM13-208ENST00000478111 A2ML1A8K2U0 1454 aa26.55■■□□□ 1.84
TRIM13-208ENST00000478111 IQSEC2Q5JU85 1478 aa26.55■■□□□ 1.84
TRIM13-208ENST00000478111 KDM5DQ9BY66 1539 aa26.55■■□□□ 1.84
TRIM13-208ENST00000478111 FBXO31Q5XUX0 539 aaPredicted RBP26.55■■□□□ 1.84
TRIM13-208ENST00000478111 TSPY4P0CV99 314 aa26.54■■□□□ 1.84
TRIM13-208ENST00000478111 TSPY10P0CW01 314 aa26.54■■□□□ 1.84
TRIM13-208ENST00000478111 PZPP20742 1482 aa26.53■■□□□ 1.84
TRIM13-208ENST00000478111 MAST1Q9Y2H9 1570 aa26.53■■□□□ 1.84
TRIM13-208ENST00000478111 ZNF335Q9H4Z2 1342 aaPredicted RBP26.51■■□□□ 1.83
TRIM13-208ENST00000478111 WASHC2CQ9Y4E1 1318 aa26.51■■□□□ 1.83
TRIM13-208ENST00000478111 TNRQ92752 1358 aa26.49■■□□□ 1.83
TRIM13-208ENST00000478111 RNF17Q9BXT8 1623 aaKnown RBP26.47■■□□□ 1.83
TRIM13-208ENST00000478111 MYOM3Q5VTT5 1437 aa26.47■■□□□ 1.83
TRIM13-208ENST00000478111 MIA2Q96PC5 1412 aa26.47■■□□□ 1.83
TRIM13-208ENST00000478111 POLR1AO95602 1720 aaPredicted RBP26.45■■□□□ 1.82
TRIM13-208ENST00000478111 NEURL4Q96JN8 1562 aa26.43■■□□□ 1.82
TRIM13-208ENST00000478111 EIF2AK4Q9P2K8 1649 aaKnown RBP26.42■■□□□ 1.82
TRIM13-208ENST00000478111 ABCC3O15438 1527 aa26.4■■□□□ 1.82
TRIM13-208ENST00000478111 MROH1Q8NDA8 1641 aa26.4■■□□□ 1.82
TRIM13-208ENST00000478111 ZC3H13Q5T200 1668 aaKnown RBP26.39■■□□□ 1.82
TRIM13-208ENST00000478111 NLRP1Q9C000 1473 aa26.38■■□□□ 1.81
TRIM13-208ENST00000478111 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.36■■□□□ 1.81
TRIM13-208ENST00000478111 UGGT1Q9NYU2 1555 aa26.35■■□□□ 1.81
TRIM13-208ENST00000478111 CFAP65Q6ZU64 1925 aaKnown RBP26.35■■□□□ 1.81
TRIM13-208ENST00000478111 CEP152O94986 1710 aa26.34■■□□□ 1.81
TRIM13-208ENST00000478111 SPATA31D1Q6ZQQ2 1576 aa26.34■■□□□ 1.81
TRIM13-208ENST00000478111 DUOX2Q9NRD8 1548 aa26.34■■□□□ 1.81
TRIM13-208ENST00000478111 THEMISQ8N1K5 641 aaPredicted RBP26.33■■□□□ 1.81
TRIM13-208ENST00000478111 CROCC2H7BZ55 1655 aa26.33■■□□□ 1.81
TRIM13-208ENST00000478111 ANKLE2Q86XL3 938 aa26.32■■□□□ 1.8
TRIM13-208ENST00000478111 PTPN23Q9H3S7 1636 aa26.32■■□□□ 1.8
TRIM13-208ENST00000478111 ABCC5O15440 1437 aa26.31■■□□□ 1.8
TRIM13-208ENST00000478111 UBAP1LF5GYI3 381 aa26.31■■□□□ 1.8
TRIM13-208ENST00000478111 DEPDC5O75140 1603 aa26.31■■□□□ 1.8
TRIM13-208ENST00000478111 DISP3Q9P2K9 1392 aa26.31■■□□□ 1.8
TRIM13-208ENST00000478111 MED14O60244 1454 aa26.3■■□□□ 1.8
TRIM13-208ENST00000478111 ERVK-7P63135 1459 aa26.3■■□□□ 1.8
TRIM13-208ENST00000478111 SHANK2Q9UPX8 1470 aa26.3■■□□□ 1.8
TRIM13-208ENST00000478111 VWDEQ8N2E2 1590 aa26.27■■□□□ 1.8
TRIM13-208ENST00000478111 KIF15Q9NS87 1388 aa26.26■■□□□ 1.79
TRIM13-208ENST00000478111 ILDR2Q71H61 639 aa26.26■■□□□ 1.79
TRIM13-208ENST00000478111 CPS1P31327 1500 aa26.25■■□□□ 1.79
TRIM13-208ENST00000478111 NPHP4O75161 1426 aaPredicted RBP26.25■■□□□ 1.79
TRIM13-208ENST00000478111 PRDM15P57071 1507 aaPredicted RBP26.24■■□□□ 1.79
TRIM13-208ENST00000478111 APLP2Q06481 763 aa26.24■■□□□ 1.79
TRIM13-208ENST00000478111 DAPK1P53355 1430 aa26.23■■□□□ 1.79
TRIM13-208ENST00000478111 FGD6Q6ZV73 1430 aa26.23■■□□□ 1.79
TRIM13-208ENST00000478111 ERBINQ96RT1 1412 aa26.23■■□□□ 1.79
TRIM13-208ENST00000478111 RRP7BPQ9NSQ0 103 aa26.23■■□□□ 1.79
TRIM13-208ENST00000478111 UBR1Q8IWV7 1749 aa26.22■■□□□ 1.79
TRIM13-208ENST00000478111 IQGAP1P46940 1657 aa26.22■■□□□ 1.79
TRIM13-208ENST00000478111 ARHGAP31Q2M1Z3 1444 aa26.21■■□□□ 1.79
TRIM13-208ENST00000478111 STRCP1A6NGW2 1772 aa26.18■■□□□ 1.78
TRIM13-208ENST00000478111 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.13■■□□□ 1.77
TRIM13-208ENST00000478111 CHIC2Q9UKJ5 165 aa26.13■■□□□ 1.77
TRIM13-208ENST00000478111 ALKQ9UM73 1620 aa26.12■■□□□ 1.77
TRIM13-208ENST00000478111 ARHGAP23Q9P227 1491 aa26.11■■□□□ 1.77
TRIM13-208ENST00000478111 SLIT1O75093 1534 aa26.11■■□□□ 1.77
TRIM13-208ENST00000478111 TOM1O60784 492 aa26.11■■□□□ 1.77
TRIM13-208ENST00000478111 ANKRD30AQ9BXX3 1397 aa26.1■■□□□ 1.77
TRIM13-208ENST00000478111 LTKP29376 864 aa26.1■■□□□ 1.77
TRIM13-208ENST00000478111 PIK3C2BO00750 1634 aa26.09■■□□□ 1.77
TRIM13-208ENST00000478111 SCAF11Q99590 1463 aaKnown RBP26.09■■□□□ 1.77
TRIM13-208ENST00000478111 LMTK2Q8IWU2 1503 aa26.09■■□□□ 1.77
TRIM13-208ENST00000478111 PIP4K2BP78356 416 aa26.08■■□□□ 1.77
TRIM13-208ENST00000478111 HSPA1LP34931 641 aa26.07■■□□□ 1.76
TRIM13-208ENST00000478111 LRRC7Q96NW7 1537 aa26.07■■□□□ 1.76
TRIM13-208ENST00000478111 KANK1Q14678 1352 aa26.07■■□□□ 1.76
TRIM13-208ENST00000478111 ADGRL2O95490 1459 aa26.05■■□□□ 1.76
TRIM13-208ENST00000478111 SOCS7O14512 581 aa26.05■■□□□ 1.76
TRIM13-208ENST00000478111 SCAF1Q9H7N4 1312 aaKnown RBP26.05■■□□□ 1.76
TRIM13-208ENST00000478111 TXNDC2Q86VQ3 553 aa26.04■■□□□ 1.76
TRIM13-208ENST00000478111 SYNMO15061 1565 aa26.03■■□□□ 1.76
TRIM13-208ENST00000478111 KDM5AP29375 1690 aaKnown RBP26.03■■□□□ 1.76
TRIM13-208ENST00000478111 TMEM2Q9UHN6 1383 aa26■■□□□ 1.75
TRIM13-208ENST00000478111 IDI1Q13907 227 aa26■■□□□ 1.75
TRIM13-208ENST00000478111 EFCAB6Q5THR3 1501 aa25.99■■□□□ 1.75
TRIM13-208ENST00000478111 NOS1P29475 1434 aa25.98■■□□□ 1.75
TRIM13-208ENST00000478111 XIRP1Q702N8 1843 aaKnown RBP25.98■■□□□ 1.75
TRIM13-208ENST00000478111 FAM50AQ14320 339 aaKnown RBP25.97■■□□□ 1.75
TRIM13-208ENST00000478111 EID1Q9Y6B2 187 aa25.96■■□□□ 1.75
TRIM13-208ENST00000478111 ANKRD50Q9ULJ7 1429 aa25.94■■□□□ 1.74
TRIM13-208ENST00000478111 STAG3Q9UJ98 1225 aa25.93■■□□□ 1.74
TRIM13-208ENST00000478111 MED1Q15648 1581 aaPredicted RBP25.92■■□□□ 1.74
TRIM13-208ENST00000478111 TET3O43151 1660 aa25.91■■□□□ 1.74
TRIM13-208ENST00000478111 ADGRB3O60242 1522 aa25.89■■□□□ 1.74
TRIM13-208ENST00000478111 RPRD2Q5VT52 1461 aaKnown RBP25.88■■□□□ 1.73
TRIM13-208ENST00000478111 SLC52A1Q9NWF4 448 aa25.88■■□□□ 1.73
TRIM13-208ENST00000478111 MYO5BQ9ULV0 1848 aa25.86■■□□□ 1.73
TRIM13-208ENST00000478111 UNC13BO14795 1591 aa25.84■■□□□ 1.73
TRIM13-208ENST00000478111 GCC2Q8IWJ2 1684 aa25.83■■□□□ 1.73
TRIM13-208ENST00000478111 SLC26A8Q96RN1 970 aa25.83■■□□□ 1.73
TRIM13-208ENST00000478111 KCNA6P17658 529 aa25.81■■□□□ 1.72
TRIM13-208ENST00000478111 SENP3Q9H4L4 574 aaPredicted RBP25.8■■□□□ 1.72
TRIM13-208ENST00000478111 TMEM131LA2VDJ0 1609 aa25.79■■□□□ 1.72
TRIM13-208ENST00000478111 TMEM94Q12767 1356 aa25.79■■□□□ 1.72
TRIM13-208ENST00000478111 ROCK1Q13464 1354 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms