RNA–Protein interactions for RNA: ENST00000477926.1

CPA3-202, Transcript of carboxypeptidase A3, humanhuman

TSL 3

Gene CPA3, Length 546 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA3-202ENST00000477926 TSR1Q2NL82 804 aaKnown RBP11.43□□□□□ -0.58
CPA3-202ENST00000477926 PLEKHG3A1L390 1219 aa11.42□□□□□ -0.58
CPA3-202ENST00000477926 FOSBP53539 338 aa11.4□□□□□ -0.58
CPA3-202ENST00000477926 DOK7Q18PE1 504 aa11.39□□□□□ -0.59
CPA3-202ENST00000477926 CERKQ8TCT0 537 aa11.39□□□□□ -0.59
CPA3-202ENST00000477926 GIGYF2Q6Y7W6 1299 aaKnown RBP11.38□□□□□ -0.59
CPA3-202ENST00000477926 POTEJP0CG39 1038 aa11.37□□□□□ -0.59
CPA3-202ENST00000477926 C6orf132Q5T0Z8 1188 aa11.37□□□□□ -0.59
CPA3-202ENST00000477926 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
CPA3-202ENST00000477926 CLCN1P35523 988 aa11.36□□□□□ -0.59
CPA3-202ENST00000477926 ZNF454Q8N9F8 522 aa11.36□□□□□ -0.59
CPA3-202ENST00000477926 REPIN1Q9BWE0 567 aaKnown RBP11.36□□□□□ -0.59
CPA3-202ENST00000477926 ZSWIM6Q9HCJ5 1215 aa11.36□□□□□ -0.59
CPA3-202ENST00000477926 RIMBP2O15034 1052 aa11.35□□□□□ -0.59
CPA3-202ENST00000477926 NUDT7P0C024 238 aa11.35□□□□□ -0.59
CPA3-202ENST00000477926 HOXB3P14651 431 aaPredicted RBP11.35□□□□□ -0.59
CPA3-202ENST00000477926 ARSIQ5FYB1 569 aa11.35□□□□□ -0.59
CPA3-202ENST00000477926 TMUB1Q9BVT8 246 aa11.35□□□□□ -0.59
CPA3-202ENST00000477926 GOPCQ9HD26 462 aa11.35□□□□□ -0.59
CPA3-202ENST00000477926 MS4A1P11836 297 aa11.34□□□□□ -0.59
CPA3-202ENST00000477926 PHOX2BQ99453 314 aa11.34□□□□□ -0.59
CPA3-202ENST00000477926 OATP04181 439 aa11.33□□□□□ -0.6
CPA3-202ENST00000477926 KHSRPQ92945 711 aaKnown RBP eCLIP11.33□□□□□ -0.6
CPA3-202ENST00000477926 GPCPD1Q9NPB8 672 aa11.33□□□□□ -0.6
CPA3-202ENST00000477926 POTEB2H3BUK9 544 aa11.32□□□□□ -0.6
CPA3-202ENST00000477926 MDM2Q00987 491 aaPredicted RBP11.32□□□□□ -0.6
CPA3-202ENST00000477926 GPR153Q6NV75 609 aa11.32□□□□□ -0.6
CPA3-202ENST00000477926 PADI6Q6TGC4 694 aa11.31□□□□□ -0.6
CPA3-202ENST00000477926 RBM27Q9P2N5 1060 aaKnown RBP11.31□□□□□ -0.6
CPA3-202ENST00000477926 METTL3Q86U44 580 aaKnown RBP11.3□□□□□ -0.6
CPA3-202ENST00000477926 ADAM33Q9BZ11 813 aa11.3□□□□□ -0.6
CPA3-202ENST00000477926 SSTR3P32745 418 aaPredicted RBP11.29□□□□□ -0.6
CPA3-202ENST00000477926 FAM161AQ3B820 660 aa11.29□□□□□ -0.6
CPA3-202ENST00000477926 MAMSTRQ6ZN01 415 aa11.29□□□□□ -0.6
CPA3-202ENST00000477926 TTC13Q8NBP0 860 aa11.29□□□□□ -0.6
CPA3-202ENST00000477926 SCUBE2Q9NQ36 999 aa11.29□□□□□ -0.6
CPA3-202ENST00000477926 ADGRG1Q9Y653 693 aa11.29□□□□□ -0.6
CPA3-202ENST00000477926 ZNF710Q8N1W2 664 aa11.28□□□□□ -0.6
CPA3-202ENST00000477926 PRSS12P56730 875 aa11.27□□□□□ -0.61
CPA3-202ENST00000477926 PXYLP1Q8TE99 480 aa11.27□□□□□ -0.61
CPA3-202ENST00000477926 PCMTD1Q96MG8 357 aaPredicted RBP11.26□□□□□ -0.61
CPA3-202ENST00000477926 ZMYND15Q9H091 742 aa11.26□□□□□ -0.61
CPA3-202ENST00000477926 SUPT5HO00267 1087 aaKnown RBP11.25□□□□□ -0.61
CPA3-202ENST00000477926 ARXQ96QS3 562 aa11.25□□□□□ -0.61
CPA3-202ENST00000477926 LHX6Q9UPM6 363 aa11.25□□□□□ -0.61
CPA3-202ENST00000477926 PSDA5PKW4 1024 aaPredicted RBP11.24□□□□□ -0.61
CPA3-202ENST00000477926 CDCA7LQ96GN5 454 aa11.24□□□□□ -0.61
CPA3-202ENST00000477926 RSPH6AQ9H0K4 717 aa11.24□□□□□ -0.61
CPA3-202ENST00000477926 FAM217BQ9NTX9 383 aaPredicted RBP11.24□□□□□ -0.61
CPA3-202ENST00000477926 SH3D19Q5HYK7 790 aa11.23□□□□□ -0.61
CPA3-202ENST00000477926 PPP4R3BQ5MIZ7 849 aa11.23□□□□□ -0.61
CPA3-202ENST00000477926 RBM46Q8TBY0 533 aaKnown RBP11.22□□□□□ -0.61
CPA3-202ENST00000477926 BEGAINQ9BUH8 593 aa11.22□□□□□ -0.61
CPA3-202ENST00000477926 NLRP7Q8WX94 980 aa11.21□□□□□ -0.61
CPA3-202ENST00000477926 FLIIQ13045 1269 aa11.2□□□□□ -0.62
CPA3-202ENST00000477926 SKIV2LQ15477 1246 aaKnown RBP11.2□□□□□ -0.62
CPA3-202ENST00000477926 BCL2L12Q9HB09 334 aa11.2□□□□□ -0.62
CPA3-202ENST00000477926 SNPHO15079 494 aa11.19□□□□□ -0.62
CPA3-202ENST00000477926 COL9A1P20849 921 aa11.18□□□□□ -0.62
CPA3-202ENST00000477926 PTPREP23469 700 aa11.17□□□□□ -0.62
CPA3-202ENST00000477926 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.16□□□□□ -0.62
CPA3-202ENST00000477926 EYA1Q99502 592 aa11.16□□□□□ -0.62
CPA3-202ENST00000477926 FAM198AQ9UFP1 575 aa11.16□□□□□ -0.62
CPA3-202ENST00000477926 PPP1R3GB7ZBB8 358 aa11.15□□□□□ -0.62
CPA3-202ENST00000477926 HOXB1P14653 301 aaPredicted RBP11.15□□□□□ -0.62
CPA3-202ENST00000477926 ONECUT3O60422 494 aaPredicted RBP11.14□□□□□ -0.63
CPA3-202ENST00000477926 RCCD1A6NED2 376 aa11.13□□□□□ -0.63
CPA3-202ENST00000477926 TSKSQ9UJT2 592 aa11.13□□□□□ -0.63
CPA3-202ENST00000477926 DIXDC1Q155Q3 683 aa11.12□□□□□ -0.63
CPA3-202ENST00000477926 POLR3EQ9NVU0 708 aa11.12□□□□□ -0.63
CPA3-202ENST00000477926 MYSM1Q5VVJ2 828 aa11.11□□□□□ -0.63
CPA3-202ENST00000477926 NUDT18Q6ZVK8 323 aa11.11□□□□□ -0.63
CPA3-202ENST00000477926 PROCA1Q8NCQ7 364 aaPredicted RBP11.11□□□□□ -0.63
CPA3-202ENST00000477926 ATP1B4Q9UN42 357 aaPredicted RBP11.11□□□□□ -0.63
CPA3-202ENST00000477926 PACS2Q86VP3 889 aa11.1□□□□□ -0.63
CPA3-202ENST00000477926 TBC1D2Q9BYX2 928 aa11.1□□□□□ -0.63
CPA3-202ENST00000477926 TRIM6-TRIM34B2RNG4 842 aa11.09□□□□□ -0.63
CPA3-202ENST00000477926 NBPF26B4DH59 902 aa11.09□□□□□ -0.63
CPA3-202ENST00000477926 HOMEZQ8IX15 550 aa11.09□□□□□ -0.63
CPA3-202ENST00000477926 TATDN2Q93075 761 aa11.09□□□□□ -0.63
CPA3-202ENST00000477926 PNMA3Q9UL41 463 aa11.08□□□□□ -0.64
CPA3-202ENST00000477926 DNAJB2P25686 324 aa11.07□□□□□ -0.64
CPA3-202ENST00000477926 SULF1Q8IWU6 871 aa11.07□□□□□ -0.64
CPA3-202ENST00000477926 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.07□□□□□ -0.64
CPA3-202ENST00000477926 C3orf80F5H4A9 247 aa11.06□□□□□ -0.64
CPA3-202ENST00000477926 CD46P15529 392 aa11.06□□□□□ -0.64
CPA3-202ENST00000477926 CLK2P49760 499 aaKnown RBP11.06□□□□□ -0.64
CPA3-202ENST00000477926 SPIRE2Q8WWL2 714 aa11.04□□□□□ -0.64
CPA3-202ENST00000477926 KCNH8Q96L42 1107 aa11.04□□□□□ -0.64
CPA3-202ENST00000477926 KCNK17Q96T54 332 aa11.04□□□□□ -0.64
CPA3-202ENST00000477926 TMEM134Q9H6X4 195 aa11.04□□□□□ -0.64
CPA3-202ENST00000477926 A6NJR5 290 aa11.03□□□□□ -0.64
CPA3-202ENST00000477926 MCM6Q14566 821 aa11.03□□□□□ -0.64
CPA3-202ENST00000477926 DDX11L8A8MPP1 907 aa11.02□□□□□ -0.65
CPA3-202ENST00000477926 PROX2Q3B8N5 592 aa11.02□□□□□ -0.65
CPA3-202ENST00000477926 RIC3Q7Z5B4 369 aa11.02□□□□□ -0.65
CPA3-202ENST00000477926 UBTFP17480 764 aaKnown RBP11.01□□□□□ -0.65
CPA3-202ENST00000477926 NUTM1Q86Y26 1132 aa11.01□□□□□ -0.65
CPA3-202ENST00000477926 OTUD5Q96G74 571 aa11.01□□□□□ -0.65
CPA3-202ENST00000477926 SMAPO00193 183 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms