RNA–Protein interactions for RNA: ENST00000477833.5

ARHGEF3-209, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-209ENST00000477833 TSPY10P0CW01 314 aa7.78□□□□□ -1.16
ARHGEF3-209ENST00000477833 RSPH4AQ5TD94 716 aa7.78□□□□□ -1.16
ARHGEF3-209ENST00000477833 MROH1Q8NDA8 1641 aa7.78□□□□□ -1.16
ARHGEF3-209ENST00000477833 DIP2CQ9Y2E4 1556 aa7.77□□□□□ -1.17
ARHGEF3-209ENST00000477833 COL17A1Q9UMD9 1497 aaPredicted RBP7.77□□□□□ -1.17
ARHGEF3-209ENST00000477833 DEPDC5O75140 1603 aa7.77□□□□□ -1.17
ARHGEF3-209ENST00000477833 ZMYM4Q5VZL5 1548 aa7.77□□□□□ -1.17
ARHGEF3-209ENST00000477833 ERBINQ96RT1 1412 aa7.77□□□□□ -1.17
ARHGEF3-209ENST00000477833 SPAG9O60271 1321 aaKnown RBP7.77□□□□□ -1.17
ARHGEF3-209ENST00000477833 MLH3Q9UHC1 1453 aa7.76□□□□□ -1.17
ARHGEF3-209ENST00000477833 IQGAP3Q86VI3 1631 aa7.76□□□□□ -1.17
ARHGEF3-209ENST00000477833 CLSPNQ9HAW4 1339 aa7.76□□□□□ -1.17
ARHGEF3-209ENST00000477833 SIGLEC1Q9BZZ2 1709 aa7.75□□□□□ -1.17
ARHGEF3-209ENST00000477833 EIF2AK4Q9P2K8 1649 aaKnown RBP7.75□□□□□ -1.17
ARHGEF3-209ENST00000477833 FAM135AQ9P2D6 1515 aa7.75□□□□□ -1.17
ARHGEF3-209ENST00000477833 RAPGEF3O95398 923 aa7.75□□□□□ -1.17
ARHGEF3-209ENST00000477833 ZEB1P37275 1124 aaPredicted RBP7.75□□□□□ -1.17
ARHGEF3-209ENST00000477833 TRIM52Q96A61 297 aa7.75□□□□□ -1.17
ARHGEF3-209ENST00000477833 YEATS2Q9ULM3 1422 aa7.75□□□□□ -1.17
ARHGEF3-209ENST00000477833 TEX14Q8IWB6 1497 aa7.75□□□□□ -1.17
ARHGEF3-209ENST00000477833 RNF17Q9BXT8 1623 aaKnown RBP7.74□□□□□ -1.17
ARHGEF3-209ENST00000477833 SIN3AQ96ST3 1273 aa7.74□□□□□ -1.17
ARHGEF3-209ENST00000477833 MPHOSPH9Q99550 1183 aa7.74□□□□□ -1.17
ARHGEF3-209ENST00000477833 VWDEQ8N2E2 1590 aa7.74□□□□□ -1.17
ARHGEF3-209ENST00000477833 BCORL1Q5H9F3 1711 aa7.74□□□□□ -1.17
ARHGEF3-209ENST00000477833 PRDM15P57071 1507 aaPredicted RBP7.73□□□□□ -1.17
ARHGEF3-209ENST00000477833 A2MP01023 1474 aa7.73□□□□□ -1.17
ARHGEF3-209ENST00000477833 ARHGEF40Q8TER5 1519 aa7.73□□□□□ -1.17
ARHGEF3-209ENST00000477833 NUP155O75694 1391 aa7.72□□□□□ -1.17
ARHGEF3-209ENST00000477833 DHX29Q7Z478 1369 aaKnown RBP7.72□□□□□ -1.17
ARHGEF3-209ENST00000477833 ANKRD30BQ9BXX2 1392 aa7.72□□□□□ -1.17
ARHGEF3-209ENST00000477833 E9PCH4 1651 aa7.71□□□□□ -1.18
ARHGEF3-209ENST00000477833 CEP152O94986 1710 aa7.71□□□□□ -1.18
ARHGEF3-209ENST00000477833 TET3O43151 1660 aa7.7□□□□□ -1.18
ARHGEF3-209ENST00000477833 PLA2R1Q13018 1463 aa7.7□□□□□ -1.18
ARHGEF3-209ENST00000477833 SLC4A1APQ9BWU0 796 aaKnown RBP7.7□□□□□ -1.18
ARHGEF3-209ENST00000477833 REREQ9P2R6 1566 aa7.69□□□□□ -1.18
ARHGEF3-209ENST00000477833 PKD2Q13563 968 aa7.69□□□□□ -1.18
ARHGEF3-209ENST00000477833 RPRD2Q5VT52 1461 aaKnown RBP7.68□□□□□ -1.18
ARHGEF3-209ENST00000477833 EFCAB6Q5THR3 1501 aa7.68□□□□□ -1.18
ARHGEF3-209ENST00000477833 NEUROD1Q13562 356 aa7.68□□□□□ -1.18
ARHGEF3-209ENST00000477833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.68□□□□□ -1.184e-7■■□□□ 12.8
ARHGEF3-209ENST00000477833 ABCC3O15438 1527 aa7.68□□□□□ -1.18
ARHGEF3-209ENST00000477833 LMTK2Q8IWU2 1503 aa7.68□□□□□ -1.18
ARHGEF3-209ENST00000477833 KIF3BO15066 747 aa7.67□□□□□ -1.18
ARHGEF3-209ENST00000477833 MYT1LQ9UL68 1186 aa7.67□□□□□ -1.18
ARHGEF3-209ENST00000477833 ATP10AO60312 1499 aa7.67□□□□□ -1.18
ARHGEF3-209ENST00000477833 SPHKAPQ2M3C7 1700 aa7.66□□□□□ -1.18
ARHGEF3-209ENST00000477833 ACIN1Q9UKV3 1341 aaKnown RBP7.66□□□□□ -1.18
ARHGEF3-209ENST00000477833 CAMSAP1Q5T5Y3 1602 aa7.66□□□□□ -1.18
ARHGEF3-209ENST00000477833 DCAF8L1A6NGE4 600 aa7.65□□□□□ -1.18
ARHGEF3-209ENST00000477833 TRPM2O94759 1503 aa7.65□□□□□ -1.18
ARHGEF3-209ENST00000477833 AGLP35573 1532 aa7.65□□□□□ -1.18
ARHGEF3-209ENST00000477833 CLTCL1P53675 1640 aa7.65□□□□□ -1.18
ARHGEF3-209ENST00000477833 UGGT1Q9NYU2 1555 aa7.65□□□□□ -1.18
ARHGEF3-209ENST00000477833 ZC3H13Q5T200 1668 aaKnown RBP7.64□□□□□ -1.19
ARHGEF3-209ENST00000477833 PTPRTO14522 1441 aa7.63□□□□□ -1.19
ARHGEF3-209ENST00000477833 NPATQ14207 1427 aa7.63□□□□□ -1.19
ARHGEF3-209ENST00000477833 TONSLQ96HA7 1378 aa7.63□□□□□ -1.19
ARHGEF3-209ENST00000477833 TRHP20396 242 aaPredicted RBP7.63□□□□□ -1.19
ARHGEF3-209ENST00000477833 MROH2AA6NES4 1674 aa7.63□□□□□ -1.19
ARHGEF3-209ENST00000477833 L3MBTL2Q969R5 705 aa7.62□□□□□ -1.19
ARHGEF3-209ENST00000477833 SYNMO15061 1565 aa7.62□□□□□ -1.19
ARHGEF3-209ENST00000477833 KANK1Q14678 1352 aa7.61□□□□□ -1.19
ARHGEF3-209ENST00000477833 CLTCQ00610 1675 aaKnown RBP7.61□□□□□ -1.19
ARHGEF3-209ENST00000477833 PPP1R15AO75807 674 aaPredicted RBP7.61□□□□□ -1.19
ARHGEF3-209ENST00000477833 CCDC144AA2RUR9 1427 aa7.61□□□□□ -1.19
ARHGEF3-209ENST00000477833 SPATA31E1Q6ZUB1 1445 aa7.61□□□□□ -1.19
ARHGEF3-209ENST00000477833 PIK3C2BO00750 1634 aa7.6□□□□□ -1.19
ARHGEF3-209ENST00000477833 GGT6Q6P531 493 aa7.6□□□□□ -1.19
ARHGEF3-209ENST00000477833 TIMELESSQ9UNS1 1208 aa7.6□□□□□ -1.19
ARHGEF3-209ENST00000477833 CFAP65Q6ZU64 1925 aaKnown RBP7.6□□□□□ -1.19
ARHGEF3-209ENST00000477833 PREX1Q8TCU6 1659 aa7.6□□□□□ -1.19
ARHGEF3-209ENST00000477833 NBPF8Q3BBV2 869 aa7.59□□□□□ -1.19
ARHGEF3-209ENST00000477833 NOS1P29475 1434 aa7.59□□□□□ -1.19
ARHGEF3-209ENST00000477833 ARHGAP31Q2M1Z3 1444 aa7.59□□□□□ -1.19
ARHGEF3-209ENST00000477833 IFT172Q9UG01 1749 aa7.58□□□□□ -1.2
ARHGEF3-209ENST00000477833 ADGRB3O60242 1522 aa7.58□□□□□ -1.2
ARHGEF3-209ENST00000477833 MADDQ8WXG6 1647 aa7.57□□□□□ -1.2
ARHGEF3-209ENST00000477833 UHRF1BP1Q6BDS2 1440 aa7.57□□□□□ -1.2
ARHGEF3-209ENST00000477833 CNTLNQ9NXG0 1405 aa7.57□□□□□ -1.2
ARHGEF3-209ENST00000477833 NEURL4Q96JN8 1562 aa7.57□□□□□ -1.2
ARHGEF3-209ENST00000477833 ERVK-7P63135 1459 aa7.56□□□□□ -1.2
ARHGEF3-209ENST00000477833 WASHC2CQ9Y4E1 1318 aa7.56□□□□□ -1.2
ARHGEF3-209ENST00000477833 KIF1BO60333 1816 aa7.56□□□□□ -1.2
ARHGEF3-209ENST00000477833 MYO5BQ9ULV0 1848 aa7.56□□□□□ -1.2
ARHGEF3-209ENST00000477833 TRPM1Q7Z4N2 1603 aa7.56□□□□□ -1.2
ARHGEF3-209ENST00000477833 RALGAPBQ86X10 1494 aa7.55□□□□□ -1.2
ARHGEF3-209ENST00000477833 SPATA31D1Q6ZQQ2 1576 aa7.55□□□□□ -1.2
ARHGEF3-209ENST00000477833 PRAG1Q86YV5 1406 aa7.55□□□□□ -1.2
ARHGEF3-209ENST00000477833 MLECQ14165 292 aa7.55□□□□□ -1.2
ARHGEF3-209ENST00000477833 FER1L4A9Z1Z3 1794 aa7.54□□□□□ -1.2
ARHGEF3-209ENST00000477833 ZNF316A6NFI3 1004 aaPredicted RBP7.54□□□□□ -1.2
ARHGEF3-209ENST00000477833 PPLO60437 1756 aa7.54□□□□□ -1.2
ARHGEF3-209ENST00000477833 TMEM131LA2VDJ0 1609 aa7.53□□□□□ -1.2
ARHGEF3-209ENST00000477833 RGL3Q3MIN7 710 aa7.53□□□□□ -1.2
ARHGEF3-209ENST00000477833 FBXO31Q5XUX0 539 aaPredicted RBP7.53□□□□□ -1.2
ARHGEF3-209ENST00000477833 C3P01024 1663 aa7.53□□□□□ -1.2
ARHGEF3-209ENST00000477833 NEXMIFQ5QGS0 1516 aa7.52□□□□□ -1.2
ARHGEF3-209ENST00000477833 MYOM2P54296 1465 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms