RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 DNMT1P26358 1616 aaKnown RBP35.46■■■■□ 3.27
CNIH4-208ENST00000477413 GGT6Q6P531 493 aa35.45■■■■□ 3.27
CNIH4-208ENST00000477413 MYO3AQ8NEV4 1616 aa35.43■■■■□ 3.26
CNIH4-208ENST00000477413 ABCC5O15440 1437 aa35.4■■■■□ 3.26
CNIH4-208ENST00000477413 DUOX2Q9NRD8 1548 aa35.39■■■■□ 3.26
CNIH4-208ENST00000477413 ZC3H13Q5T200 1668 aaKnown RBP35.39■■■■□ 3.26
CNIH4-208ENST00000477413 KIF3BO15066 747 aa35.38■■■■□ 3.25
CNIH4-208ENST00000477413 DAPK1P53355 1430 aa35.37■■■■□ 3.25
CNIH4-208ENST00000477413 MROH1Q8NDA8 1641 aa35.36■■■■□ 3.25
CNIH4-208ENST00000477413 PZPP20742 1482 aa35.35■■■■□ 3.25
CNIH4-208ENST00000477413 CEP170BQ9Y4F5 1589 aaPredicted RBP35.33■■■■□ 3.25
CNIH4-208ENST00000477413 NCOA1Q15788 1441 aa35.32■■■■□ 3.24
CNIH4-208ENST00000477413 ERBINQ96RT1 1412 aa35.3■■■■□ 3.24
CNIH4-208ENST00000477413 ABCC3O15438 1527 aa35.29■■■■□ 3.24
CNIH4-208ENST00000477413 PRDM15P57071 1507 aaPredicted RBP35.27■■■■□ 3.24
CNIH4-208ENST00000477413 KIF15Q9NS87 1388 aa35.27■■■■□ 3.24
CNIH4-208ENST00000477413 PTPRTO14522 1441 aa35.26■■■■□ 3.24
CNIH4-208ENST00000477413 PLA2R1Q13018 1463 aa35.26■■■■□ 3.23
CNIH4-208ENST00000477413 CAMSAP1Q5T5Y3 1602 aa35.25■■■■□ 3.23
CNIH4-208ENST00000477413 ILDR1Q86SU0 546 aaPredicted RBP35.25■■■■□ 3.23
CNIH4-208ENST00000477413 DEPDC5O75140 1603 aa35.24■■■■□ 3.23
CNIH4-208ENST00000477413 DMRT2Q9Y5R5 561 aa35.24■■■■□ 3.23
CNIH4-208ENST00000477413 A2ML1A8K2U0 1454 aa35.22■■■■□ 3.23
CNIH4-208ENST00000477413 ADGRL2O95490 1459 aa35.22■■■■□ 3.23
CNIH4-208ENST00000477413 WASHC2CQ9Y4E1 1318 aa35.22■■■■□ 3.23
CNIH4-208ENST00000477413 CEP152O94986 1710 aa35.17■■■■□ 3.22
CNIH4-208ENST00000477413 SPATA31D1Q6ZQQ2 1576 aa35.17■■■■□ 3.22
CNIH4-208ENST00000477413 TNRQ92752 1358 aa35.16■■■■□ 3.22
CNIH4-208ENST00000477413 ANKRD30AQ9BXX3 1397 aa35.15■■■■□ 3.22
CNIH4-208ENST00000477413 NLRP1Q9C000 1473 aa35.13■■■■□ 3.21
CNIH4-208ENST00000477413 FBXO41Q8TF61 875 aa35.1■■■■□ 3.21
CNIH4-208ENST00000477413 VWDEQ8N2E2 1590 aa35.09■■■■□ 3.21
CNIH4-208ENST00000477413 ARHGAP31Q2M1Z3 1444 aa35.08■■■■□ 3.21
CNIH4-208ENST00000477413 FBXO31Q5XUX0 539 aaPredicted RBP35.08■■■■□ 3.21
CNIH4-208ENST00000477413 ERVK-7P63135 1459 aa35.08■■■■□ 3.21
CNIH4-208ENST00000477413 RRP7BPQ9NSQ0 103 aa35.07■■■■□ 3.2
CNIH4-208ENST00000477413 LMTK2Q8IWU2 1503 aa35.06■■■■□ 3.2
CNIH4-208ENST00000477413 PKD2Q13563 968 aa35.04■■■■□ 3.2
CNIH4-208ENST00000477413 POLR1AO95602 1720 aaPredicted RBP35.03■■■■□ 3.2
CNIH4-208ENST00000477413 LTBP4Q8N2S1 1624 aa35.01■■■■□ 3.19
CNIH4-208ENST00000477413 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35■■■■□ 3.197e-7■■■■■ 52.8
CNIH4-208ENST00000477413 CERKQ8TCT0 537 aa34.99■■■■□ 3.19
CNIH4-208ENST00000477413 FAM50AQ14320 339 aaKnown RBP34.98■■■■□ 3.19
CNIH4-208ENST00000477413 UGGT1Q9NYU2 1555 aa34.98■■■■□ 3.19
CNIH4-208ENST00000477413 NEURL4Q96JN8 1562 aa34.97■■■■□ 3.19
CNIH4-208ENST00000477413 CHIC2Q9UKJ5 165 aa34.96■■■■□ 3.19
CNIH4-208ENST00000477413 ROCK1Q13464 1354 aa34.93■■■■□ 3.18
CNIH4-208ENST00000477413 KANK1Q14678 1352 aa34.93■■■■□ 3.18
CNIH4-208ENST00000477413 ANKRD50Q9ULJ7 1429 aa34.92■■■■□ 3.18
CNIH4-208ENST00000477413 NCKAP5LQ9HCH0 1330 aa34.92■■■■□ 3.18
CNIH4-208ENST00000477413 EFCAB6Q5THR3 1501 aa34.91■■■■□ 3.18
CNIH4-208ENST00000477413 IQSEC2Q5JU85 1478 aa34.91■■■■□ 3.18
CNIH4-208ENST00000477413 UBR1Q8IWV7 1749 aa34.89■■■■□ 3.18
CNIH4-208ENST00000477413 UNC13BO14795 1591 aa34.88■■■■□ 3.17
CNIH4-208ENST00000477413 CFAP65Q6ZU64 1925 aaKnown RBP34.87■■■■□ 3.17
CNIH4-208ENST00000477413 MED14O60244 1454 aa34.87■■■■□ 3.17
CNIH4-208ENST00000477413 THEMISQ8N1K5 641 aaPredicted RBP34.85■■■■□ 3.17
CNIH4-208ENST00000477413 KDM5AP29375 1690 aaKnown RBP34.85■■■■□ 3.17
CNIH4-208ENST00000477413 RPRD2Q5VT52 1461 aaKnown RBP34.81■■■■□ 3.16
CNIH4-208ENST00000477413 RRBP1Q9P2E9 1410 aaKnown RBP34.81■■■■□ 3.16
CNIH4-208ENST00000477413 TET3O43151 1660 aa34.8■■■■□ 3.16
CNIH4-208ENST00000477413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.78■■■■□ 3.16
CNIH4-208ENST00000477413 NOS1P29475 1434 aa34.78■■■■□ 3.16
CNIH4-208ENST00000477413 SYNMO15061 1565 aa34.78■■■■□ 3.16
CNIH4-208ENST00000477413 ARHGAP23Q9P227 1491 aa34.78■■■■□ 3.16
CNIH4-208ENST00000477413 SLIT1O75093 1534 aa34.77■■■■□ 3.16
CNIH4-208ENST00000477413 GCC2Q8IWJ2 1684 aa34.76■■■■□ 3.16
CNIH4-208ENST00000477413 PIK3C2BO00750 1634 aa34.76■■■■□ 3.15
CNIH4-208ENST00000477413 IQGAP1P46940 1657 aa34.76■■■■□ 3.15
CNIH4-208ENST00000477413 ANKLE2Q86XL3 938 aa34.75■■■■□ 3.15
CNIH4-208ENST00000477413 ZNF335Q9H4Z2 1342 aaPredicted RBP34.73■■■■□ 3.15
CNIH4-208ENST00000477413 IQGAP3Q86VI3 1631 aa34.72■■■■□ 3.15
CNIH4-208ENST00000477413 NPHP4O75161 1426 aaPredicted RBP34.72■■■■□ 3.15
CNIH4-208ENST00000477413 SCAF11Q99590 1463 aaKnown RBP34.67■■■■□ 3.14
CNIH4-208ENST00000477413 CPS1P31327 1500 aa34.66■■■■□ 3.14
CNIH4-208ENST00000477413 PPARGC1BQ86YN6 1023 aaKnown RBP34.66■■■■□ 3.14
CNIH4-208ENST00000477413 ADGRB3O60242 1522 aa34.64■■■■□ 3.14
CNIH4-208ENST00000477413 E9PCH4 1651 aa34.61■■■■□ 3.13
CNIH4-208ENST00000477413 TMEM2Q9UHN6 1383 aa34.59■■■■□ 3.13
CNIH4-208ENST00000477413 SLC52A1Q9NWF4 448 aa34.56■■■■□ 3.12
CNIH4-208ENST00000477413 IDI1Q13907 227 aa34.55■■■■□ 3.12
CNIH4-208ENST00000477413 LTKP29376 864 aa34.51■■■■□ 3.12
CNIH4-208ENST00000477413 STRCP1A6NGW2 1772 aa34.51■■■■□ 3.11
CNIH4-208ENST00000477413 ITGAEP38570 1179 aa34.49■■■■□ 3.11
CNIH4-208ENST00000477413 TMEM131LA2VDJ0 1609 aa34.48■■■■□ 3.11
CNIH4-208ENST00000477413 NAIPQ13075 1403 aa34.47■■■■□ 3.11
CNIH4-208ENST00000477413 NUP155O75694 1391 aa34.47■■■■□ 3.11
CNIH4-208ENST00000477413 TXNDC2Q86VQ3 553 aa34.45■■■■□ 3.11
CNIH4-208ENST00000477413 MYO5BQ9ULV0 1848 aa34.45■■■■□ 3.11
CNIH4-208ENST00000477413 EID1Q9Y6B2 187 aa34.44■■■■□ 3.1
CNIH4-208ENST00000477413 HFM1A2PYH4 1435 aa34.43■■■■□ 3.1
CNIH4-208ENST00000477413 ZFYVE9O95405 1425 aa34.43■■■■□ 3.1
CNIH4-208ENST00000477413 STAG3Q9UJ98 1225 aa34.41■■■■□ 3.1
CNIH4-208ENST00000477413 SPHKAPQ2M3C7 1700 aa34.39■■■■□ 3.1
CNIH4-208ENST00000477413 LRRC7Q96NW7 1537 aa34.37■■■■□ 3.09
CNIH4-208ENST00000477413 ALKQ9UM73 1620 aa34.32■■■■□ 3.08
CNIH4-208ENST00000477413 NWD1Q149M9 1564 aa34.31■■■■□ 3.08
CNIH4-208ENST00000477413 UBAP1LF5GYI3 381 aa34.3■■■■□ 3.08
CNIH4-208ENST00000477413 RIMS2Q9UQ26 1411 aa34.29■■■■□ 3.08
CNIH4-208ENST00000477413 PLEKHG1Q9ULL1 1385 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms