RNA–Protein interactions for RNA: ENST00000477393.1

RNF7-204, Transcript of ring finger protein 7, humanhuman

TSL 2

Gene RNF7, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-204ENST00000477393 CCDC141Q6ZP82 1450 aa24.28■■□□□ 1.48
RNF7-204ENST00000477393 KIF3BO15066 747 aa24.28■■□□□ 1.48
RNF7-204ENST00000477393 FAM135AQ9P2D6 1515 aa24.28■■□□□ 1.48
RNF7-204ENST00000477393 NCOA2Q15596 1464 aa24.26■■□□□ 1.47
RNF7-204ENST00000477393 FBXO31Q5XUX0 539 aaPredicted RBP24.25■■□□□ 1.47
RNF7-204ENST00000477393 TNRQ92752 1358 aa24.25■■□□□ 1.47
RNF7-204ENST00000477393 PZPP20742 1482 aa24.25■■□□□ 1.47
RNF7-204ENST00000477393 CAMSAP2Q08AD1 1489 aa24.24■■□□□ 1.47
RNF7-204ENST00000477393 KDM5DQ9BY66 1539 aa24.24■■□□□ 1.47
RNF7-204ENST00000477393 WASHC2CQ9Y4E1 1318 aa24.21■■□□□ 1.47
RNF7-204ENST00000477393 POLR1AO95602 1720 aaPredicted RBP24.2■■□□□ 1.46
RNF7-204ENST00000477393 ARHGEF5Q12774 1597 aa24.19■■□□□ 1.46
RNF7-204ENST00000477393 NEURL4Q96JN8 1562 aa24.19■■□□□ 1.46
RNF7-204ENST00000477393 MIA2Q96PC5 1412 aa24.18■■□□□ 1.46
RNF7-204ENST00000477393 TSPY4P0CV99 314 aa24.17■■□□□ 1.46
RNF7-204ENST00000477393 TSPY10P0CW01 314 aa24.17■■□□□ 1.46
RNF7-204ENST00000477393 THEMISQ8N1K5 641 aaPredicted RBP24.17■■□□□ 1.46
RNF7-204ENST00000477393 CPS1P31327 1500 aa24.16■■□□□ 1.46
RNF7-204ENST00000477393 NLRP1Q9C000 1473 aa24.16■■□□□ 1.46
RNF7-204ENST00000477393 ANKLE2Q86XL3 938 aa24.16■■□□□ 1.46
RNF7-204ENST00000477393 SHANK2Q9UPX8 1470 aa24.14■■□□□ 1.46
RNF7-204ENST00000477393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.13■■□□□ 1.45
RNF7-204ENST00000477393 MED14O60244 1454 aa24.12■■□□□ 1.45
RNF7-204ENST00000477393 TOM1O60784 492 aa24.11■■□□□ 1.45
RNF7-204ENST00000477393 UGGT1Q9NYU2 1555 aa24.11■■□□□ 1.45
RNF7-204ENST00000477393 DEPDC5O75140 1603 aa24.1■■□□□ 1.45
RNF7-204ENST00000477393 VWDEQ8N2E2 1590 aa24.08■■□□□ 1.45
RNF7-204ENST00000477393 MAST1Q9Y2H9 1570 aa24.08■■□□□ 1.45
RNF7-204ENST00000477393 LRRC9Q6ZRR7 1453 aa24.08■■□□□ 1.45
RNF7-204ENST00000477393 RNF17Q9BXT8 1623 aaKnown RBP24.08■■□□□ 1.45
RNF7-204ENST00000477393 HSPA1LP34931 641 aa24.06■■□□□ 1.44
RNF7-204ENST00000477393 NPHP4O75161 1426 aaPredicted RBP24.06■■□□□ 1.44
RNF7-204ENST00000477393 VPS8Q8N3P4 1428 aa24.05■■□□□ 1.44
RNF7-204ENST00000477393 ZC3H13Q5T200 1668 aaKnown RBP24.05■■□□□ 1.44
RNF7-204ENST00000477393 ABCC3O15438 1527 aa24.05■■□□□ 1.44
RNF7-204ENST00000477393 PIP4K2BP78356 416 aa24.04■■□□□ 1.44
RNF7-204ENST00000477393 EIF2AK4Q9P2K8 1649 aaKnown RBP24.03■■□□□ 1.44
RNF7-204ENST00000477393 SCAF1Q9H7N4 1312 aaKnown RBP24.02■■□□□ 1.44
RNF7-204ENST00000477393 MAP3K1Q13233 1512 aa24.01■■□□□ 1.43
RNF7-204ENST00000477393 IQGAP1P46940 1657 aa24■■□□□ 1.43
RNF7-204ENST00000477393 ERVK-7P63135 1459 aa23.99■■□□□ 1.43
RNF7-204ENST00000477393 MROH1Q8NDA8 1641 aa23.99■■□□□ 1.43
RNF7-204ENST00000477393 KANK4Q5T7N3 995 aaPredicted RBP23.98■■□□□ 1.43
RNF7-204ENST00000477393 ALKQ9UM73 1620 aa23.98■■□□□ 1.43
RNF7-204ENST00000477393 MYOM3Q5VTT5 1437 aa23.97■■□□□ 1.43
RNF7-204ENST00000477393 MED1Q15648 1581 aaPredicted RBP23.96■■□□□ 1.43
RNF7-204ENST00000477393 DUOX2Q9NRD8 1548 aa23.94■■□□□ 1.42
RNF7-204ENST00000477393 STRCP1A6NGW2 1772 aa23.93■■□□□ 1.42
RNF7-204ENST00000477393 LOC105371045A0A1W2PR82 267 aa23.92■■□□□ 1.42
RNF7-204ENST00000477393 LRRC7Q96NW7 1537 aa23.92■■□□□ 1.42
RNF7-204ENST00000477393 CEP152O94986 1710 aa23.92■■□□□ 1.42
RNF7-204ENST00000477393 UBR1Q8IWV7 1749 aa23.92■■□□□ 1.42
RNF7-204ENST00000477393 CFAP65Q6ZU64 1925 aaKnown RBP23.91■■□□□ 1.42
RNF7-204ENST00000477393 ARHGAP31Q2M1Z3 1444 aa23.91■■□□□ 1.42
RNF7-204ENST00000477393 SYNMO15061 1565 aa23.89■■□□□ 1.41
RNF7-204ENST00000477393 SCAF11Q99590 1463 aaKnown RBP23.87■■□□□ 1.41
RNF7-204ENST00000477393 ARHGAP23Q9P227 1491 aa23.87■■□□□ 1.41
RNF7-204ENST00000477393 SLIT1O75093 1534 aa23.87■■□□□ 1.41
RNF7-204ENST00000477393 PRDM15P57071 1507 aaPredicted RBP23.87■■□□□ 1.41
RNF7-204ENST00000477393 LTKP29376 864 aa23.86■■□□□ 1.41
RNF7-204ENST00000477393 KIF15Q9NS87 1388 aa23.86■■□□□ 1.41
RNF7-204ENST00000477393 ERBINQ96RT1 1412 aa23.85■■□□□ 1.41
RNF7-204ENST00000477393 ABCC5O15440 1437 aa23.84■■□□□ 1.41
RNF7-204ENST00000477393 TXNDC2Q86VQ3 553 aa23.84■■□□□ 1.41
RNF7-204ENST00000477393 CROCC2H7BZ55 1655 aa23.81■■□□□ 1.4
RNF7-204ENST00000477393 RRP7BPQ9NSQ0 103 aa23.81■■□□□ 1.4
RNF7-204ENST00000477393 EID1Q9Y6B2 187 aa23.8■■□□□ 1.4
RNF7-204ENST00000477393 PTPN23Q9H3S7 1636 aa23.79■■□□□ 1.4
RNF7-204ENST00000477393 PHF23Q9BUL5 403 aaPredicted RBP23.78■■□□□ 1.4
RNF7-204ENST00000477393 TMEM2Q9UHN6 1383 aa23.77■■□□□ 1.4
RNF7-204ENST00000477393 DAPK1P53355 1430 aa23.76■■□□□ 1.39
RNF7-204ENST00000477393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.76■■□□□ 1.392e-6■□□□□ 8.7
RNF7-204ENST00000477393 PIK3C2BO00750 1634 aa23.76■■□□□ 1.39
RNF7-204ENST00000477393 KANK1Q14678 1352 aa23.76■■□□□ 1.39
RNF7-204ENST00000477393 KDM5AP29375 1690 aaKnown RBP23.75■■□□□ 1.39
RNF7-204ENST00000477393 XIRP1Q702N8 1843 aaKnown RBP23.75■■□□□ 1.39
RNF7-204ENST00000477393 LMTK2Q8IWU2 1503 aa23.74■■□□□ 1.39
RNF7-204ENST00000477393 APLP2Q06481 763 aa23.72■■□□□ 1.39
RNF7-204ENST00000477393 IDI1Q13907 227 aa23.72■■□□□ 1.39
RNF7-204ENST00000477393 FGD6Q6ZV73 1430 aa23.72■■□□□ 1.39
RNF7-204ENST00000477393 STAG3Q9UJ98 1225 aa23.71■■□□□ 1.39
RNF7-204ENST00000477393 ANKRD30AQ9BXX3 1397 aa23.7■■□□□ 1.38
RNF7-204ENST00000477393 SENP3Q9H4L4 574 aaPredicted RBP23.7■■□□□ 1.38
RNF7-204ENST00000477393 EFCAB6Q5THR3 1501 aa23.69■■□□□ 1.38
RNF7-204ENST00000477393 FAM135BQ49AJ0 1406 aa23.68■■□□□ 1.38
RNF7-204ENST00000477393 TET3O43151 1660 aa23.67■■□□□ 1.38
RNF7-204ENST00000477393 NOS1P29475 1434 aa23.67■■□□□ 1.38
RNF7-204ENST00000477393 KCNA6P17658 529 aa23.66■■□□□ 1.38
RNF7-204ENST00000477393 CHIC2Q9UKJ5 165 aa23.66■■□□□ 1.38
RNF7-204ENST00000477393 TMEM94Q12767 1356 aa23.64■■□□□ 1.37
RNF7-204ENST00000477393 SLC52A1Q9NWF4 448 aa23.63■■□□□ 1.37
RNF7-204ENST00000477393 RGS17Q9UGC6 210 aaPredicted RBP23.63■■□□□ 1.37
RNF7-204ENST00000477393 SLC26A8Q96RN1 970 aa23.61■■□□□ 1.37
RNF7-204ENST00000477393 ADGRL2O95490 1459 aa23.61■■□□□ 1.37
RNF7-204ENST00000477393 ADGRB3O60242 1522 aa23.6■■□□□ 1.37
RNF7-204ENST00000477393 PROSER2Q86WR7 435 aaPredicted RBP23.59■■□□□ 1.37
RNF7-204ENST00000477393 NKTRP30414 1462 aaKnown RBP23.56■■□□□ 1.36
RNF7-204ENST00000477393 RPRD2Q5VT52 1461 aaKnown RBP23.56■■□□□ 1.36
RNF7-204ENST00000477393 NWD1Q149M9 1564 aa23.56■■□□□ 1.36
RNF7-204ENST00000477393 ROBO1Q9Y6N7 1651 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms