RNA–Protein interactions for RNA: ENST00000477375.5

IMP4-215, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-215ENST00000477375 NCOA1Q15788 1441 aa26.72■■□□□ 1.87
IMP4-215ENST00000477375 CNTLNQ9NXG0 1405 aa26.72■■□□□ 1.87
IMP4-215ENST00000477375 MROH1Q8NDA8 1641 aa26.72■■□□□ 1.87
IMP4-215ENST00000477375 RRBP1Q9P2E9 1410 aaKnown RBP26.7■■□□□ 1.86
IMP4-215ENST00000477375 ANKRD30AQ9BXX3 1397 aa26.7■■□□□ 1.86
IMP4-215ENST00000477375 ZMYM3Q14202 1370 aa26.68■■□□□ 1.86
IMP4-215ENST00000477375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.68■■□□□ 1.86
IMP4-215ENST00000477375 CEP152O94986 1710 aa26.68■■□□□ 1.86
IMP4-215ENST00000477375 PREX1Q8TCU6 1659 aa26.67■■□□□ 1.86
IMP4-215ENST00000477375 LMTK3Q96Q04 1460 aa26.67■■□□□ 1.86
IMP4-215ENST00000477375 ITGAEP38570 1179 aa26.66■■□□□ 1.86
IMP4-215ENST00000477375 CFAP65Q6ZU64 1925 aaKnown RBP26.65■■□□□ 1.86
IMP4-215ENST00000477375 PPP6R1Q9UPN7 881 aa26.65■■□□□ 1.86
IMP4-215ENST00000477375 KDM5DQ9BY66 1539 aa26.65■■□□□ 1.86
IMP4-215ENST00000477375 ERBINQ96RT1 1412 aa26.65■■□□□ 1.86
IMP4-215ENST00000477375 DEPDC5O75140 1603 aa26.63■■□□□ 1.85
IMP4-215ENST00000477375 ZC3H13Q5T200 1668 aaKnown RBP26.6■■□□□ 1.85
IMP4-215ENST00000477375 ABCC3O15438 1527 aa26.6■■□□□ 1.85
IMP4-215ENST00000477375 FAM135AQ9P2D6 1515 aa26.6■■□□□ 1.85
IMP4-215ENST00000477375 WASHC2CQ9Y4E1 1318 aa26.59■■□□□ 1.85
IMP4-215ENST00000477375 PRDM15P57071 1507 aaPredicted RBP26.58■■□□□ 1.85
IMP4-215ENST00000477375 ROCK1Q13464 1354 aa26.56■■□□□ 1.84
IMP4-215ENST00000477375 CAMSAP1Q5T5Y3 1602 aa26.55■■□□□ 1.84
IMP4-215ENST00000477375 HSPA2P54652 639 aa26.54■■□□□ 1.84
IMP4-215ENST00000477375 NPATQ14207 1427 aa26.54■■□□□ 1.84
IMP4-215ENST00000477375 ANKRD50Q9ULJ7 1429 aa26.54■■□□□ 1.84
IMP4-215ENST00000477375 FBXO31Q5XUX0 539 aaPredicted RBP26.53■■□□□ 1.84
IMP4-215ENST00000477375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.53■■□□□ 1.842e-7■■■□□ 17.7
IMP4-215ENST00000477375 MYO3AQ8NEV4 1616 aa26.51■■□□□ 1.83
IMP4-215ENST00000477375 PZPP20742 1482 aa26.51■■□□□ 1.83
IMP4-215ENST00000477375 VWDEQ8N2E2 1590 aa26.5■■□□□ 1.83
IMP4-215ENST00000477375 UHRF1BP1Q6BDS2 1440 aa26.5■■□□□ 1.83
IMP4-215ENST00000477375 UNC13BO14795 1591 aa26.46■■□□□ 1.83
IMP4-215ENST00000477375 ZNF142P52746 1687 aaPredicted RBP26.45■■□□□ 1.82
IMP4-215ENST00000477375 GCC2Q8IWJ2 1684 aa26.44■■□□□ 1.82
IMP4-215ENST00000477375 STRCQ7RTU9 1775 aa26.44■■□□□ 1.82
IMP4-215ENST00000477375 KANK1Q14678 1352 aa26.42■■□□□ 1.82
IMP4-215ENST00000477375 LMTK2Q8IWU2 1503 aa26.41■■□□□ 1.82
IMP4-215ENST00000477375 CEP170BQ9Y4F5 1589 aaPredicted RBP26.41■■□□□ 1.82
IMP4-215ENST00000477375 TNRQ92752 1358 aa26.4■■□□□ 1.82
IMP4-215ENST00000477375 SPATA31D1Q6ZQQ2 1576 aa26.4■■□□□ 1.82
IMP4-215ENST00000477375 ERVK-7P63135 1459 aa26.39■■□□□ 1.82
IMP4-215ENST00000477375 NAIPQ13075 1403 aa26.39■■□□□ 1.81
IMP4-215ENST00000477375 ARHGAP31Q2M1Z3 1444 aa26.38■■□□□ 1.81
IMP4-215ENST00000477375 TET3O43151 1660 aa26.36■■□□□ 1.81
IMP4-215ENST00000477375 EFCAB6Q5THR3 1501 aa26.35■■□□□ 1.81
IMP4-215ENST00000477375 IQGAP3Q86VI3 1631 aa26.35■■□□□ 1.81
IMP4-215ENST00000477375 A2ML1A8K2U0 1454 aa26.34■■□□□ 1.81
IMP4-215ENST00000477375 E9PCH4 1651 aa26.32■■□□□ 1.8
IMP4-215ENST00000477375 HFM1A2PYH4 1435 aa26.31■■□□□ 1.8
IMP4-215ENST00000477375 SYNMO15061 1565 aa26.29■■□□□ 1.8
IMP4-215ENST00000477375 NUP155O75694 1391 aa26.28■■□□□ 1.8
IMP4-215ENST00000477375 NLRP1Q9C000 1473 aa26.28■■□□□ 1.8
IMP4-215ENST00000477375 UBR1Q8IWV7 1749 aa26.26■■□□□ 1.79
IMP4-215ENST00000477375 PIK3C2BO00750 1634 aa26.24■■□□□ 1.79
IMP4-215ENST00000477375 UGGT1Q9NYU2 1555 aa26.24■■□□□ 1.79
IMP4-215ENST00000477375 NOS1P29475 1434 aa26.22■■□□□ 1.79
IMP4-215ENST00000477375 NCKAP5LQ9HCH0 1330 aa26.22■■□□□ 1.79
IMP4-215ENST00000477375 POLR1AO95602 1720 aaPredicted RBP26.22■■□□□ 1.79
IMP4-215ENST00000477375 MYO5BQ9ULV0 1848 aa26.21■■□□□ 1.79
IMP4-215ENST00000477375 PLA2R1Q13018 1463 aa26.2■■□□□ 1.78
IMP4-215ENST00000477375 RPRD2Q5VT52 1461 aaKnown RBP26.2■■□□□ 1.78
IMP4-215ENST00000477375 IDI1Q13907 227 aa26.16■■□□□ 1.78
IMP4-215ENST00000477375 SPHKAPQ2M3C7 1700 aa26.14■■□□□ 1.78
IMP4-215ENST00000477375 THEMISQ8N1K5 641 aaPredicted RBP26.14■■□□□ 1.78
IMP4-215ENST00000477375 NEURL4Q96JN8 1562 aa26.14■■□□□ 1.78
IMP4-215ENST00000477375 TRIM52Q96A61 297 aa26.13■■□□□ 1.77
IMP4-215ENST00000477375 PTPRTO14522 1441 aa26.13■■□□□ 1.77
IMP4-215ENST00000477375 KDM5AP29375 1690 aaKnown RBP26.12■■□□□ 1.77
IMP4-215ENST00000477375 PKD2Q13563 968 aa26.09■■□□□ 1.77
IMP4-215ENST00000477375 DMRT2Q9Y5R5 561 aa26.09■■□□□ 1.77
IMP4-215ENST00000477375 SETD5Q9C0A6 1442 aa26.08■■□□□ 1.77
IMP4-215ENST00000477375 ADGRB3O60242 1522 aa26.07■■□□□ 1.76
IMP4-215ENST00000477375 TMEM131LA2VDJ0 1609 aa26.06■■□□□ 1.76
IMP4-215ENST00000477375 ARHGAP23Q9P227 1491 aa26.05■■□□□ 1.76
IMP4-215ENST00000477375 SLIT1O75093 1534 aa26.05■■□□□ 1.76
IMP4-215ENST00000477375 ANKLE2Q86XL3 938 aa26.05■■□□□ 1.76
IMP4-215ENST00000477375 SLC52A1Q9NWF4 448 aa26.05■■□□□ 1.76
IMP4-215ENST00000477375 STAG3Q9UJ98 1225 aa26.03■■□□□ 1.76
IMP4-215ENST00000477375 LTKP29376 864 aa26.02■■□□□ 1.76
IMP4-215ENST00000477375 RAB3GAP2Q9H2M9 1393 aa26.02■■□□□ 1.76
IMP4-215ENST00000477375 IQGAP1P46940 1657 aa26.02■■□□□ 1.76
IMP4-215ENST00000477375 SLC4A1APQ9BWU0 796 aaKnown RBP26.01■■□□□ 1.75
IMP4-215ENST00000477375 CLTCL1P53675 1640 aa26■■□□□ 1.75
IMP4-215ENST00000477375 MED14O60244 1454 aa26■■□□□ 1.75
IMP4-215ENST00000477375 TMEM2Q9UHN6 1383 aa25.99■■□□□ 1.75
IMP4-215ENST00000477375 SCAF11Q99590 1463 aaKnown RBP25.98■■□□□ 1.75
IMP4-215ENST00000477375 NPHP4O75161 1426 aaPredicted RBP25.97■■□□□ 1.75
IMP4-215ENST00000477375 FOXD1Q16676 465 aa25.97■■□□□ 1.75
IMP4-215ENST00000477375 LTBP4Q8N2S1 1624 aa25.96■■□□□ 1.75
IMP4-215ENST00000477375 KIF1BO60333 1816 aa25.96■■□□□ 1.75
IMP4-215ENST00000477375 TXNDC2Q86VQ3 553 aa25.96■■□□□ 1.75
IMP4-215ENST00000477375 TRPM2O94759 1503 aa25.96■■□□□ 1.75
IMP4-215ENST00000477375 CHGAP10645 457 aaKnown RBP25.95■■□□□ 1.74
IMP4-215ENST00000477375 MPHOSPH9Q99550 1183 aa25.95■■□□□ 1.74
IMP4-215ENST00000477375 ZNF335Q9H4Z2 1342 aaPredicted RBP25.93■■□□□ 1.74
IMP4-215ENST00000477375 STRCP1A6NGW2 1772 aa25.92■■□□□ 1.74
IMP4-215ENST00000477375 ZFYVE9O95405 1425 aa25.9■■□□□ 1.74
IMP4-215ENST00000477375 EID1Q9Y6B2 187 aa25.9■■□□□ 1.74
IMP4-215ENST00000477375 RIMS2Q9UQ26 1411 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms