RNA–Protein interactions for RNA: ENST00000477160.1

GFRA4-203, Transcript of GDNF family receptor alpha 4, humanhuman

TSL 1 (best)

Gene GFRA4, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-203ENST00000477160 TCOF1Q13428 1488 aaKnown RBP38.34■■■■□ 3.73
GFRA4-203ENST00000477160 SHANK2Q9UPX8 1470 aa38.34■■■■□ 3.73
GFRA4-203ENST00000477160 ABCC5O15440 1437 aa38.32■■■■□ 3.73
GFRA4-203ENST00000477160 NCOA1Q15788 1441 aa38.3■■■■□ 3.72
GFRA4-203ENST00000477160 MYO3AQ8NEV4 1616 aa38.3■■■■□ 3.72
GFRA4-203ENST00000477160 PTPRTO14522 1441 aa38.29■■■■□ 3.72
GFRA4-203ENST00000477160 EIF2AK4Q9P2K8 1649 aaKnown RBP38.28■■■■□ 3.72
GFRA4-203ENST00000477160 PZPP20742 1482 aa38.28■■■■□ 3.72
GFRA4-203ENST00000477160 DUOX2Q9NRD8 1548 aa38.28■■■■□ 3.72
GFRA4-203ENST00000477160 DAPK1P53355 1430 aa38.27■■■■□ 3.72
GFRA4-203ENST00000477160 RNF17Q9BXT8 1623 aaKnown RBP38.27■■■■□ 3.72
GFRA4-203ENST00000477160 ZNF142P52746 1687 aaPredicted RBP38.26■■■■□ 3.71
GFRA4-203ENST00000477160 CAMSAP1Q5T5Y3 1602 aa38.25■■■■□ 3.71
GFRA4-203ENST00000477160 CEP170BQ9Y4F5 1589 aaPredicted RBP38.24■■■■□ 3.71
GFRA4-203ENST00000477160 CROCC2H7BZ55 1655 aa38.23■■■■□ 3.71
GFRA4-203ENST00000477160 DNMT1P26358 1616 aaKnown RBP38.23■■■■□ 3.71
GFRA4-203ENST00000477160 KIF15Q9NS87 1388 aa38.23■■■■□ 3.71
GFRA4-203ENST00000477160 FBXO31Q5XUX0 539 aaPredicted RBP38.21■■■■□ 3.71
GFRA4-203ENST00000477160 TNRQ92752 1358 aa38.2■■■■□ 3.71
GFRA4-203ENST00000477160 CERKQ8TCT0 537 aa38.2■■■■□ 3.71
GFRA4-203ENST00000477160 A2ML1A8K2U0 1454 aa38.19■■■■□ 3.7
GFRA4-203ENST00000477160 PLA2R1Q13018 1463 aa38.19■■■■□ 3.7
GFRA4-203ENST00000477160 RRP7BPQ9NSQ0 103 aa38.18■■■■□ 3.7
GFRA4-203ENST00000477160 ERBINQ96RT1 1412 aa38.17■■■■□ 3.7
GFRA4-203ENST00000477160 ABCC3O15438 1527 aa38.16■■■■□ 3.7
GFRA4-203ENST00000477160 ZC3H13Q5T200 1668 aaKnown RBP38.15■■■■□ 3.7
GFRA4-203ENST00000477160 PKD2Q13563 968 aa38.14■■■■□ 3.7
GFRA4-203ENST00000477160 ANKRD30AQ9BXX3 1397 aa38.13■■■■□ 3.69
GFRA4-203ENST00000477160 MROH1Q8NDA8 1641 aa38.12■■■■□ 3.69
GFRA4-203ENST00000477160 NCKAP5LQ9HCH0 1330 aa38.11■■■■□ 3.69
GFRA4-203ENST00000477160 CHIC2Q9UKJ5 165 aa38.08■■■■□ 3.69
GFRA4-203ENST00000477160 FAM50AQ14320 339 aaKnown RBP38.07■■■■□ 3.68
GFRA4-203ENST00000477160 NLRP1Q9C000 1473 aa38.06■■■■□ 3.68
GFRA4-203ENST00000477160 PRDM15P57071 1507 aaPredicted RBP38.04■■■■□ 3.68
GFRA4-203ENST00000477160 ADGRL2O95490 1459 aa38.01■■■■□ 3.67
GFRA4-203ENST00000477160 SPATA31D1Q6ZQQ2 1576 aa38■■■■□ 3.67
GFRA4-203ENST00000477160 ERVK-7P63135 1459 aa37.97■■■■□ 3.67
GFRA4-203ENST00000477160 THEMISQ8N1K5 641 aaPredicted RBP37.97■■■■□ 3.67
GFRA4-203ENST00000477160 CEP152O94986 1710 aa37.97■■■■□ 3.67
GFRA4-203ENST00000477160 KANK1Q14678 1352 aa37.96■■■■□ 3.67
GFRA4-203ENST00000477160 DEPDC5O75140 1603 aa37.96■■■■□ 3.67
GFRA4-203ENST00000477160 ARHGAP31Q2M1Z3 1444 aa37.95■■■■□ 3.67
GFRA4-203ENST00000477160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.95■■■■□ 3.67
GFRA4-203ENST00000477160 LTBP4Q8N2S1 1624 aa37.94■■■■□ 3.66
GFRA4-203ENST00000477160 UGGT1Q9NYU2 1555 aa37.93■■■■□ 3.66
GFRA4-203ENST00000477160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.89■■■■□ 3.66
GFRA4-203ENST00000477160 ANKLE2Q86XL3 938 aa37.88■■■■□ 3.65
GFRA4-203ENST00000477160 LMTK2Q8IWU2 1503 aa37.85■■■■□ 3.65
GFRA4-203ENST00000477160 ANKRD50Q9ULJ7 1429 aa37.84■■■■□ 3.65
GFRA4-203ENST00000477160 VWDEQ8N2E2 1590 aa37.84■■■■□ 3.65
GFRA4-203ENST00000477160 ZNF335Q9H4Z2 1342 aaPredicted RBP37.84■■■■□ 3.65
GFRA4-203ENST00000477160 IQSEC2Q5JU85 1478 aa37.83■■■■□ 3.65
GFRA4-203ENST00000477160 POLR1AO95602 1720 aaPredicted RBP37.81■■■■□ 3.64
GFRA4-203ENST00000477160 NEURL4Q96JN8 1562 aa37.8■■■■□ 3.64
GFRA4-203ENST00000477160 PPARGC1BQ86YN6 1023 aaKnown RBP37.77■■■■□ 3.64
GFRA4-203ENST00000477160 ROCK1Q13464 1354 aa37.76■■■■□ 3.64
GFRA4-203ENST00000477160 MED14O60244 1454 aa37.75■■■■□ 3.63
GFRA4-203ENST00000477160 CFAP65Q6ZU64 1925 aaKnown RBP37.74■■■■□ 3.63
GFRA4-203ENST00000477160 NPHP4O75161 1426 aaPredicted RBP37.72■■■■□ 3.63
GFRA4-203ENST00000477160 EFCAB6Q5THR3 1501 aa37.69■■■■□ 3.62
GFRA4-203ENST00000477160 UBR1Q8IWV7 1749 aa37.68■■■■□ 3.62
GFRA4-203ENST00000477160 NOS1P29475 1434 aa37.62■■■■□ 3.61
GFRA4-203ENST00000477160 ITGAEP38570 1179 aa37.62■■■■□ 3.61
GFRA4-203ENST00000477160 RPRD2Q5VT52 1461 aaKnown RBP37.61■■■■□ 3.61
GFRA4-203ENST00000477160 ARHGAP23Q9P227 1491 aa37.61■■■■□ 3.61
GFRA4-203ENST00000477160 SLIT1O75093 1534 aa37.61■■■■□ 3.61
GFRA4-203ENST00000477160 CPS1P31327 1500 aa37.6■■■■□ 3.61
GFRA4-203ENST00000477160 IQGAP1P46940 1657 aa37.6■■■■□ 3.61
GFRA4-203ENST00000477160 SCAF11Q99590 1463 aaKnown RBP37.59■■■■□ 3.61
GFRA4-203ENST00000477160 IDI1Q13907 227 aa37.59■■■■□ 3.61
GFRA4-203ENST00000477160 STAG3Q9UJ98 1225 aa37.59■■■■□ 3.61
GFRA4-203ENST00000477160 UNC13BO14795 1591 aa37.59■■■■□ 3.61
GFRA4-203ENST00000477160 PIK3C2BO00750 1634 aa37.58■■■■□ 3.61
GFRA4-203ENST00000477160 SYNMO15061 1565 aa37.56■■■■□ 3.6
GFRA4-203ENST00000477160 TXNDC2Q86VQ3 553 aa37.56■■■■□ 3.6
GFRA4-203ENST00000477160 SLC52A1Q9NWF4 448 aa37.56■■■■□ 3.6
GFRA4-203ENST00000477160 EID1Q9Y6B2 187 aa37.55■■■■□ 3.6
GFRA4-203ENST00000477160 RRBP1Q9P2E9 1410 aaKnown RBP37.54■■■■□ 3.6
GFRA4-203ENST00000477160 TET3O43151 1660 aa37.54■■■■□ 3.6
GFRA4-203ENST00000477160 KDM5AP29375 1690 aaKnown RBP37.54■■■■□ 3.6
GFRA4-203ENST00000477160 LTKP29376 864 aa37.54■■■■□ 3.6
GFRA4-203ENST00000477160 TMEM2Q9UHN6 1383 aa37.54■■■■□ 3.6
GFRA4-203ENST00000477160 UBAP1LF5GYI3 381 aa37.5■■■■□ 3.59
GFRA4-203ENST00000477160 GCC2Q8IWJ2 1684 aa37.46■■■■□ 3.59
GFRA4-203ENST00000477160 ADGRB3O60242 1522 aa37.44■■■■□ 3.58
GFRA4-203ENST00000477160 NUP155O75694 1391 aa37.43■■■■□ 3.58
GFRA4-203ENST00000477160 IQGAP3Q86VI3 1631 aa37.43■■■■□ 3.58
GFRA4-203ENST00000477160 E9PCH4 1651 aa37.34■■■■□ 3.57
GFRA4-203ENST00000477160 TOM1O60784 492 aa37.34■■■■□ 3.57
GFRA4-203ENST00000477160 LRRC7Q96NW7 1537 aa37.31■■■■□ 3.56
GFRA4-203ENST00000477160 STRCP1A6NGW2 1772 aa37.29■■■■□ 3.56
GFRA4-203ENST00000477160 HDGFP51858 240 aaKnown RBP37.28■■■■□ 3.56
GFRA4-203ENST00000477160 NAIPQ13075 1403 aa37.27■■■■□ 3.56
GFRA4-203ENST00000477160 TMEM131LA2VDJ0 1609 aa37.25■■■■□ 3.55
GFRA4-203ENST00000477160 ZFYVE9O95405 1425 aa37.25■■■■□ 3.55
GFRA4-203ENST00000477160 RIMS2Q9UQ26 1411 aa37.22■■■■□ 3.55
GFRA4-203ENST00000477160 CHGAP10645 457 aaKnown RBP37.21■■■■□ 3.55
GFRA4-203ENST00000477160 PIP4K2BP78356 416 aa37.2■■■■□ 3.55
GFRA4-203ENST00000477160 SLC26A8Q96RN1 970 aa37.2■■■■□ 3.55
GFRA4-203ENST00000477160 SCAF1Q9H7N4 1312 aaKnown RBP37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms