RNA–Protein interactions for RNA: ENST00000476317.2

SIPA1L3-202, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 3

Gene SIPA1L3, Length 608 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-202ENST00000476317 RSPH4AQ5TD94 716 aa29.8■■■□□ 2.36
SIPA1L3-202ENST00000476317 DNMT1P26358 1616 aaKnown RBP29.8■■■□□ 2.36
SIPA1L3-202ENST00000476317 MAST1Q9Y2H9 1570 aa29.78■■■□□ 2.36
SIPA1L3-202ENST00000476317 A2ML1A8K2U0 1454 aa29.78■■■□□ 2.36
SIPA1L3-202ENST00000476317 FAM135AQ9P2D6 1515 aa29.77■■■□□ 2.36
SIPA1L3-202ENST00000476317 PZPP20742 1482 aa29.77■■■□□ 2.36
SIPA1L3-202ENST00000476317 FBXO31Q5XUX0 539 aaPredicted RBP29.77■■■□□ 2.36
SIPA1L3-202ENST00000476317 MYOM3Q5VTT5 1437 aa29.75■■■□□ 2.35
SIPA1L3-202ENST00000476317 RNF17Q9BXT8 1623 aaKnown RBP29.74■■■□□ 2.35
SIPA1L3-202ENST00000476317 ZNF335Q9H4Z2 1342 aaPredicted RBP29.73■■■□□ 2.35
SIPA1L3-202ENST00000476317 TSPY4P0CV99 314 aa29.73■■■□□ 2.35
SIPA1L3-202ENST00000476317 TSPY10P0CW01 314 aa29.73■■■□□ 2.35
SIPA1L3-202ENST00000476317 TNRQ92752 1358 aa29.72■■■□□ 2.35
SIPA1L3-202ENST00000476317 WASHC2CQ9Y4E1 1318 aa29.71■■■□□ 2.35
SIPA1L3-202ENST00000476317 MIA2Q96PC5 1412 aa29.71■■■□□ 2.35
SIPA1L3-202ENST00000476317 PKD2Q13563 968 aa29.7■■■□□ 2.35
SIPA1L3-202ENST00000476317 IQSEC2Q5JU85 1478 aa29.69■■■□□ 2.34
SIPA1L3-202ENST00000476317 MROH1Q8NDA8 1641 aa29.68■■■□□ 2.34
SIPA1L3-202ENST00000476317 POLR1AO95602 1720 aaPredicted RBP29.68■■■□□ 2.34
SIPA1L3-202ENST00000476317 EIF2AK4Q9P2K8 1649 aaKnown RBP29.67■■■□□ 2.34
SIPA1L3-202ENST00000476317 NEURL4Q96JN8 1562 aa29.67■■■□□ 2.34
SIPA1L3-202ENST00000476317 ABCC3O15438 1527 aa29.66■■■□□ 2.34
SIPA1L3-202ENST00000476317 ZC3H13Q5T200 1668 aaKnown RBP29.64■■■□□ 2.34
SIPA1L3-202ENST00000476317 CROCC2H7BZ55 1655 aa29.63■■■□□ 2.33
SIPA1L3-202ENST00000476317 CEP152O94986 1710 aa29.61■■■□□ 2.33
SIPA1L3-202ENST00000476317 PTPN23Q9H3S7 1636 aa29.6■■■□□ 2.33
SIPA1L3-202ENST00000476317 NLRP1Q9C000 1473 aa29.58■■■□□ 2.33
SIPA1L3-202ENST00000476317 SPATA31D1Q6ZQQ2 1576 aa29.57■■■□□ 2.32
SIPA1L3-202ENST00000476317 UGGT1Q9NYU2 1555 aa29.57■■■□□ 2.32
SIPA1L3-202ENST00000476317 DUOX2Q9NRD8 1548 aa29.57■■■□□ 2.32
SIPA1L3-202ENST00000476317 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.57■■■□□ 2.32
SIPA1L3-202ENST00000476317 ABCC5O15440 1437 aa29.56■■■□□ 2.32
SIPA1L3-202ENST00000476317 ERVK-7P63135 1459 aa29.54■■■□□ 2.32
SIPA1L3-202ENST00000476317 SHANK2Q9UPX8 1470 aa29.54■■■□□ 2.32
SIPA1L3-202ENST00000476317 KIF15Q9NS87 1388 aa29.51■■■□□ 2.31
SIPA1L3-202ENST00000476317 PRDM15P57071 1507 aaPredicted RBP29.5■■■□□ 2.31
SIPA1L3-202ENST00000476317 DAPK1P53355 1430 aa29.5■■■□□ 2.31
SIPA1L3-202ENST00000476317 FGD6Q6ZV73 1430 aa29.5■■■□□ 2.31
SIPA1L3-202ENST00000476317 DEPDC5O75140 1603 aa29.49■■■□□ 2.31
SIPA1L3-202ENST00000476317 VWDEQ8N2E2 1590 aa29.47■■■□□ 2.31
SIPA1L3-202ENST00000476317 CFAP65Q6ZU64 1925 aaKnown RBP29.46■■■□□ 2.31
SIPA1L3-202ENST00000476317 UBAP1LF5GYI3 381 aa29.46■■■□□ 2.31
SIPA1L3-202ENST00000476317 APLP2Q06481 763 aa29.46■■■□□ 2.31
SIPA1L3-202ENST00000476317 THEMISQ8N1K5 641 aaPredicted RBP29.46■■■□□ 2.31
SIPA1L3-202ENST00000476317 RRP7BPQ9NSQ0 103 aa29.46■■■□□ 2.31
SIPA1L3-202ENST00000476317 ERBINQ96RT1 1412 aa29.45■■■□□ 2.31
SIPA1L3-202ENST00000476317 MED14O60244 1454 aa29.45■■■□□ 2.31
SIPA1L3-202ENST00000476317 DISP3Q9P2K9 1392 aa29.45■■■□□ 2.31
SIPA1L3-202ENST00000476317 ANKLE2Q86XL3 938 aa29.45■■■□□ 2.31
SIPA1L3-202ENST00000476317 NPHP4O75161 1426 aaPredicted RBP29.44■■■□□ 2.3
SIPA1L3-202ENST00000476317 IQGAP1P46940 1657 aa29.44■■■□□ 2.3
SIPA1L3-202ENST00000476317 UBR1Q8IWV7 1749 aa29.43■■■□□ 2.3
SIPA1L3-202ENST00000476317 CPS1P31327 1500 aa29.41■■■□□ 2.3
SIPA1L3-202ENST00000476317 STRCP1A6NGW2 1772 aa29.37■■■□□ 2.29
SIPA1L3-202ENST00000476317 ILDR2Q71H61 639 aa29.37■■■□□ 2.29
SIPA1L3-202ENST00000476317 ARHGAP31Q2M1Z3 1444 aa29.37■■■□□ 2.29
SIPA1L3-202ENST00000476317 CHIC2Q9UKJ5 165 aa29.36■■■□□ 2.29
SIPA1L3-202ENST00000476317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.34■■■□□ 2.29
SIPA1L3-202ENST00000476317 PIK3C2BO00750 1634 aa29.31■■■□□ 2.28
SIPA1L3-202ENST00000476317 ALKQ9UM73 1620 aa29.31■■■□□ 2.28
SIPA1L3-202ENST00000476317 ANKRD30AQ9BXX3 1397 aa29.3■■■□□ 2.28
SIPA1L3-202ENST00000476317 ARHGAP23Q9P227 1491 aa29.29■■■□□ 2.28
SIPA1L3-202ENST00000476317 SLIT1O75093 1534 aa29.28■■■□□ 2.28
SIPA1L3-202ENST00000476317 LMTK2Q8IWU2 1503 aa29.28■■■□□ 2.28
SIPA1L3-202ENST00000476317 SCAF11Q99590 1463 aaKnown RBP29.28■■■□□ 2.28
SIPA1L3-202ENST00000476317 ADGRL2O95490 1459 aa29.27■■■□□ 2.28
SIPA1L3-202ENST00000476317 LTKP29376 864 aa29.25■■■□□ 2.27
SIPA1L3-202ENST00000476317 PIP4K2BP78356 416 aa29.25■■■□□ 2.27
SIPA1L3-202ENST00000476317 SCAF1Q9H7N4 1312 aaKnown RBP29.24■■■□□ 2.27
SIPA1L3-202ENST00000476317 SYNMO15061 1565 aa29.24■■■□□ 2.27
SIPA1L3-202ENST00000476317 KANK1Q14678 1352 aa29.24■■■□□ 2.27
SIPA1L3-202ENST00000476317 LRRC7Q96NW7 1537 aa29.23■■■□□ 2.27
SIPA1L3-202ENST00000476317 EFCAB6Q5THR3 1501 aa29.22■■■□□ 2.27
SIPA1L3-202ENST00000476317 FAM50AQ14320 339 aaKnown RBP29.21■■■□□ 2.27
SIPA1L3-202ENST00000476317 HSPA1LP34931 641 aa29.2■■■□□ 2.26
SIPA1L3-202ENST00000476317 TOM1O60784 492 aa29.18■■■□□ 2.26
SIPA1L3-202ENST00000476317 TXNDC2Q86VQ3 553 aa29.17■■■□□ 2.26
SIPA1L3-202ENST00000476317 KDM5AP29375 1690 aaKnown RBP29.16■■■□□ 2.26
SIPA1L3-202ENST00000476317 TMEM2Q9UHN6 1383 aa29.15■■■□□ 2.26
SIPA1L3-202ENST00000476317 NOS1P29475 1434 aa29.15■■■□□ 2.26
SIPA1L3-202ENST00000476317 IDI1Q13907 227 aa29.14■■■□□ 2.26
SIPA1L3-202ENST00000476317 ANKRD50Q9ULJ7 1429 aa29.13■■■□□ 2.25
SIPA1L3-202ENST00000476317 XIRP1Q702N8 1843 aaKnown RBP29.13■■■□□ 2.25
SIPA1L3-202ENST00000476317 ADGRB3O60242 1522 aa29.1■■■□□ 2.25
SIPA1L3-202ENST00000476317 MED1Q15648 1581 aaPredicted RBP29.09■■■□□ 2.25
SIPA1L3-202ENST00000476317 SOCS7O14512 581 aa29.08■■■□□ 2.25
SIPA1L3-202ENST00000476317 STAG3Q9UJ98 1225 aa29.08■■■□□ 2.25
SIPA1L3-202ENST00000476317 EID1Q9Y6B2 187 aa29.08■■■□□ 2.25
SIPA1L3-202ENST00000476317 TET3O43151 1660 aa29.06■■■□□ 2.24
SIPA1L3-202ENST00000476317 UNC13BO14795 1591 aa29.05■■■□□ 2.24
SIPA1L3-202ENST00000476317 MYO5BQ9ULV0 1848 aa29.03■■■□□ 2.24
SIPA1L3-202ENST00000476317 RPRD2Q5VT52 1461 aaKnown RBP29.03■■■□□ 2.24
SIPA1L3-202ENST00000476317 GCC2Q8IWJ2 1684 aa29.02■■■□□ 2.24
SIPA1L3-202ENST00000476317 SENP3Q9H4L4 574 aaPredicted RBP29.01■■■□□ 2.23
SIPA1L3-202ENST00000476317 E9PCH4 1651 aa28.98■■■□□ 2.23
SIPA1L3-202ENST00000476317 SLC26A8Q96RN1 970 aa28.97■■■□□ 2.23
SIPA1L3-202ENST00000476317 SLC52A1Q9NWF4 448 aa28.96■■■□□ 2.23
SIPA1L3-202ENST00000476317 TMEM131LA2VDJ0 1609 aa28.95■■■□□ 2.23
SIPA1L3-202ENST00000476317 PPARGC1BQ86YN6 1023 aaKnown RBP28.95■■■□□ 2.22
SIPA1L3-202ENST00000476317 ZFYVE9O95405 1425 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms