RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 UBAP1LF5GYI3 381 aa17.89■□□□□ 0.45
NUDCD3-206ENST00000475952 KANK4Q5T7N3 995 aaPredicted RBP17.89■□□□□ 0.45
NUDCD3-206ENST00000475952 MIA2Q96PC5 1412 aa17.89■□□□□ 0.45
NUDCD3-206ENST00000475952 TCOF1Q13428 1488 aaKnown RBP17.88■□□□□ 0.45
NUDCD3-206ENST00000475952 MAST1Q9Y2H9 1570 aa17.88■□□□□ 0.45
NUDCD3-206ENST00000475952 ZMYM3Q14202 1370 aa17.88■□□□□ 0.45
NUDCD3-206ENST00000475952 MED1Q15648 1581 aaPredicted RBP17.87■□□□□ 0.45
NUDCD3-206ENST00000475952 PTPN23Q9H3S7 1636 aa17.87■□□□□ 0.45
NUDCD3-206ENST00000475952 RSPH4AQ5TD94 716 aa17.87■□□□□ 0.45
NUDCD3-206ENST00000475952 POLR1AO95602 1720 aaPredicted RBP17.85■□□□□ 0.45
NUDCD3-206ENST00000475952 PTPRKQ15262 1439 aa17.83■□□□□ 0.45
NUDCD3-206ENST00000475952 PKD2Q13563 968 aa17.82■□□□□ 0.44
NUDCD3-206ENST00000475952 EIF2AK4Q9P2K8 1649 aaKnown RBP17.82■□□□□ 0.44
NUDCD3-206ENST00000475952 DNMT1P26358 1616 aaKnown RBP17.81■□□□□ 0.44
NUDCD3-206ENST00000475952 FAM135AQ9P2D6 1515 aa17.81■□□□□ 0.44
NUDCD3-206ENST00000475952 DHX29Q7Z478 1369 aaKnown RBP17.79■□□□□ 0.44
NUDCD3-206ENST00000475952 TSPY4P0CV99 314 aa17.79■□□□□ 0.44
NUDCD3-206ENST00000475952 TSPY10P0CW01 314 aa17.79■□□□□ 0.44
NUDCD3-206ENST00000475952 ZC3H13Q5T200 1668 aaKnown RBP17.79■□□□□ 0.44
NUDCD3-206ENST00000475952 RNF17Q9BXT8 1623 aaKnown RBP17.79■□□□□ 0.44
NUDCD3-206ENST00000475952 NEURL4Q96JN8 1562 aa17.79■□□□□ 0.44
NUDCD3-206ENST00000475952 SHANK2Q9UPX8 1470 aa17.77■□□□□ 0.44
NUDCD3-206ENST00000475952 FGD6Q6ZV73 1430 aa17.77■□□□□ 0.44
NUDCD3-206ENST00000475952 KDM5DQ9BY66 1539 aa17.77■□□□□ 0.43
NUDCD3-206ENST00000475952 A2ML1A8K2U0 1454 aa17.76■□□□□ 0.43
NUDCD3-206ENST00000475952 GGT6Q6P531 493 aa17.76■□□□□ 0.43
NUDCD3-206ENST00000475952 PPP6R1Q9UPN7 881 aa17.76■□□□□ 0.43
NUDCD3-206ENST00000475952 HSPA1LP34931 641 aa17.75■□□□□ 0.43
NUDCD3-206ENST00000475952 CPS1P31327 1500 aa17.75■□□□□ 0.43
NUDCD3-206ENST00000475952 DUOX2Q9NRD8 1548 aa17.73■□□□□ 0.43
NUDCD3-206ENST00000475952 ALKQ9UM73 1620 aa17.73■□□□□ 0.43
NUDCD3-206ENST00000475952 CEP152O94986 1710 aa17.73■□□□□ 0.43
NUDCD3-206ENST00000475952 DAPK1P53355 1430 aa17.72■□□□□ 0.43
NUDCD3-206ENST00000475952 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.42
NUDCD3-206ENST00000475952 CFAP65Q6ZU64 1925 aaKnown RBP17.7■□□□□ 0.42
NUDCD3-206ENST00000475952 VWDEQ8N2E2 1590 aa17.7■□□□□ 0.42
NUDCD3-206ENST00000475952 KIF3BO15066 747 aa17.7■□□□□ 0.42
NUDCD3-206ENST00000475952 PIP4K2BP78356 416 aa17.7■□□□□ 0.42
NUDCD3-206ENST00000475952 ABCC5O15440 1437 aa17.69■□□□□ 0.42
NUDCD3-206ENST00000475952 MROH1Q8NDA8 1641 aa17.69■□□□□ 0.42
NUDCD3-206ENST00000475952 DEPDC5O75140 1603 aa17.68■□□□□ 0.42
NUDCD3-206ENST00000475952 STRCP1A6NGW2 1772 aa17.66■□□□□ 0.42
NUDCD3-206ENST00000475952 ERBINQ96RT1 1412 aa17.66■□□□□ 0.42
NUDCD3-206ENST00000475952 TOM1O60784 492 aa17.66■□□□□ 0.42
NUDCD3-206ENST00000475952 PZPP20742 1482 aa17.66■□□□□ 0.42
NUDCD3-206ENST00000475952 PRDM15P57071 1507 aaPredicted RBP17.66■□□□□ 0.42
NUDCD3-206ENST00000475952 ABCC3O15438 1527 aa17.65■□□□□ 0.42
NUDCD3-206ENST00000475952 KIF15Q9NS87 1388 aa17.65■□□□□ 0.42
NUDCD3-206ENST00000475952 IQGAP1P46940 1657 aa17.63■□□□□ 0.41
NUDCD3-206ENST00000475952 WASHC2CQ9Y4E1 1318 aa17.63■□□□□ 0.41
NUDCD3-206ENST00000475952 TNRQ92752 1358 aa17.63■□□□□ 0.41
NUDCD3-206ENST00000475952 ANKRD30AQ9BXX3 1397 aa17.61■□□□□ 0.41
NUDCD3-206ENST00000475952 ADGRL2O95490 1459 aa17.61■□□□□ 0.41
NUDCD3-206ENST00000475952 PHF23Q9BUL5 403 aaPredicted RBP17.6■□□□□ 0.41
NUDCD3-206ENST00000475952 MED14O60244 1454 aa17.6■□□□□ 0.41
NUDCD3-206ENST00000475952 SYNMO15061 1565 aa17.6■□□□□ 0.41
NUDCD3-206ENST00000475952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.58■□□□□ 0.4
NUDCD3-206ENST00000475952 FAM50AQ14320 339 aaKnown RBP17.58■□□□□ 0.4
NUDCD3-206ENST00000475952 FBXO31Q5XUX0 539 aaPredicted RBP17.58■□□□□ 0.4
NUDCD3-206ENST00000475952 UGGT1Q9NYU2 1555 aa17.57■□□□□ 0.4
NUDCD3-206ENST00000475952 NPHP4O75161 1426 aaPredicted RBP17.57■□□□□ 0.4
NUDCD3-206ENST00000475952 NLRP1Q9C000 1473 aa17.56■□□□□ 0.4
NUDCD3-206ENST00000475952 RRP7BPQ9NSQ0 103 aa17.56■□□□□ 0.4
NUDCD3-206ENST00000475952 LRRC7Q96NW7 1537 aa17.55■□□□□ 0.4
NUDCD3-206ENST00000475952 ANKLE2Q86XL3 938 aa17.54■□□□□ 0.4
NUDCD3-206ENST00000475952 CHIC2Q9UKJ5 165 aa17.54■□□□□ 0.4
NUDCD3-206ENST00000475952 XIRP1Q702N8 1843 aaKnown RBP17.54■□□□□ 0.4
NUDCD3-206ENST00000475952 ERVK-7P63135 1459 aa17.53■□□□□ 0.4
NUDCD3-206ENST00000475952 KANK1Q14678 1352 aa17.53■□□□□ 0.4
NUDCD3-206ENST00000475952 UBR1Q8IWV7 1749 aa17.52■□□□□ 0.4
NUDCD3-206ENST00000475952 GCC2Q8IWJ2 1684 aa17.52■□□□□ 0.39
NUDCD3-206ENST00000475952 UNC13BO14795 1591 aa17.5■□□□□ 0.39
NUDCD3-206ENST00000475952 THEMISQ8N1K5 641 aaPredicted RBP17.5■□□□□ 0.39
NUDCD3-206ENST00000475952 LMTK2Q8IWU2 1503 aa17.5■□□□□ 0.39
NUDCD3-206ENST00000475952 ARHGAP31Q2M1Z3 1444 aa17.49■□□□□ 0.39
NUDCD3-206ENST00000475952 EFCAB6Q5THR3 1501 aa17.49■□□□□ 0.39
NUDCD3-206ENST00000475952 SENP3Q9H4L4 574 aaPredicted RBP17.49■□□□□ 0.39
NUDCD3-206ENST00000475952 TET3O43151 1660 aa17.48■□□□□ 0.39
NUDCD3-206ENST00000475952 ANKRD50Q9ULJ7 1429 aa17.48■□□□□ 0.39
NUDCD3-206ENST00000475952 RGS17Q9UGC6 210 aaPredicted RBP17.47■□□□□ 0.39
NUDCD3-206ENST00000475952 KDM5AP29375 1690 aaKnown RBP17.47■□□□□ 0.39
NUDCD3-206ENST00000475952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.46■□□□□ 0.391e-6■□□□□ 9.5
NUDCD3-206ENST00000475952 PIK3C2BO00750 1634 aa17.46■□□□□ 0.39
NUDCD3-206ENST00000475952 ROCK1Q13464 1354 aa17.45■□□□□ 0.38
NUDCD3-206ENST00000475952 PPARGC1BQ86YN6 1023 aaKnown RBP17.45■□□□□ 0.38
NUDCD3-206ENST00000475952 IQGAP3Q86VI3 1631 aa17.43■□□□□ 0.38
NUDCD3-206ENST00000475952 RRBP1Q9P2E9 1410 aaKnown RBP17.42■□□□□ 0.38
NUDCD3-206ENST00000475952 MYO5BQ9ULV0 1848 aa17.42■□□□□ 0.38
NUDCD3-206ENST00000475952 E9PCH4 1651 aa17.4■□□□□ 0.38
NUDCD3-206ENST00000475952 RPRD2Q5VT52 1461 aaKnown RBP17.4■□□□□ 0.38
NUDCD3-206ENST00000475952 SETD1AO15047 1707 aaKnown RBP17.4■□□□□ 0.38
NUDCD3-206ENST00000475952 SCAF11Q99590 1463 aaKnown RBP17.39■□□□□ 0.37
NUDCD3-206ENST00000475952 ITGAEP38570 1179 aa17.38■□□□□ 0.37
NUDCD3-206ENST00000475952 SLIT1O75093 1534 aa17.37■□□□□ 0.37
NUDCD3-206ENST00000475952 ARHGAP23Q9P227 1491 aa17.37■□□□□ 0.37
NUDCD3-206ENST00000475952 ADGRB3O60242 1522 aa17.36■□□□□ 0.37
NUDCD3-206ENST00000475952 ROBO1Q9Y6N7 1651 aa17.36■□□□□ 0.37
NUDCD3-206ENST00000475952 NOS1P29475 1434 aa17.35■□□□□ 0.37
NUDCD3-206ENST00000475952 SPHKAPQ2M3C7 1700 aa17.34■□□□□ 0.37
NUDCD3-206ENST00000475952 POTEAQ6S8J7 498 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms