RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 THEMISQ8N1K5 641 aaPredicted RBP23.97■■□□□ 1.43
CSNK2B-207ENST00000475875 ADGBQ8N7X0 1667 aa23.97■■□□□ 1.43
CSNK2B-207ENST00000475875 FAM135AQ9P2D6 1515 aa23.97■■□□□ 1.43
CSNK2B-207ENST00000475875 DEPDC5O75140 1603 aa23.96■■□□□ 1.43
CSNK2B-207ENST00000475875 NPHP4O75161 1426 aaPredicted RBP23.96■■□□□ 1.43
CSNK2B-207ENST00000475875 RGS17Q9UGC6 210 aaPredicted RBP23.95■■□□□ 1.42
CSNK2B-207ENST00000475875 PZPP20742 1482 aa23.94■■□□□ 1.42
CSNK2B-207ENST00000475875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.93■■□□□ 1.42
CSNK2B-207ENST00000475875 CFDP1Q9UEE9 299 aaPredicted RBP23.93■■□□□ 1.42
CSNK2B-207ENST00000475875 NLRP1Q9C000 1473 aa23.93■■□□□ 1.42
CSNK2B-207ENST00000475875 RNF17Q9BXT8 1623 aaKnown RBP23.92■■□□□ 1.42
CSNK2B-207ENST00000475875 LRRC7Q96NW7 1537 aa23.91■■□□□ 1.42
CSNK2B-207ENST00000475875 SYNMO15061 1565 aa23.91■■□□□ 1.42
CSNK2B-207ENST00000475875 FBXO31Q5XUX0 539 aaPredicted RBP23.89■■□□□ 1.41
CSNK2B-207ENST00000475875 RTEL1-TNFRSF6BF6WH68 1400 aa23.89■■□□□ 1.41
CSNK2B-207ENST00000475875 DHX29Q7Z478 1369 aaKnown RBP23.89■■□□□ 1.41
CSNK2B-207ENST00000475875 FYCO1Q9BQS8 1478 aa23.88■■□□□ 1.41
CSNK2B-207ENST00000475875 MIA2Q96PC5 1412 aa23.88■■□□□ 1.41
CSNK2B-207ENST00000475875 KDM5DQ9BY66 1539 aa23.88■■□□□ 1.41
CSNK2B-207ENST00000475875 UGGT1Q9NYU2 1555 aa23.87■■□□□ 1.41
CSNK2B-207ENST00000475875 IQGAP1P46940 1657 aa23.86■■□□□ 1.41
CSNK2B-207ENST00000475875 CCNB3Q8WWL7 1395 aa23.85■■□□□ 1.41
CSNK2B-207ENST00000475875 EHMT2Q96KQ7 1210 aa23.83■■□□□ 1.41
CSNK2B-207ENST00000475875 SENP3Q9H4L4 574 aaPredicted RBP23.81■■□□□ 1.4
CSNK2B-207ENST00000475875 WASHC2CQ9Y4E1 1318 aa23.81■■□□□ 1.4
CSNK2B-207ENST00000475875 MBD5Q9P267 1494 aa23.81■■□□□ 1.4
CSNK2B-207ENST00000475875 STRCP1A6NGW2 1772 aa23.8■■□□□ 1.4
CSNK2B-207ENST00000475875 KIF3BO15066 747 aa23.79■■□□□ 1.4
CSNK2B-207ENST00000475875 POTEAQ6S8J7 498 aa23.77■■□□□ 1.4
CSNK2B-207ENST00000475875 FAM135BQ49AJ0 1406 aa23.76■■□□□ 1.39
CSNK2B-207ENST00000475875 ZNF644Q9H582 1327 aaPredicted RBP23.71■■□□□ 1.39
CSNK2B-207ENST00000475875 ZC3H13Q5T200 1668 aaKnown RBP23.7■■□□□ 1.38
CSNK2B-207ENST00000475875 MTUS2Q5JR59 1369 aa23.69■■□□□ 1.38
CSNK2B-207ENST00000475875 RSPH4AQ5TD94 716 aa23.67■■□□□ 1.38
CSNK2B-207ENST00000475875 CCDC141Q6ZP82 1450 aa23.67■■□□□ 1.38
CSNK2B-207ENST00000475875 TIAM1Q13009 1591 aa23.66■■□□□ 1.38
CSNK2B-207ENST00000475875 SCAF11Q99590 1463 aaKnown RBP23.66■■□□□ 1.38
CSNK2B-207ENST00000475875 ERVK-7P63135 1459 aa23.62■■□□□ 1.37
CSNK2B-207ENST00000475875 ARHGAP23Q9P227 1491 aa23.6■■□□□ 1.37
CSNK2B-207ENST00000475875 SLIT1O75093 1534 aa23.59■■□□□ 1.37
CSNK2B-207ENST00000475875 XIRP1Q702N8 1843 aaKnown RBP23.59■■□□□ 1.37
CSNK2B-207ENST00000475875 ABCC3O15438 1527 aa23.59■■□□□ 1.37
CSNK2B-207ENST00000475875 CEP162Q5TB80 1403 aa23.59■■□□□ 1.37
CSNK2B-207ENST00000475875 UBR1Q8IWV7 1749 aa23.57■■□□□ 1.36
CSNK2B-207ENST00000475875 EHBP1L1Q8N3D4 1523 aa23.57■■□□□ 1.36
CSNK2B-207ENST00000475875 LRRC9Q6ZRR7 1453 aa23.56■■□□□ 1.36
CSNK2B-207ENST00000475875 TXNDC2Q86VQ3 553 aa23.56■■□□□ 1.36
CSNK2B-207ENST00000475875 NCOA2Q15596 1464 aa23.56■■□□□ 1.36
CSNK2B-207ENST00000475875 LTKP29376 864 aa23.55■■□□□ 1.36
CSNK2B-207ENST00000475875 SETD1AO15047 1707 aaKnown RBP23.55■■□□□ 1.36
CSNK2B-207ENST00000475875 EID1Q9Y6B2 187 aa23.53■■□□□ 1.36
CSNK2B-207ENST00000475875 ROBO1Q9Y6N7 1651 aa23.53■■□□□ 1.36
CSNK2B-207ENST00000475875 TMEM94Q12767 1356 aa23.52■■□□□ 1.36
CSNK2B-207ENST00000475875 CAMSAP2Q08AD1 1489 aa23.51■■□□□ 1.35
CSNK2B-207ENST00000475875 TSPY4P0CV99 314 aa23.51■■□□□ 1.35
CSNK2B-207ENST00000475875 TSPY10P0CW01 314 aa23.51■■□□□ 1.35
CSNK2B-207ENST00000475875 UPF1Q92900 1129 aaKnown RBP eCLIP23.51■■□□□ 1.35
CSNK2B-207ENST00000475875 JCADQ9P266 1359 aa23.51■■□□□ 1.35
CSNK2B-207ENST00000475875 ARHGEF5Q12774 1597 aa23.5■■□□□ 1.35
CSNK2B-207ENST00000475875 KCNA6P17658 529 aa23.47■■□□□ 1.35
CSNK2B-207ENST00000475875 MAP3K1Q13233 1512 aa23.47■■□□□ 1.35
CSNK2B-207ENST00000475875 EIF2AK4Q9P2K8 1649 aaKnown RBP23.47■■□□□ 1.35
CSNK2B-207ENST00000475875 ARHGAP31Q2M1Z3 1444 aa23.44■■□□□ 1.34
CSNK2B-207ENST00000475875 TMEM2Q9UHN6 1383 aa23.44■■□□□ 1.34
CSNK2B-207ENST00000475875 ZNF772Q68DY9 489 aaPredicted RBP23.43■■□□□ 1.34
CSNK2B-207ENST00000475875 MROH1Q8NDA8 1641 aa23.42■■□□□ 1.34
CSNK2B-207ENST00000475875 PROSER2Q86WR7 435 aaPredicted RBP23.42■■□□□ 1.34
CSNK2B-207ENST00000475875 PRDM15P57071 1507 aaPredicted RBP23.42■■□□□ 1.34
CSNK2B-207ENST00000475875 NKTRP30414 1462 aaKnown RBP23.42■■□□□ 1.34
CSNK2B-207ENST00000475875 SRCAPQ6ZRS2 3230 aa23.41■■□□□ 1.34
CSNK2B-207ENST00000475875 MAST1Q9Y2H9 1570 aa23.41■■□□□ 1.34
CSNK2B-207ENST00000475875 SPATA31A6Q5VVP1 1343 aa23.4■■□□□ 1.34
CSNK2B-207ENST00000475875 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
CSNK2B-207ENST00000475875 MSH6P52701 1360 aa23.4■■□□□ 1.34
CSNK2B-207ENST00000475875 FGD6Q6ZV73 1430 aa23.39■■□□□ 1.33
CSNK2B-207ENST00000475875 PHLPP1O60346 1717 aa23.39■■□□□ 1.33
CSNK2B-207ENST00000475875 SLAIN2Q9P270 581 aa23.38■■□□□ 1.33
CSNK2B-207ENST00000475875 CEP152O94986 1710 aa23.36■■□□□ 1.33
CSNK2B-207ENST00000475875 NWD1Q149M9 1564 aa23.35■■□□□ 1.33
CSNK2B-207ENST00000475875 TET3O43151 1660 aa23.35■■□□□ 1.33
CSNK2B-207ENST00000475875 KDM5AP29375 1690 aaKnown RBP23.35■■□□□ 1.33
CSNK2B-207ENST00000475875 CDK12Q9NYV4 1490 aaPredicted RBP23.34■■□□□ 1.33
CSNK2B-207ENST00000475875 COL16A1Q07092 1604 aaPredicted RBP23.33■■□□□ 1.33
CSNK2B-207ENST00000475875 TRIM52Q96A61 297 aa23.33■■□□□ 1.33
CSNK2B-207ENST00000475875 STAG3Q9UJ98 1225 aa23.33■■□□□ 1.33
CSNK2B-207ENST00000475875 PIK3C2BO00750 1634 aa23.33■■□□□ 1.32
CSNK2B-207ENST00000475875 LRP6O75581 1613 aa23.33■■□□□ 1.32
CSNK2B-207ENST00000475875 CFAP65Q6ZU64 1925 aaKnown RBP23.32■■□□□ 1.32
CSNK2B-207ENST00000475875 EFCAB6Q5THR3 1501 aa23.32■■□□□ 1.32
CSNK2B-207ENST00000475875 MEX3CQ5U5Q3 659 aaKnown RBP23.31■■□□□ 1.32
CSNK2B-207ENST00000475875 DUOX2Q9NRD8 1548 aa23.3■■□□□ 1.32
CSNK2B-207ENST00000475875 RXRBP28702 533 aa23.3■■□□□ 1.32
CSNK2B-207ENST00000475875 RBM33Q96EV2 1170 aaKnown RBP23.3■■□□□ 1.32
CSNK2B-207ENST00000475875 SLC26A8Q96RN1 970 aa23.3■■□□□ 1.32
CSNK2B-207ENST00000475875 NCOA3Q9Y6Q9 1424 aa23.26■■□□□ 1.31
CSNK2B-207ENST00000475875 SHPRHQ149N8 1683 aa23.23■■□□□ 1.31
CSNK2B-207ENST00000475875 IDI1Q13907 227 aa23.23■■□□□ 1.31
CSNK2B-207ENST00000475875 ERBINQ96RT1 1412 aa23.23■■□□□ 1.31
CSNK2B-207ENST00000475875 AHDC1Q5TGY3 1603 aaPredicted RBP23.22■■□□□ 1.31
CSNK2B-207ENST00000475875 KANK1Q14678 1352 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms