RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 GGT6Q6P531 493 aa23.06■■□□□ 1.28
SNX13-207ENST00000475800 DUOX2Q9NRD8 1548 aa23.06■■□□□ 1.28
SNX13-207ENST00000475800 EIF2AK4Q9P2K8 1649 aaKnown RBP23.04■■□□□ 1.28
SNX13-207ENST00000475800 KIF15Q9NS87 1388 aa23.03■■□□□ 1.28
SNX13-207ENST00000475800 NCOA1Q15788 1441 aa23.02■■□□□ 1.28
SNX13-207ENST00000475800 CNTLNQ9NXG0 1405 aa23.02■■□□□ 1.28
SNX13-207ENST00000475800 DMRT2Q9Y5R5 561 aa23.02■■□□□ 1.28
SNX13-207ENST00000475800 CHIC2Q9UKJ5 165 aa23.01■■□□□ 1.27
SNX13-207ENST00000475800 ZMYM3Q14202 1370 aa23.01■■□□□ 1.27
SNX13-207ENST00000475800 PPP6R1Q9UPN7 881 aa23■■□□□ 1.27
SNX13-207ENST00000475800 CLTCQ00610 1675 aaKnown RBP23■■□□□ 1.27
SNX13-207ENST00000475800 ERBINQ96RT1 1412 aa22.99■■□□□ 1.27
SNX13-207ENST00000475800 ROCK1Q13464 1354 aa22.99■■□□□ 1.27
SNX13-207ENST00000475800 KIF3BO15066 747 aa22.98■■□□□ 1.27
SNX13-207ENST00000475800 RRP7BPQ9NSQ0 103 aa22.98■■□□□ 1.27
SNX13-207ENST00000475800 PTPRKQ15262 1439 aa22.97■■□□□ 1.27
SNX13-207ENST00000475800 FAM135AQ9P2D6 1515 aa22.97■■□□□ 1.27
SNX13-207ENST00000475800 RNF17Q9BXT8 1623 aaKnown RBP22.96■■□□□ 1.27
SNX13-207ENST00000475800 MROH2AA6NES4 1674 aa22.93■■□□□ 1.26
SNX13-207ENST00000475800 ITGAEP38570 1179 aa22.93■■□□□ 1.26
SNX13-207ENST00000475800 NCKAP5LQ9HCH0 1330 aa22.92■■□□□ 1.26
SNX13-207ENST00000475800 CAMSAP1Q5T5Y3 1602 aa22.91■■□□□ 1.26
SNX13-207ENST00000475800 NPATQ14207 1427 aa22.91■■□□□ 1.26
SNX13-207ENST00000475800 PTPRTO14522 1441 aa22.9■■□□□ 1.26
SNX13-207ENST00000475800 ANKRD50Q9ULJ7 1429 aa22.9■■□□□ 1.26
SNX13-207ENST00000475800 KDM5DQ9BY66 1539 aa22.87■■□□□ 1.25
SNX13-207ENST00000475800 ZC3H13Q5T200 1668 aaKnown RBP22.87■■□□□ 1.25
SNX13-207ENST00000475800 DEPDC5O75140 1603 aa22.87■■□□□ 1.25
SNX13-207ENST00000475800 PRDM15P57071 1507 aaPredicted RBP22.86■■□□□ 1.25
SNX13-207ENST00000475800 MROH1Q8NDA8 1641 aa22.85■■□□□ 1.25
SNX13-207ENST00000475800 MYO3AQ8NEV4 1616 aa22.85■■□□□ 1.25
SNX13-207ENST00000475800 WASHC2CQ9Y4E1 1318 aa22.83■■□□□ 1.25
SNX13-207ENST00000475800 GCC2Q8IWJ2 1684 aa22.82■■□□□ 1.24
SNX13-207ENST00000475800 KANK1Q14678 1352 aa22.82■■□□□ 1.24
SNX13-207ENST00000475800 FBXO31Q5XUX0 539 aaPredicted RBP22.82■■□□□ 1.24
SNX13-207ENST00000475800 CEP170BQ9Y4F5 1589 aaPredicted RBP22.81■■□□□ 1.24
SNX13-207ENST00000475800 ABCC3O15438 1527 aa22.8■■□□□ 1.24
SNX13-207ENST00000475800 ZNF335Q9H4Z2 1342 aaPredicted RBP22.8■■□□□ 1.24
SNX13-207ENST00000475800 LTBP4Q8N2S1 1624 aa22.79■■□□□ 1.24
SNX13-207ENST00000475800 HFM1A2PYH4 1435 aa22.78■■□□□ 1.24
SNX13-207ENST00000475800 CEP152O94986 1710 aa22.78■■□□□ 1.24
SNX13-207ENST00000475800 UNC13BO14795 1591 aa22.77■■□□□ 1.24
SNX13-207ENST00000475800 ZNF142P52746 1687 aaPredicted RBP22.77■■□□□ 1.24
SNX13-207ENST00000475800 VWDEQ8N2E2 1590 aa22.76■■□□□ 1.23
SNX13-207ENST00000475800 NAIPQ13075 1403 aa22.76■■□□□ 1.23
SNX13-207ENST00000475800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.75■■□□□ 1.23
SNX13-207ENST00000475800 PZPP20742 1482 aa22.74■■□□□ 1.23
SNX13-207ENST00000475800 PKD2Q13563 968 aa22.74■■□□□ 1.23
SNX13-207ENST00000475800 LMTK2Q8IWU2 1503 aa22.73■■□□□ 1.23
SNX13-207ENST00000475800 TNRQ92752 1358 aa22.73■■□□□ 1.23
SNX13-207ENST00000475800 DISP3Q9P2K9 1392 aa22.71■■□□□ 1.23
SNX13-207ENST00000475800 A2ML1A8K2U0 1454 aa22.71■■□□□ 1.23
SNX13-207ENST00000475800 PLA2R1Q13018 1463 aa22.71■■□□□ 1.23
SNX13-207ENST00000475800 ARHGAP31Q2M1Z3 1444 aa22.7■■□□□ 1.22
SNX13-207ENST00000475800 IQGAP3Q86VI3 1631 aa22.68■■□□□ 1.22
SNX13-207ENST00000475800 UBAP1LF5GYI3 381 aa22.68■■□□□ 1.22
SNX13-207ENST00000475800 TET3O43151 1660 aa22.68■■□□□ 1.22
SNX13-207ENST00000475800 CFAP65Q6ZU64 1925 aaKnown RBP22.67■■□□□ 1.22
SNX13-207ENST00000475800 ACIN1Q9UKV3 1341 aaKnown RBP22.66■■□□□ 1.22
SNX13-207ENST00000475800 EFCAB6Q5THR3 1501 aa22.66■■□□□ 1.22
SNX13-207ENST00000475800 NUP155O75694 1391 aa22.65■■□□□ 1.22
SNX13-207ENST00000475800 SPATA31D1Q6ZQQ2 1576 aa22.63■■□□□ 1.21
SNX13-207ENST00000475800 RPRD2Q5VT52 1461 aaKnown RBP22.63■■□□□ 1.21
SNX13-207ENST00000475800 ERVK-7P63135 1459 aa22.62■■□□□ 1.21
SNX13-207ENST00000475800 SCAF1Q9H7N4 1312 aaKnown RBP22.61■■□□□ 1.21
SNX13-207ENST00000475800 IQSEC2Q5JU85 1478 aa22.6■■□□□ 1.21
SNX13-207ENST00000475800 SETD5Q9C0A6 1442 aa22.6■■□□□ 1.21
SNX13-207ENST00000475800 ILDR2Q71H61 639 aa22.6■■□□□ 1.21
SNX13-207ENST00000475800 POLR1AO95602 1720 aaPredicted RBP22.6■■□□□ 1.21
SNX13-207ENST00000475800 ANKLE2Q86XL3 938 aa22.59■■□□□ 1.21
SNX13-207ENST00000475800 THEMISQ8N1K5 641 aaPredicted RBP22.58■■□□□ 1.21
SNX13-207ENST00000475800 NLRP1Q9C000 1473 aa22.58■■□□□ 1.2
SNX13-207ENST00000475800 NEURL4Q96JN8 1562 aa22.57■■□□□ 1.2
SNX13-207ENST00000475800 UGGT1Q9NYU2 1555 aa22.57■■□□□ 1.2
SNX13-207ENST00000475800 PIP4K2BP78356 416 aa22.56■■□□□ 1.2
SNX13-207ENST00000475800 E9PCH4 1651 aa22.55■■□□□ 1.2
SNX13-207ENST00000475800 TRIM52Q96A61 297 aa22.55■■□□□ 1.2
SNX13-207ENST00000475800 NOS1P29475 1434 aa22.53■■□□□ 1.2
SNX13-207ENST00000475800 NPHP4O75161 1426 aaPredicted RBP22.5■■□□□ 1.19
SNX13-207ENST00000475800 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
SNX13-207ENST00000475800 RAB3GAP2Q9H2M9 1393 aa22.5■■□□□ 1.19
SNX13-207ENST00000475800 HRCP23327 699 aa22.49■■□□□ 1.19
SNX13-207ENST00000475800 SYNMO15061 1565 aa22.48■■□□□ 1.19
SNX13-207ENST00000475800 TRIM26Q12899 539 aaPredicted RBP22.47■■□□□ 1.19
SNX13-207ENST00000475800 SLC52A1Q9NWF4 448 aa22.47■■□□□ 1.19
SNX13-207ENST00000475800 KDM5AP29375 1690 aaKnown RBP22.46■■□□□ 1.19
SNX13-207ENST00000475800 SPHKAPQ2M3C7 1700 aa22.46■■□□□ 1.19
SNX13-207ENST00000475800 SLC4A1APQ9BWU0 796 aaKnown RBP22.46■■□□□ 1.19
SNX13-207ENST00000475800 CPS1P31327 1500 aa22.44■■□□□ 1.18
SNX13-207ENST00000475800 IQGAP1P46940 1657 aa22.43■■□□□ 1.18
SNX13-207ENST00000475800 HSPA1LP34931 641 aa22.43■■□□□ 1.18
SNX13-207ENST00000475800 UBR1Q8IWV7 1749 aa22.43■■□□□ 1.18
SNX13-207ENST00000475800 PIK3C2BO00750 1634 aa22.42■■□□□ 1.18
SNX13-207ENST00000475800 TOM1O60784 492 aa22.42■■□□□ 1.18
SNX13-207ENST00000475800 MED14O60244 1454 aa22.41■■□□□ 1.18
SNX13-207ENST00000475800 IDI1Q13907 227 aa22.4■■□□□ 1.18
SNX13-207ENST00000475800 MPHOSPH9Q99550 1183 aa22.4■■□□□ 1.18
SNX13-207ENST00000475800 STAG3Q9UJ98 1225 aa22.4■■□□□ 1.18
SNX13-207ENST00000475800 TXNDC2Q86VQ3 553 aa22.39■■□□□ 1.17
SNX13-207ENST00000475800 TRPM2O94759 1503 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms