RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-218ENST00000475445 HNRNPUQ00839 825 aaKnown RBP eCLIP19.78■□□□□ 0.76
GGA1-218ENST00000475445 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
GGA1-218ENST00000475445 UHRF1BP1LA0JNW5 1464 aa19.74■□□□□ 0.75
GGA1-218ENST00000475445 ZCCHC11Q5TAX3 1644 aaKnown RBP19.73■□□□□ 0.75
GGA1-218ENST00000475445 IQGAP3Q86VI3 1631 aa19.71■□□□□ 0.75
GGA1-218ENST00000475445 ROCK2O75116 1388 aaKnown RBP19.71■□□□□ 0.75
GGA1-218ENST00000475445 ZNF326Q5BKZ1 582 aaKnown RBP19.71■□□□□ 0.75
GGA1-218ENST00000475445 ANO8Q9HCE9 1232 aaPredicted RBP19.7■□□□□ 0.74
GGA1-218ENST00000475445 DHX29Q7Z478 1369 aaKnown RBP19.7■□□□□ 0.74
GGA1-218ENST00000475445 BCANQ96GW7 911 aa19.7■□□□□ 0.74
GGA1-218ENST00000475445 CCDC184Q52MB2 194 aa19.69■□□□□ 0.74
GGA1-218ENST00000475445 MRS2Q9HD23 443 aa19.69■□□□□ 0.74
GGA1-218ENST00000475445 DUOX2Q9NRD8 1548 aa19.69■□□□□ 0.74
GGA1-218ENST00000475445 MAGI2Q86UL8 1455 aa19.66■□□□□ 0.74
GGA1-218ENST00000475445 PLCH2O75038 1416 aa19.66■□□□□ 0.74
GGA1-218ENST00000475445 TRPM1Q7Z4N2 1603 aa19.66■□□□□ 0.74
GGA1-218ENST00000475445 CARD11Q9BXL7 1154 aa19.66■□□□□ 0.74
GGA1-218ENST00000475445 CCDC144AA2RUR9 1427 aa19.66■□□□□ 0.74
GGA1-218ENST00000475445 ERBINQ96RT1 1412 aa19.65■□□□□ 0.74
GGA1-218ENST00000475445 ZBED9Q6R2W3 1325 aa19.64■□□□□ 0.73
GGA1-218ENST00000475445 UBE2Q2Q8WVN8 375 aa19.64■□□□□ 0.73
GGA1-218ENST00000475445 ABCC1P33527 1531 aa19.63■□□□□ 0.73
GGA1-218ENST00000475445 LAMC1P11047 1609 aa19.63■□□□□ 0.73
GGA1-218ENST00000475445 DCAF11Q8TEB1 546 aa19.62■□□□□ 0.73
GGA1-218ENST00000475445 E9PCH4 1651 aa19.62■□□□□ 0.73
GGA1-218ENST00000475445 ARAP3Q8WWN8 1544 aa19.61■□□□□ 0.73
GGA1-218ENST00000475445 FAM9BQ8IZU0 186 aa19.61■□□□□ 0.73
GGA1-218ENST00000475445 PRAG1Q86YV5 1406 aa19.61■□□□□ 0.73
GGA1-218ENST00000475445 ATP10AO60312 1499 aa19.61■□□□□ 0.73
GGA1-218ENST00000475445 PLA2R1Q13018 1463 aa19.6■□□□□ 0.73
GGA1-218ENST00000475445 ERICH6BQ5W0A0 696 aa19.59■□□□□ 0.73
GGA1-218ENST00000475445 EFCAB2Q5VUJ9 269 aa19.59■□□□□ 0.73
GGA1-218ENST00000475445 KDM2AQ9Y2K7 1162 aa19.59■□□□□ 0.73
GGA1-218ENST00000475445 EIF2AK4Q9P2K8 1649 aaKnown RBP19.58■□□□□ 0.73
GGA1-218ENST00000475445 KTN1Q86UP2 1357 aaKnown RBP19.56■□□□□ 0.72
GGA1-218ENST00000475445 A2MP01023 1474 aa19.56■□□□□ 0.72
GGA1-218ENST00000475445 GPRASP1Q5JY77 1395 aa19.56■□□□□ 0.72
GGA1-218ENST00000475445 POLR3GLQ9BT43 218 aa19.55■□□□□ 0.72
GGA1-218ENST00000475445 KIF13AQ9H1H9 1805 aa19.55■□□□□ 0.72
GGA1-218ENST00000475445 ST20-MTHFSA0A0A6YYL1 179 aa19.55■□□□□ 0.72
GGA1-218ENST00000475445 WDR7Q9Y4E6 1490 aa19.54■□□□□ 0.72
GGA1-218ENST00000475445 NPM1P06748 294 aaKnown RBP eCLIP19.54■□□□□ 0.72
GGA1-218ENST00000475445 RTEL1-TNFRSF6BF6WH68 1400 aa19.53■□□□□ 0.72
GGA1-218ENST00000475445 PRDM15P57071 1507 aaPredicted RBP19.53■□□□□ 0.72
GGA1-218ENST00000475445 MYT1LQ9UL68 1186 aa19.53■□□□□ 0.72
GGA1-218ENST00000475445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.52■□□□□ 0.721e-6■□□□□ 8.7
GGA1-218ENST00000475445 ASXL2Q76L83 1435 aa19.51■□□□□ 0.71
GGA1-218ENST00000475445 TRAPPC8Q9Y2L5 1435 aa19.51■□□□□ 0.71
GGA1-218ENST00000475445 ZFYVE16Q7Z3T8 1539 aa19.5■□□□□ 0.71
GGA1-218ENST00000475445 DIP2BQ9P265 1576 aa19.49■□□□□ 0.71
GGA1-218ENST00000475445 EIF5BO60841 1220 aaKnown RBP19.49■□□□□ 0.71
GGA1-218ENST00000475445 RNF17Q9BXT8 1623 aaKnown RBP19.48■□□□□ 0.71
GGA1-218ENST00000475445 DEPDC5O75140 1603 aa19.48■□□□□ 0.71
GGA1-218ENST00000475445 ABCA9Q8IUA7 1624 aa19.47■□□□□ 0.71
GGA1-218ENST00000475445 SMG6Q86US8 1419 aaKnown RBP19.47■□□□□ 0.71
GGA1-218ENST00000475445 RALBP1Q15311 655 aa19.47■□□□□ 0.71
GGA1-218ENST00000475445 COL17A1Q9UMD9 1497 aaPredicted RBP19.46■□□□□ 0.71
GGA1-218ENST00000475445 BRD4O60885 1362 aaPredicted RBP19.46■□□□□ 0.71
GGA1-218ENST00000475445 RGL3Q3MIN7 710 aa19.45■□□□□ 0.7
GGA1-218ENST00000475445 SPAG9O60271 1321 aaKnown RBP19.45■□□□□ 0.7
GGA1-218ENST00000475445 INO80Q9ULG1 1556 aaPredicted RBP19.44■□□□□ 0.7
GGA1-218ENST00000475445 MYBBP1AQ9BQG0 1328 aaKnown RBP19.44■□□□□ 0.7
GGA1-218ENST00000475445 CEP152O94986 1710 aa19.44■□□□□ 0.7
GGA1-218ENST00000475445 TRPM2O94759 1503 aa19.44■□□□□ 0.7
GGA1-218ENST00000475445 PNISRQ8TF01 805 aaKnown RBP19.44■□□□□ 0.7
GGA1-218ENST00000475445 SPHKAPQ2M3C7 1700 aa19.43■□□□□ 0.7
GGA1-218ENST00000475445 PPP4R2Q9NY27 417 aa19.43■□□□□ 0.7
GGA1-218ENST00000475445 TET3O43151 1660 aa19.43■□□□□ 0.7
GGA1-218ENST00000475445 TMC1Q8TDI8 760 aa19.42■□□□□ 0.7
GGA1-218ENST00000475445 LRPPRCP42704 1394 aaKnown RBP19.42■□□□□ 0.7
GGA1-218ENST00000475445 TRHP20396 242 aaPredicted RBP19.42■□□□□ 0.7
GGA1-218ENST00000475445 NBPF1Q3BBV0 1214 aa19.42■□□□□ 0.7
GGA1-218ENST00000475445 IRX6P78412 446 aaPredicted RBP19.41■□□□□ 0.7
GGA1-218ENST00000475445 ATP7AQ04656 1500 aa19.41■□□□□ 0.7
GGA1-218ENST00000475445 MADDQ8WXG6 1647 aa19.4■□□□□ 0.7
GGA1-218ENST00000475445 PARD3Q8TEW0 1356 aa19.39■□□□□ 0.69
GGA1-218ENST00000475445 FANCAO15360 1455 aa19.39■□□□□ 0.69
GGA1-218ENST00000475445 VWDEQ8N2E2 1590 aa19.39■□□□□ 0.69
GGA1-218ENST00000475445 PTPRTO14522 1441 aa19.39■□□□□ 0.69
GGA1-218ENST00000475445 NUDCQ9Y266 331 aa19.38■□□□□ 0.69
GGA1-218ENST00000475445 WASHC2CQ9Y4E1 1318 aa19.38■□□□□ 0.69
GGA1-218ENST00000475445 CNGB1Q14028 1251 aaPredicted RBP19.38■□□□□ 0.69
GGA1-218ENST00000475445 STAC3Q96MF2 364 aa19.38■□□□□ 0.69
GGA1-218ENST00000475445 TESK2Q96S53 571 aa19.38■□□□□ 0.69
GGA1-218ENST00000475445 IQGAP1P46940 1657 aa19.37■□□□□ 0.69
GGA1-218ENST00000475445 GLI2P10070 1586 aa19.37■□□□□ 0.69
GGA1-218ENST00000475445 DAXXQ9UER7 740 aaPredicted RBP19.37■□□□□ 0.69
GGA1-218ENST00000475445 NEURL4Q96JN8 1562 aa19.37■□□□□ 0.69
GGA1-218ENST00000475445 CLTCL1P53675 1640 aa19.36■□□□□ 0.69
GGA1-218ENST00000475445 AFAP1Q8N556 730 aa19.36■□□□□ 0.69
GGA1-218ENST00000475445 SALL2Q9Y467 1007 aaPredicted RBP19.36■□□□□ 0.69
GGA1-218ENST00000475445 RBM19Q9Y4C8 960 aaKnown RBP19.36■□□□□ 0.69
GGA1-218ENST00000475445 DISP3Q9P2K9 1392 aa19.34■□□□□ 0.69
GGA1-218ENST00000475445 KANK1Q14678 1352 aa19.34■□□□□ 0.69
GGA1-218ENST00000475445 NLRP13Q86W25 1043 aa19.34■□□□□ 0.69
GGA1-218ENST00000475445 MAP3K4Q9Y6R4 1608 aa19.33■□□□□ 0.69
GGA1-218ENST00000475445 PER1O15534 1290 aaPredicted RBP19.33■□□□□ 0.69
GGA1-218ENST00000475445 RNF123Q5XPI4 1314 aa19.33■□□□□ 0.69
GGA1-218ENST00000475445 PPRC1Q5VV67 1664 aaKnown RBP19.33■□□□□ 0.68
GGA1-218ENST00000475445 TMF1P82094 1093 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms