RNA–Protein interactions for RNA: ENST00000475423.1

DKC1-208, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-208ENST00000475423 TSPY10P0CW01 314 aa26.16■■□□□ 1.78
DKC1-208ENST00000475423 PKD2Q13563 968 aa26.16■■□□□ 1.78
DKC1-208ENST00000475423 TCOF1Q13428 1488 aaKnown RBP26.15■■□□□ 1.78
DKC1-208ENST00000475423 KANK4Q5T7N3 995 aaPredicted RBP26.14■■□□□ 1.78
DKC1-208ENST00000475423 IQSEC2Q5JU85 1478 aa26.13■■□□□ 1.77
DKC1-208ENST00000475423 KDM5DQ9BY66 1539 aa26.13■■□□□ 1.77
DKC1-208ENST00000475423 A2ML1A8K2U0 1454 aa26.12■■□□□ 1.77
DKC1-208ENST00000475423 FBXO31Q5XUX0 539 aaPredicted RBP26.11■■□□□ 1.77
DKC1-208ENST00000475423 WASHC2CQ9Y4E1 1318 aa26.11■■□□□ 1.77
DKC1-208ENST00000475423 PZPP20742 1482 aa26.11■■□□□ 1.77
DKC1-208ENST00000475423 DNMT1P26358 1616 aaKnown RBP26.1■■□□□ 1.77
DKC1-208ENST00000475423 MAST1Q9Y2H9 1570 aa26.09■■□□□ 1.77
DKC1-208ENST00000475423 MIA2Q96PC5 1412 aa26.08■■□□□ 1.77
DKC1-208ENST00000475423 TNRQ92752 1358 aa26.07■■□□□ 1.76
DKC1-208ENST00000475423 ZNF335Q9H4Z2 1342 aaPredicted RBP26.06■■□□□ 1.76
DKC1-208ENST00000475423 MYOM3Q5VTT5 1437 aa26.05■■□□□ 1.76
DKC1-208ENST00000475423 RNF17Q9BXT8 1623 aaKnown RBP26.02■■□□□ 1.76
DKC1-208ENST00000475423 EIF2AK4Q9P2K8 1649 aaKnown RBP25.98■■□□□ 1.75
DKC1-208ENST00000475423 NLRP1Q9C000 1473 aa25.98■■□□□ 1.75
DKC1-208ENST00000475423 ABCC3O15438 1527 aa25.96■■□□□ 1.75
DKC1-208ENST00000475423 POLR1AO95602 1720 aaPredicted RBP25.96■■□□□ 1.75
DKC1-208ENST00000475423 THEMISQ8N1K5 641 aaPredicted RBP25.95■■□□□ 1.74
DKC1-208ENST00000475423 ZC3H13Q5T200 1668 aaKnown RBP25.95■■□□□ 1.74
DKC1-208ENST00000475423 NEURL4Q96JN8 1562 aa25.95■■□□□ 1.74
DKC1-208ENST00000475423 MROH1Q8NDA8 1641 aa25.93■■□□□ 1.74
DKC1-208ENST00000475423 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.93■■□□□ 1.748e-7■■■□□ 19.1
DKC1-208ENST00000475423 ANKLE2Q86XL3 938 aa25.92■■□□□ 1.74
DKC1-208ENST00000475423 DUOX2Q9NRD8 1548 aa25.92■■□□□ 1.74
DKC1-208ENST00000475423 UGGT1Q9NYU2 1555 aa25.91■■□□□ 1.74
DKC1-208ENST00000475423 SPATA31D1Q6ZQQ2 1576 aa25.9■■□□□ 1.74
DKC1-208ENST00000475423 APLP2Q06481 763 aa25.9■■□□□ 1.74
DKC1-208ENST00000475423 ABCC5O15440 1437 aa25.89■■□□□ 1.74
DKC1-208ENST00000475423 SHANK2Q9UPX8 1470 aa25.89■■□□□ 1.73
DKC1-208ENST00000475423 UBAP1LF5GYI3 381 aa25.88■■□□□ 1.73
DKC1-208ENST00000475423 PTPN23Q9H3S7 1636 aa25.88■■□□□ 1.73
DKC1-208ENST00000475423 MED14O60244 1454 aa25.87■■□□□ 1.73
DKC1-208ENST00000475423 ERVK-7P63135 1459 aa25.86■■□□□ 1.73
DKC1-208ENST00000475423 KIF15Q9NS87 1388 aa25.86■■□□□ 1.73
DKC1-208ENST00000475423 DEPDC5O75140 1603 aa25.86■■□□□ 1.73
DKC1-208ENST00000475423 CROCC2H7BZ55 1655 aa25.86■■□□□ 1.73
DKC1-208ENST00000475423 DISP3Q9P2K9 1392 aa25.85■■□□□ 1.73
DKC1-208ENST00000475423 CEP152O94986 1710 aa25.85■■□□□ 1.73
DKC1-208ENST00000475423 CPS1P31327 1500 aa25.83■■□□□ 1.73
DKC1-208ENST00000475423 ERBINQ96RT1 1412 aa25.83■■□□□ 1.73
DKC1-208ENST00000475423 NPHP4O75161 1426 aaPredicted RBP25.82■■□□□ 1.72
DKC1-208ENST00000475423 DAPK1P53355 1430 aa25.82■■□□□ 1.72
DKC1-208ENST00000475423 FGD6Q6ZV73 1430 aa25.82■■□□□ 1.72
DKC1-208ENST00000475423 RRP7BPQ9NSQ0 103 aa25.82■■□□□ 1.72
DKC1-208ENST00000475423 PRDM15P57071 1507 aaPredicted RBP25.81■■□□□ 1.72
DKC1-208ENST00000475423 VWDEQ8N2E2 1590 aa25.81■■□□□ 1.72
DKC1-208ENST00000475423 CFAP65Q6ZU64 1925 aaKnown RBP25.8■■□□□ 1.72
DKC1-208ENST00000475423 ARHGAP31Q2M1Z3 1444 aa25.8■■□□□ 1.72
DKC1-208ENST00000475423 ILDR2Q71H61 639 aa25.76■■□□□ 1.71
DKC1-208ENST00000475423 IQGAP1P46940 1657 aa25.76■■□□□ 1.71
DKC1-208ENST00000475423 UBR1Q8IWV7 1749 aa25.75■■□□□ 1.71
DKC1-208ENST00000475423 ANKRD30AQ9BXX3 1397 aa25.72■■□□□ 1.71
DKC1-208ENST00000475423 TOM1O60784 492 aa25.71■■□□□ 1.71
DKC1-208ENST00000475423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.71■■□□□ 1.712e-7■■■□□ 15.2
DKC1-208ENST00000475423 CHIC2Q9UKJ5 165 aa25.7■■□□□ 1.7
DKC1-208ENST00000475423 KANK1Q14678 1352 aa25.69■■□□□ 1.7
DKC1-208ENST00000475423 ARHGAP23Q9P227 1491 aa25.69■■□□□ 1.7
DKC1-208ENST00000475423 SLIT1O75093 1534 aa25.68■■□□□ 1.7
DKC1-208ENST00000475423 LMTK2Q8IWU2 1503 aa25.68■■□□□ 1.7
DKC1-208ENST00000475423 SCAF11Q99590 1463 aaKnown RBP25.67■■□□□ 1.7
DKC1-208ENST00000475423 STRCP1A6NGW2 1772 aa25.67■■□□□ 1.7
DKC1-208ENST00000475423 LTKP29376 864 aa25.66■■□□□ 1.7
DKC1-208ENST00000475423 PIP4K2BP78356 416 aa25.65■■□□□ 1.7
DKC1-208ENST00000475423 ADGRL2O95490 1459 aa25.65■■□□□ 1.7
DKC1-208ENST00000475423 TXNDC2Q86VQ3 553 aa25.64■■□□□ 1.7
DKC1-208ENST00000475423 PIK3C2BO00750 1634 aa25.63■■□□□ 1.69
DKC1-208ENST00000475423 ALKQ9UM73 1620 aa25.63■■□□□ 1.69
DKC1-208ENST00000475423 LRRC7Q96NW7 1537 aa25.63■■□□□ 1.69
DKC1-208ENST00000475423 SCAF1Q9H7N4 1312 aaKnown RBP25.63■■□□□ 1.69
DKC1-208ENST00000475423 HSPA1LP34931 641 aa25.62■■□□□ 1.69
DKC1-208ENST00000475423 SOCS7O14512 581 aa25.61■■□□□ 1.69
DKC1-208ENST00000475423 TMEM2Q9UHN6 1383 aa25.59■■□□□ 1.69
DKC1-208ENST00000475423 KDM5AP29375 1690 aaKnown RBP25.59■■□□□ 1.69
DKC1-208ENST00000475423 IDI1Q13907 227 aa25.59■■□□□ 1.69
DKC1-208ENST00000475423 EID1Q9Y6B2 187 aa25.59■■□□□ 1.69
DKC1-208ENST00000475423 SYNMO15061 1565 aa25.58■■□□□ 1.69
DKC1-208ENST00000475423 FAM50AQ14320 339 aaKnown RBP25.58■■□□□ 1.69
DKC1-208ENST00000475423 NOS1P29475 1434 aa25.57■■□□□ 1.68
DKC1-208ENST00000475423 EFCAB6Q5THR3 1501 aa25.57■■□□□ 1.68
DKC1-208ENST00000475423 STAG3Q9UJ98 1225 aa25.55■■□□□ 1.68
DKC1-208ENST00000475423 ANKRD50Q9ULJ7 1429 aa25.54■■□□□ 1.68
DKC1-208ENST00000475423 SLC52A1Q9NWF4 448 aa25.51■■□□□ 1.67
DKC1-208ENST00000475423 RPRD2Q5VT52 1461 aaKnown RBP25.49■■□□□ 1.67
DKC1-208ENST00000475423 TET3O43151 1660 aa25.47■■□□□ 1.67
DKC1-208ENST00000475423 ADGRB3O60242 1522 aa25.47■■□□□ 1.67
DKC1-208ENST00000475423 XIRP1Q702N8 1843 aaKnown RBP25.47■■□□□ 1.67
DKC1-208ENST00000475423 MED1Q15648 1581 aaPredicted RBP25.45■■□□□ 1.66
DKC1-208ENST00000475423 ROCK1Q13464 1354 aa25.42■■□□□ 1.66
DKC1-208ENST00000475423 UNC13BO14795 1591 aa25.41■■□□□ 1.66
DKC1-208ENST00000475423 KCNA6P17658 529 aa25.41■■□□□ 1.66
DKC1-208ENST00000475423 SLC26A8Q96RN1 970 aa25.4■■□□□ 1.66
DKC1-208ENST00000475423 GCC2Q8IWJ2 1684 aa25.39■■□□□ 1.65
DKC1-208ENST00000475423 ZFYVE9O95405 1425 aa25.37■■□□□ 1.65
DKC1-208ENST00000475423 TMEM94Q12767 1356 aa25.36■■□□□ 1.65
DKC1-208ENST00000475423 MYO5BQ9ULV0 1848 aa25.35■■□□□ 1.65
DKC1-208ENST00000475423 TMEM131LA2VDJ0 1609 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms