RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 CCDC141Q6ZP82 1450 aa14.8□□□□□ -0.04
PDPN-204ENST00000475043 PLXNC1O60486 1568 aa14.8□□□□□ -0.04
PDPN-204ENST00000475043 HSPA2P54652 639 aa14.79□□□□□ -0.04
PDPN-204ENST00000475043 RTEL1-TNFRSF6BF6WH68 1400 aa14.78□□□□□ -0.04
PDPN-204ENST00000475043 RSPH4AQ5TD94 716 aa14.77□□□□□ -0.05
PDPN-204ENST00000475043 CLTCQ00610 1675 aaKnown RBP14.77□□□□□ -0.05
PDPN-204ENST00000475043 ARHGEF5Q12774 1597 aa14.77□□□□□ -0.05
PDPN-204ENST00000475043 MYOM3Q5VTT5 1437 aa14.76□□□□□ -0.05
PDPN-204ENST00000475043 CNTLNQ9NXG0 1405 aa14.76□□□□□ -0.05
PDPN-204ENST00000475043 GGT6Q6P531 493 aa14.76□□□□□ -0.05
PDPN-204ENST00000475043 MROH2AA6NES4 1674 aa14.75□□□□□ -0.05
PDPN-204ENST00000475043 TSPY4P0CV99 314 aa14.75□□□□□ -0.05
PDPN-204ENST00000475043 TSPY10P0CW01 314 aa14.75□□□□□ -0.05
PDPN-204ENST00000475043 FOXD4L1Q9NU39 408 aa14.74□□□□□ -0.05
PDPN-204ENST00000475043 MIA2Q96PC5 1412 aa14.74□□□□□ -0.05
PDPN-204ENST00000475043 UHRF1BP1Q6BDS2 1440 aa14.73□□□□□ -0.05
PDPN-204ENST00000475043 SETD1BQ9UPS6 1966 aaKnown RBP14.73□□□□□ -0.05
PDPN-204ENST00000475043 DHX29Q7Z478 1369 aaKnown RBP14.73□□□□□ -0.05
PDPN-204ENST00000475043 ABCB7O75027 752 aa14.72□□□□□ -0.05
PDPN-204ENST00000475043 ZMYM3Q14202 1370 aa14.71□□□□□ -0.06
PDPN-204ENST00000475043 KIF3BO15066 747 aa14.7□□□□□ -0.06
PDPN-204ENST00000475043 PTPN23Q9H3S7 1636 aa14.7□□□□□ -0.06
PDPN-204ENST00000475043 MAST1Q9Y2H9 1570 aa14.69□□□□□ -0.06
PDPN-204ENST00000475043 NPATQ14207 1427 aa14.66□□□□□ -0.06
PDPN-204ENST00000475043 CROCC2H7BZ55 1655 aa14.66□□□□□ -0.06
PDPN-204ENST00000475043 STRCQ7RTU9 1775 aa14.65□□□□□ -0.06
PDPN-204ENST00000475043 ILDR1Q86SU0 546 aaPredicted RBP14.65□□□□□ -0.06
PDPN-204ENST00000475043 FGD6Q6ZV73 1430 aa14.65□□□□□ -0.06
PDPN-204ENST00000475043 KDM5DQ9BY66 1539 aa14.64□□□□□ -0.07
PDPN-204ENST00000475043 MYO3AQ8NEV4 1616 aa14.63□□□□□ -0.07
PDPN-204ENST00000475043 PTPRKQ15262 1439 aa14.63□□□□□ -0.07
PDPN-204ENST00000475043 WASHC2CQ9Y4E1 1318 aa14.63□□□□□ -0.07
PDPN-204ENST00000475043 DNMT1P26358 1616 aaKnown RBP14.63□□□□□ -0.07
PDPN-204ENST00000475043 EIF2AK4Q9P2K8 1649 aaKnown RBP14.63□□□□□ -0.07
PDPN-204ENST00000475043 ABCC5O15440 1437 aa14.61□□□□□ -0.07
PDPN-204ENST00000475043 DAPK1P53355 1430 aa14.61□□□□□ -0.07
PDPN-204ENST00000475043 RNF17Q9BXT8 1623 aaKnown RBP14.61□□□□□ -0.07
PDPN-204ENST00000475043 TCOF1Q13428 1488 aaKnown RBP14.61□□□□□ -0.07
PDPN-204ENST00000475043 SHANK2Q9UPX8 1470 aa14.61□□□□□ -0.07
PDPN-204ENST00000475043 DUOX2Q9NRD8 1548 aa14.61□□□□□ -0.07
PDPN-204ENST00000475043 FAM135AQ9P2D6 1515 aa14.61□□□□□ -0.07
PDPN-204ENST00000475043 ZNF142P52746 1687 aaPredicted RBP14.6□□□□□ -0.07
PDPN-204ENST00000475043 CAMSAP1Q5T5Y3 1602 aa14.59□□□□□ -0.07
PDPN-204ENST00000475043 RRP7BPQ9NSQ0 103 aa14.59□□□□□ -0.07
PDPN-204ENST00000475043 CEP170BQ9Y4F5 1589 aaPredicted RBP14.59□□□□□ -0.07
PDPN-204ENST00000475043 KIF15Q9NS87 1388 aa14.59□□□□□ -0.07
PDPN-204ENST00000475043 ZC3H13Q5T200 1668 aaKnown RBP14.58□□□□□ -0.07
PDPN-204ENST00000475043 FAM50AQ14320 339 aaKnown RBP14.58□□□□□ -0.08
PDPN-204ENST00000475043 CHIC2Q9UKJ5 165 aa14.58□□□□□ -0.08
PDPN-204ENST00000475043 FBXO31Q5XUX0 539 aaPredicted RBP14.57□□□□□ -0.08
PDPN-204ENST00000475043 CEP152O94986 1710 aa14.57□□□□□ -0.08
PDPN-204ENST00000475043 PZPP20742 1482 aa14.57□□□□□ -0.08
PDPN-204ENST00000475043 ZBTB22O15209 634 aa14.56□□□□□ -0.08
PDPN-204ENST00000475043 NCOA1Q15788 1441 aa14.56□□□□□ -0.08
PDPN-204ENST00000475043 MROH1Q8NDA8 1641 aa14.55□□□□□ -0.08
PDPN-204ENST00000475043 TNRQ92752 1358 aa14.55□□□□□ -0.08
PDPN-204ENST00000475043 ABCC3O15438 1527 aa14.55□□□□□ -0.08
PDPN-204ENST00000475043 PPARGC1BQ86YN6 1023 aaKnown RBP14.54□□□□□ -0.08
PDPN-204ENST00000475043 FBXO41Q8TF61 875 aa14.54□□□□□ -0.08
PDPN-204ENST00000475043 ANKRD30AQ9BXX3 1397 aa14.54□□□□□ -0.08
PDPN-204ENST00000475043 ERBINQ96RT1 1412 aa14.54□□□□□ -0.08
PDPN-204ENST00000475043 A2ML1A8K2U0 1454 aa14.53□□□□□ -0.08
PDPN-204ENST00000475043 PTPRTO14522 1441 aa14.53□□□□□ -0.08
PDPN-204ENST00000475043 CFAP65Q6ZU64 1925 aaKnown RBP14.53□□□□□ -0.08
PDPN-204ENST00000475043 NCKAP5LQ9HCH0 1330 aa14.52□□□□□ -0.08
PDPN-204ENST00000475043 PRDM15P57071 1507 aaPredicted RBP14.51□□□□□ -0.09
PDPN-204ENST00000475043 CERKQ8TCT0 537 aa14.51□□□□□ -0.09
PDPN-204ENST00000475043 PLA2R1Q13018 1463 aa14.5□□□□□ -0.09
PDPN-204ENST00000475043 DEPDC5O75140 1603 aa14.5□□□□□ -0.09
PDPN-204ENST00000475043 PKD2Q13563 968 aa14.49□□□□□ -0.09
PDPN-204ENST00000475043 POLA2Q14181 598 aa14.49□□□□□ -0.09
PDPN-204ENST00000475043 NLRP1Q9C000 1473 aa14.49□□□□□ -0.09
PDPN-204ENST00000475043 KANK1Q14678 1352 aa14.48□□□□□ -0.09
PDPN-204ENST00000475043 POLR1AO95602 1720 aaPredicted RBP14.48□□□□□ -0.09
PDPN-204ENST00000475043 ADGRL2O95490 1459 aa14.48□□□□□ -0.09
PDPN-204ENST00000475043 SPATA31D1Q6ZQQ2 1576 aa14.47□□□□□ -0.09
PDPN-204ENST00000475043 UGGT1Q9NYU2 1555 aa14.47□□□□□ -0.09
PDPN-204ENST00000475043 ERVK-7P63135 1459 aa14.47□□□□□ -0.09
PDPN-204ENST00000475043 ATF5Q9Y2D1 282 aaPredicted RBP14.47□□□□□ -0.09
PDPN-204ENST00000475043 THEMISQ8N1K5 641 aaPredicted RBP14.46□□□□□ -0.09
PDPN-204ENST00000475043 ITGAEP38570 1179 aa14.45□□□□□ -0.1
PDPN-204ENST00000475043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.45□□□□□ -0.1
PDPN-204ENST00000475043 ANKRD50Q9ULJ7 1429 aa14.43□□□□□ -0.1
PDPN-204ENST00000475043 ARHGAP31Q2M1Z3 1444 aa14.42□□□□□ -0.1
PDPN-204ENST00000475043 LTBP4Q8N2S1 1624 aa14.42□□□□□ -0.1
PDPN-204ENST00000475043 ANKLE2Q86XL3 938 aa14.42□□□□□ -0.1
PDPN-204ENST00000475043 UBR1Q8IWV7 1749 aa14.41□□□□□ -0.1
PDPN-204ENST00000475043 VWDEQ8N2E2 1590 aa14.41□□□□□ -0.1
PDPN-204ENST00000475043 NEURL4Q96JN8 1562 aa14.41□□□□□ -0.1
PDPN-204ENST00000475043 LMTK2Q8IWU2 1503 aa14.41□□□□□ -0.1
PDPN-204ENST00000475043 ZNF335Q9H4Z2 1342 aaPredicted RBP14.41□□□□□ -0.1
PDPN-204ENST00000475043 EFCAB6Q5THR3 1501 aa14.39□□□□□ -0.11
PDPN-204ENST00000475043 PIK3C2BO00750 1634 aa14.38□□□□□ -0.11
PDPN-204ENST00000475043 ROCK1Q13464 1354 aa14.38□□□□□ -0.11
PDPN-204ENST00000475043 IQGAP1P46940 1657 aa14.37□□□□□ -0.11
PDPN-204ENST00000475043 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
PDPN-204ENST00000475043 UNC13BO14795 1591 aa14.36□□□□□ -0.11
PDPN-204ENST00000475043 NPHP4O75161 1426 aaPredicted RBP14.36□□□□□ -0.11
PDPN-204ENST00000475043 TET3O43151 1660 aa14.36□□□□□ -0.11
PDPN-204ENST00000475043 GCC2Q8IWJ2 1684 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms