RNA–Protein interactions for RNA: ENST00000474706.6

PDPK1-210, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 5

Gene PDPK1, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-210ENST00000474706 SHANK2Q9UPX8 1470 aa20.88■□□□□ 0.93
PDPK1-210ENST00000474706 NCOA1Q15788 1441 aa20.87■□□□□ 0.93
PDPK1-210ENST00000474706 APLP2Q06481 763 aa20.87■□□□□ 0.93
PDPK1-210ENST00000474706 CEP170BQ9Y4F5 1589 aaPredicted RBP20.87■□□□□ 0.93
PDPK1-210ENST00000474706 DMRT2Q9Y5R5 561 aa20.85■□□□□ 0.93
PDPK1-210ENST00000474706 ZC3H13Q5T200 1668 aaKnown RBP20.85■□□□□ 0.93
PDPK1-210ENST00000474706 PTPRTO14522 1441 aa20.85■□□□□ 0.93
PDPK1-210ENST00000474706 PZPP20742 1482 aa20.84■□□□□ 0.93
PDPK1-210ENST00000474706 TCOF1Q13428 1488 aaKnown RBP20.84■□□□□ 0.93
PDPK1-210ENST00000474706 KIF3BO15066 747 aa20.84■□□□□ 0.93
PDPK1-210ENST00000474706 CAMSAP1Q5T5Y3 1602 aa20.84■□□□□ 0.93
PDPK1-210ENST00000474706 FGD6Q6ZV73 1430 aa20.83■□□□□ 0.93
PDPK1-210ENST00000474706 DNMT1P26358 1616 aaKnown RBP20.82■□□□□ 0.92
PDPK1-210ENST00000474706 DUOX2Q9NRD8 1548 aa20.82■□□□□ 0.92
PDPK1-210ENST00000474706 PLA2R1Q13018 1463 aa20.81■□□□□ 0.92
PDPK1-210ENST00000474706 MROH1Q8NDA8 1641 aa20.81■□□□□ 0.92
PDPK1-210ENST00000474706 A2ML1A8K2U0 1454 aa20.79■□□□□ 0.92
PDPK1-210ENST00000474706 ABCC5O15440 1437 aa20.78■□□□□ 0.92
PDPK1-210ENST00000474706 ABCC3O15438 1527 aa20.78■□□□□ 0.92
PDPK1-210ENST00000474706 DAPK1P53355 1430 aa20.78■□□□□ 0.92
PDPK1-210ENST00000474706 WASHC2CQ9Y4E1 1318 aa20.77■□□□□ 0.91
PDPK1-210ENST00000474706 PRDM15P57071 1507 aaPredicted RBP20.76■□□□□ 0.91
PDPK1-210ENST00000474706 ERBINQ96RT1 1412 aa20.76■□□□□ 0.91
PDPK1-210ENST00000474706 TNRQ92752 1358 aa20.75■□□□□ 0.91
PDPK1-210ENST00000474706 KIF15Q9NS87 1388 aa20.75■□□□□ 0.91
PDPK1-210ENST00000474706 CERKQ8TCT0 537 aa20.75■□□□□ 0.91
PDPK1-210ENST00000474706 DEPDC5O75140 1603 aa20.73■□□□□ 0.91
PDPK1-210ENST00000474706 CEP152O94986 1710 aa20.73■□□□□ 0.91
PDPK1-210ENST00000474706 SPATA31D1Q6ZQQ2 1576 aa20.72■□□□□ 0.91
PDPK1-210ENST00000474706 NLRP1Q9C000 1473 aa20.71■□□□□ 0.91
PDPK1-210ENST00000474706 LTBP4Q8N2S1 1624 aa20.71■□□□□ 0.91
PDPK1-210ENST00000474706 POLR1AO95602 1720 aaPredicted RBP20.7■□□□□ 0.9
PDPK1-210ENST00000474706 PKD2Q13563 968 aa20.69■□□□□ 0.9
PDPK1-210ENST00000474706 FBXO31Q5XUX0 539 aaPredicted RBP20.69■□□□□ 0.9
PDPK1-210ENST00000474706 ADGRL2O95490 1459 aa20.68■□□□□ 0.9
PDPK1-210ENST00000474706 ERVK-7P63135 1459 aa20.67■□□□□ 0.9
PDPK1-210ENST00000474706 IQSEC2Q5JU85 1478 aa20.66■□□□□ 0.9
PDPK1-210ENST00000474706 NEURL4Q96JN8 1562 aa20.65■□□□□ 0.9
PDPK1-210ENST00000474706 UGGT1Q9NYU2 1555 aa20.65■□□□□ 0.9
PDPK1-210ENST00000474706 ANKRD30AQ9BXX3 1397 aa20.65■□□□□ 0.9
PDPK1-210ENST00000474706 NCKAP5LQ9HCH0 1330 aa20.65■□□□□ 0.9
PDPK1-210ENST00000474706 ARHGAP31Q2M1Z3 1444 aa20.63■□□□□ 0.89
PDPK1-210ENST00000474706 RRP7BPQ9NSQ0 103 aa20.62■□□□□ 0.89
PDPK1-210ENST00000474706 VWDEQ8N2E2 1590 aa20.62■□□□□ 0.89
PDPK1-210ENST00000474706 LMTK2Q8IWU2 1503 aa20.61■□□□□ 0.89
PDPK1-210ENST00000474706 KANK1Q14678 1352 aa20.58■□□□□ 0.88
PDPK1-210ENST00000474706 UBR1Q8IWV7 1749 aa20.57■□□□□ 0.88
PDPK1-210ENST00000474706 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.57■□□□□ 0.88
PDPK1-210ENST00000474706 MED14O60244 1454 aa20.56■□□□□ 0.88
PDPK1-210ENST00000474706 THEMISQ8N1K5 641 aaPredicted RBP20.56■□□□□ 0.88
PDPK1-210ENST00000474706 CHIC2Q9UKJ5 165 aa20.56■□□□□ 0.88
PDPK1-210ENST00000474706 ZNF335Q9H4Z2 1342 aaPredicted RBP20.55■□□□□ 0.88
PDPK1-210ENST00000474706 CFAP65Q6ZU64 1925 aaKnown RBP20.55■□□□□ 0.88
PDPK1-210ENST00000474706 EFCAB6Q5THR3 1501 aa20.55■□□□□ 0.88
PDPK1-210ENST00000474706 FAM50AQ14320 339 aaKnown RBP20.55■□□□□ 0.88
PDPK1-210ENST00000474706 IQGAP1P46940 1657 aa20.53■□□□□ 0.88
PDPK1-210ENST00000474706 ANKRD50Q9ULJ7 1429 aa20.52■□□□□ 0.87
PDPK1-210ENST00000474706 ANKLE2Q86XL3 938 aa20.51■□□□□ 0.87
PDPK1-210ENST00000474706 NPHP4O75161 1426 aaPredicted RBP20.51■□□□□ 0.87
PDPK1-210ENST00000474706 KDM5AP29375 1690 aaKnown RBP20.51■□□□□ 0.87
PDPK1-210ENST00000474706 CPS1P31327 1500 aa20.5■□□□□ 0.87
PDPK1-210ENST00000474706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.871e-9■■■□□ 16.9
PDPK1-210ENST00000474706 SLIT1O75093 1534 aa20.49■□□□□ 0.87
PDPK1-210ENST00000474706 UNC13BO14795 1591 aa20.49■□□□□ 0.87
PDPK1-210ENST00000474706 ARHGAP23Q9P227 1491 aa20.49■□□□□ 0.87
PDPK1-210ENST00000474706 PIK3C2BO00750 1634 aa20.49■□□□□ 0.87
PDPK1-210ENST00000474706 SYNMO15061 1565 aa20.48■□□□□ 0.87
PDPK1-210ENST00000474706 ROCK1Q13464 1354 aa20.47■□□□□ 0.87
PDPK1-210ENST00000474706 TET3O43151 1660 aa20.46■□□□□ 0.87
PDPK1-210ENST00000474706 RPRD2Q5VT52 1461 aaKnown RBP20.46■□□□□ 0.87
PDPK1-210ENST00000474706 NOS1P29475 1434 aa20.45■□□□□ 0.86
PDPK1-210ENST00000474706 SCAF11Q99590 1463 aaKnown RBP20.45■□□□□ 0.86
PDPK1-210ENST00000474706 GCC2Q8IWJ2 1684 aa20.44■□□□□ 0.86
PDPK1-210ENST00000474706 ADGRB3O60242 1522 aa20.42■□□□□ 0.86
PDPK1-210ENST00000474706 IQGAP3Q86VI3 1631 aa20.4■□□□□ 0.86
PDPK1-210ENST00000474706 TMEM2Q9UHN6 1383 aa20.38■□□□□ 0.85
PDPK1-210ENST00000474706 STRCP1A6NGW2 1772 aa20.38■□□□□ 0.85
PDPK1-210ENST00000474706 RRBP1Q9P2E9 1410 aaKnown RBP20.36■□□□□ 0.85
PDPK1-210ENST00000474706 E9PCH4 1651 aa20.35■□□□□ 0.85
PDPK1-210ENST00000474706 UBAP1LF5GYI3 381 aa20.34■□□□□ 0.85
PDPK1-210ENST00000474706 LTKP29376 864 aa20.34■□□□□ 0.85
PDPK1-210ENST00000474706 IDI1Q13907 227 aa20.34■□□□□ 0.85
PDPK1-210ENST00000474706 SLC52A1Q9NWF4 448 aa20.33■□□□□ 0.85
PDPK1-210ENST00000474706 TXNDC2Q86VQ3 553 aa20.32■□□□□ 0.84
PDPK1-210ENST00000474706 PPARGC1BQ86YN6 1023 aaKnown RBP20.32■□□□□ 0.84
PDPK1-210ENST00000474706 EID1Q9Y6B2 187 aa20.32■□□□□ 0.84
PDPK1-210ENST00000474706 STAG3Q9UJ98 1225 aa20.31■□□□□ 0.84
PDPK1-210ENST00000474706 LRRC7Q96NW7 1537 aa20.31■□□□□ 0.84
PDPK1-210ENST00000474706 TMEM131LA2VDJ0 1609 aa20.29■□□□□ 0.84
PDPK1-210ENST00000474706 MYO5BQ9ULV0 1848 aa20.29■□□□□ 0.84
PDPK1-210ENST00000474706 ALKQ9UM73 1620 aa20.28■□□□□ 0.84
PDPK1-210ENST00000474706 ITGAEP38570 1179 aa20.27■□□□□ 0.84
PDPK1-210ENST00000474706 ZFYVE9O95405 1425 aa20.27■□□□□ 0.83
PDPK1-210ENST00000474706 NUP155O75694 1391 aa20.25■□□□□ 0.83
PDPK1-210ENST00000474706 DISP3Q9P2K9 1392 aa20.24■□□□□ 0.83
PDPK1-210ENST00000474706 TOM1O60784 492 aa20.24■□□□□ 0.83
PDPK1-210ENST00000474706 XIRP1Q702N8 1843 aaKnown RBP20.23■□□□□ 0.83
PDPK1-210ENST00000474706 NWD1Q149M9 1564 aa20.23■□□□□ 0.83
PDPK1-210ENST00000474706 SPHKAPQ2M3C7 1700 aa20.22■□□□□ 0.83
PDPK1-210ENST00000474706 NAIPQ13075 1403 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms