RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ATP10AO60312 1499 aa15□□□□□ -0.01
COL8A1-206ENST00000474648 HRCP23327 699 aa14.99□□□□□ -0.01
COL8A1-206ENST00000474648 ANKRD50Q9ULJ7 1429 aa14.99□□□□□ -0.01
COL8A1-206ENST00000474648 PLXNC1O60486 1568 aa14.98□□□□□ -0.01
COL8A1-206ENST00000474648 A2MP01023 1474 aa14.98□□□□□ -0.01
COL8A1-206ENST00000474648 DIP2CQ9Y2E4 1556 aa14.98□□□□□ -0.01
COL8A1-206ENST00000474648 DUOX2Q9NRD8 1548 aa14.97□□□□□ -0.01
COL8A1-206ENST00000474648 RAB3GAP2Q9H2M9 1393 aa14.97□□□□□ -0.01
COL8A1-206ENST00000474648 ABCA6Q8N139 1617 aa14.96□□□□□ -0.01
COL8A1-206ENST00000474648 ADGBQ8N7X0 1667 aa14.96□□□□□ -0.01
COL8A1-206ENST00000474648 ERBINQ96RT1 1412 aa14.94□□□□□ -0.02
COL8A1-206ENST00000474648 KIF3BO15066 747 aa14.94□□□□□ -0.02
COL8A1-206ENST00000474648 SLC4A1APQ9BWU0 796 aaKnown RBP14.94□□□□□ -0.02
COL8A1-206ENST00000474648 ARHGEF40Q8TER5 1519 aa14.93□□□□□ -0.02
COL8A1-206ENST00000474648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.92□□□□□ -0.02
COL8A1-206ENST00000474648 REREQ9P2R6 1566 aa14.91□□□□□ -0.02
COL8A1-206ENST00000474648 AGLP35573 1532 aa14.9□□□□□ -0.02
COL8A1-206ENST00000474648 RNF39Q9H2S5 420 aa14.89□□□□□ -0.03
COL8A1-206ENST00000474648 GCC2Q8IWJ2 1684 aa14.89□□□□□ -0.03
COL8A1-206ENST00000474648 GGT6Q6P531 493 aa14.88□□□□□ -0.03
COL8A1-206ENST00000474648 TRIM52Q96A61 297 aa14.88□□□□□ -0.03
COL8A1-206ENST00000474648 ARID4BQ4LE39 1312 aaPredicted RBP14.87□□□□□ -0.03
COL8A1-206ENST00000474648 ACIN1Q9UKV3 1341 aaKnown RBP14.87□□□□□ -0.03
COL8A1-206ENST00000474648 NUP155O75694 1391 aa14.86□□□□□ -0.03
COL8A1-206ENST00000474648 SIGLEC1Q9BZZ2 1709 aa14.86□□□□□ -0.03
COL8A1-206ENST00000474648 MLECQ14165 292 aa14.85□□□□□ -0.03
COL8A1-206ENST00000474648 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
COL8A1-206ENST00000474648 EIF2AK4Q9P2K8 1649 aaKnown RBP14.84□□□□□ -0.03
COL8A1-206ENST00000474648 MPHOSPH9Q99550 1183 aa14.83□□□□□ -0.04
COL8A1-206ENST00000474648 BCORL1Q5H9F3 1711 aa14.83□□□□□ -0.04
COL8A1-206ENST00000474648 MROH1Q8NDA8 1641 aa14.82□□□□□ -0.04
COL8A1-206ENST00000474648 PZPP20742 1482 aa14.82□□□□□ -0.04
COL8A1-206ENST00000474648 UNC13BO14795 1591 aa14.81□□□□□ -0.04
COL8A1-206ENST00000474648 RNF17Q9BXT8 1623 aaKnown RBP14.81□□□□□ -0.04
COL8A1-206ENST00000474648 WASHC2CQ9Y4E1 1318 aa14.8□□□□□ -0.04
COL8A1-206ENST00000474648 KANK1Q14678 1352 aa14.8□□□□□ -0.04
COL8A1-206ENST00000474648 KDM5DQ9BY66 1539 aa14.8□□□□□ -0.04
COL8A1-206ENST00000474648 VWDEQ8N2E2 1590 aa14.8□□□□□ -0.04
COL8A1-206ENST00000474648 DEPDC5O75140 1603 aa14.8□□□□□ -0.04
COL8A1-206ENST00000474648 DHX57Q6P158 1386 aaKnown RBP14.79□□□□□ -0.04
COL8A1-206ENST00000474648 PRDM15P57071 1507 aaPredicted RBP14.78□□□□□ -0.04
COL8A1-206ENST00000474648 PKD2Q13563 968 aa14.78□□□□□ -0.04
COL8A1-206ENST00000474648 LMTK2Q8IWU2 1503 aa14.76□□□□□ -0.05
COL8A1-206ENST00000474648 FAM135AQ9P2D6 1515 aa14.76□□□□□ -0.05
COL8A1-206ENST00000474648 ABCC3O15438 1527 aa14.76□□□□□ -0.05
COL8A1-206ENST00000474648 IQGAP3Q86VI3 1631 aa14.74□□□□□ -0.05
COL8A1-206ENST00000474648 ESF1Q9H501 851 aaKnown RBP14.73□□□□□ -0.05
COL8A1-206ENST00000474648 ZMYM3Q14202 1370 aa14.73□□□□□ -0.05
COL8A1-206ENST00000474648 ARHGAP31Q2M1Z3 1444 aa14.72□□□□□ -0.05
COL8A1-206ENST00000474648 CNTLNQ9NXG0 1405 aa14.71□□□□□ -0.05
COL8A1-206ENST00000474648 NPATQ14207 1427 aa14.7□□□□□ -0.06
COL8A1-206ENST00000474648 KDM4FA0A1W2PPD8 638 aa14.7□□□□□ -0.06
COL8A1-206ENST00000474648 FBXO31Q5XUX0 539 aaPredicted RBP14.7□□□□□ -0.06
COL8A1-206ENST00000474648 CCER1Q8TC90 406 aaPredicted RBP14.7□□□□□ -0.06
COL8A1-206ENST00000474648 ANKRD30BQ9BXX2 1392 aa14.7□□□□□ -0.06
COL8A1-206ENST00000474648 PLA2R1Q13018 1463 aa14.69□□□□□ -0.06
COL8A1-206ENST00000474648 CEBPAP49715 358 aaPredicted RBP14.69□□□□□ -0.06
COL8A1-206ENST00000474648 U3KPZ7 1027 aaPredicted RBP14.69□□□□□ -0.06
COL8A1-206ENST00000474648 ADAMTSL3P82987 1691 aa14.68□□□□□ -0.06
COL8A1-206ENST00000474648 TET3O43151 1660 aa14.68□□□□□ -0.06
COL8A1-206ENST00000474648 PTPRTO14522 1441 aa14.67□□□□□ -0.06
COL8A1-206ENST00000474648 EFCAB6Q5THR3 1501 aa14.67□□□□□ -0.06
COL8A1-206ENST00000474648 RPRD2Q5VT52 1461 aaKnown RBP14.66□□□□□ -0.06
COL8A1-206ENST00000474648 C1QBPQ07021 282 aaKnown RBP14.66□□□□□ -0.06
COL8A1-206ENST00000474648 CEP152O94986 1710 aa14.66□□□□□ -0.06
COL8A1-206ENST00000474648 NOS1P29475 1434 aa14.66□□□□□ -0.06
COL8A1-206ENST00000474648 CLTCQ00610 1675 aaKnown RBP14.65□□□□□ -0.06
COL8A1-206ENST00000474648 ZC3H13Q5T200 1668 aaKnown RBP14.65□□□□□ -0.06
COL8A1-206ENST00000474648 CACNB1Q02641 598 aaPredicted RBP14.65□□□□□ -0.06
COL8A1-206ENST00000474648 SIN3AQ96ST3 1273 aa14.65□□□□□ -0.06
COL8A1-206ENST00000474648 CLSPNQ9HAW4 1339 aa14.65□□□□□ -0.06
COL8A1-206ENST00000474648 E9PCH4 1651 aa14.65□□□□□ -0.06
COL8A1-206ENST00000474648 CAMSAP1Q5T5Y3 1602 aa14.64□□□□□ -0.07
COL8A1-206ENST00000474648 MADDQ8WXG6 1647 aa14.64□□□□□ -0.07
COL8A1-206ENST00000474648 ERVK-7P63135 1459 aa14.62□□□□□ -0.07
COL8A1-206ENST00000474648 IDI1Q13907 227 aa14.61□□□□□ -0.07
COL8A1-206ENST00000474648 PTPRMP28827 1452 aa14.61□□□□□ -0.07
COL8A1-206ENST00000474648 MROH2AA6NES4 1674 aa14.6□□□□□ -0.07
COL8A1-206ENST00000474648 FER1L4A9Z1Z3 1794 aa14.6□□□□□ -0.07
COL8A1-206ENST00000474648 NEUROD1Q13562 356 aa14.59□□□□□ -0.07
COL8A1-206ENST00000474648 SLC52A1Q9NWF4 448 aa14.59□□□□□ -0.07
COL8A1-206ENST00000474648 SPATA31D1Q6ZQQ2 1576 aa14.59□□□□□ -0.07
COL8A1-206ENST00000474648 TNRQ92752 1358 aa14.59□□□□□ -0.07
COL8A1-206ENST00000474648 RIMS1Q86UR5 1692 aaKnown RBP14.58□□□□□ -0.08
COL8A1-206ENST00000474648 TRPM2O94759 1503 aa14.57□□□□□ -0.08
COL8A1-206ENST00000474648 CCDC144AA2RUR9 1427 aa14.57□□□□□ -0.08
COL8A1-206ENST00000474648 SYNMO15061 1565 aa14.56□□□□□ -0.08
COL8A1-206ENST00000474648 C3P01024 1663 aa14.56□□□□□ -0.08
COL8A1-206ENST00000474648 UGGT1Q9NYU2 1555 aa14.55□□□□□ -0.08
COL8A1-206ENST00000474648 PREX1Q8TCU6 1659 aa14.55□□□□□ -0.08
COL8A1-206ENST00000474648 CFAP65Q6ZU64 1925 aaKnown RBP14.53□□□□□ -0.08
COL8A1-206ENST00000474648 SPHKAPQ2M3C7 1700 aa14.52□□□□□ -0.08
COL8A1-206ENST00000474648 SPATA31E1Q6ZUB1 1445 aa14.52□□□□□ -0.08
COL8A1-206ENST00000474648 ZBTB22O15209 634 aa14.52□□□□□ -0.09
COL8A1-206ENST00000474648 FOXD4L1Q9NU39 408 aa14.52□□□□□ -0.09
COL8A1-206ENST00000474648 CLTCL1P53675 1640 aa14.52□□□□□ -0.09
COL8A1-206ENST00000474648 CHGAP10645 457 aaKnown RBP14.51□□□□□ -0.09
COL8A1-206ENST00000474648 RGL3Q3MIN7 710 aa14.51□□□□□ -0.09
COL8A1-206ENST00000474648 PIK3C2BO00750 1634 aa14.51□□□□□ -0.09
COL8A1-206ENST00000474648 L3MBTL2Q969R5 705 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms