RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 CAMSAP2Q08AD1 1489 aa19.9■□□□□ 0.78
NELFCD-204ENST00000474543 PRKRIP1Q9H875 184 aaPredicted RBP19.89■□□□□ 0.77
NELFCD-204ENST00000474543 POLR1AO95602 1720 aaPredicted RBP19.87■□□□□ 0.77
NELFCD-204ENST00000474543 ZMYM4Q5VZL5 1548 aa19.87■□□□□ 0.77
NELFCD-204ENST00000474543 SPATA31E1Q6ZUB1 1445 aa19.86■□□□□ 0.77
NELFCD-204ENST00000474543 IRX6P78412 446 aaPredicted RBP19.85■□□□□ 0.77
NELFCD-204ENST00000474543 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
NELFCD-204ENST00000474543 KDM5CP41229 1560 aa19.85■□□□□ 0.77
NELFCD-204ENST00000474543 MBD5Q9P267 1494 aa19.84■□□□□ 0.77
NELFCD-204ENST00000474543 MAGI2Q86UL8 1455 aa19.84■□□□□ 0.77
NELFCD-204ENST00000474543 RSPH4AQ5TD94 716 aa19.83■□□□□ 0.77
NELFCD-204ENST00000474543 SPAG9O60271 1321 aaKnown RBP19.83■□□□□ 0.77
NELFCD-204ENST00000474543 ZFYVE16Q7Z3T8 1539 aa19.82■□□□□ 0.76
NELFCD-204ENST00000474543 YEATS2Q9ULM3 1422 aa19.82■□□□□ 0.76
NELFCD-204ENST00000474543 HECW2Q9P2P5 1572 aa19.82■□□□□ 0.76
NELFCD-204ENST00000474543 KIF7Q2M1P5 1343 aa19.81■□□□□ 0.76
NELFCD-204ENST00000474543 CCDC141Q6ZP82 1450 aa19.81■□□□□ 0.76
NELFCD-204ENST00000474543 ERICH6BQ5W0A0 696 aa19.81■□□□□ 0.76
NELFCD-204ENST00000474543 MLH3Q9UHC1 1453 aa19.81■□□□□ 0.76
NELFCD-204ENST00000474543 MRS2Q9HD23 443 aa19.8■□□□□ 0.76
NELFCD-204ENST00000474543 PZPP20742 1482 aa19.8■□□□□ 0.76
NELFCD-204ENST00000474543 ARHGEF40Q8TER5 1519 aa19.8■□□□□ 0.76
NELFCD-204ENST00000474543 TSPY4P0CV99 314 aa19.8■□□□□ 0.76
NELFCD-204ENST00000474543 TSPY10P0CW01 314 aa19.8■□□□□ 0.76
NELFCD-204ENST00000474543 FAM9BQ8IZU0 186 aa19.8■□□□□ 0.76
NELFCD-204ENST00000474543 ARHGEF5Q12774 1597 aa19.79■□□□□ 0.76
NELFCD-204ENST00000474543 ADGBQ8N7X0 1667 aa19.77■□□□□ 0.76
NELFCD-204ENST00000474543 ZBED9Q6R2W3 1325 aa19.77■□□□□ 0.76
NELFCD-204ENST00000474543 KIDINS220Q9ULH0 1771 aa19.76■□□□□ 0.75
NELFCD-204ENST00000474543 ARID4BQ4LE39 1312 aaPredicted RBP19.75■□□□□ 0.75
NELFCD-204ENST00000474543 ATP10AO60312 1499 aa19.75■□□□□ 0.75
NELFCD-204ENST00000474543 ATP7AQ04656 1500 aa19.75■□□□□ 0.75
NELFCD-204ENST00000474543 PPP4R2Q9NY27 417 aa19.74■□□□□ 0.75
NELFCD-204ENST00000474543 ABCA6Q8N139 1617 aa19.73■□□□□ 0.75
NELFCD-204ENST00000474543 INO80Q9ULG1 1556 aaPredicted RBP19.73■□□□□ 0.75
NELFCD-204ENST00000474543 DIP2CQ9Y2E4 1556 aa19.73■□□□□ 0.75
NELFCD-204ENST00000474543 RTEL1-TNFRSF6BF6WH68 1400 aa19.72■□□□□ 0.75
NELFCD-204ENST00000474543 C9orf84Q5VXU9 1444 aa19.72■□□□□ 0.75
NELFCD-204ENST00000474543 CROCC2H7BZ55 1655 aa19.72■□□□□ 0.75
NELFCD-204ENST00000474543 ADGRL2O95490 1459 aa19.71■□□□□ 0.75
NELFCD-204ENST00000474543 MSH5O43196 834 aa19.7■□□□□ 0.74
NELFCD-204ENST00000474543 BCORL1Q5H9F3 1711 aa19.69■□□□□ 0.74
NELFCD-204ENST00000474543 FANCIQ9NVI1 1328 aa19.68■□□□□ 0.74
NELFCD-204ENST00000474543 DHX29Q7Z478 1369 aaKnown RBP19.68■□□□□ 0.74
NELFCD-204ENST00000474543 MAST1Q9Y2H9 1570 aa19.67■□□□□ 0.74
NELFCD-204ENST00000474543 USP47Q96K76 1375 aa19.66■□□□□ 0.74
NELFCD-204ENST00000474543 SHANK2Q9UPX8 1470 aa19.66■□□□□ 0.74
NELFCD-204ENST00000474543 PKD2Q13563 968 aa19.66■□□□□ 0.74
NELFCD-204ENST00000474543 A2MP01023 1474 aa19.65■□□□□ 0.74
NELFCD-204ENST00000474543 SIGLEC1Q9BZZ2 1709 aa19.65■□□□□ 0.74
NELFCD-204ENST00000474543 MLECQ14165 292 aa19.65■□□□□ 0.74
NELFCD-204ENST00000474543 ANKRD30AQ9BXX3 1397 aa19.65■□□□□ 0.74
NELFCD-204ENST00000474543 REREQ9P2R6 1566 aa19.64■□□□□ 0.73
NELFCD-204ENST00000474543 ANKRD50Q9ULJ7 1429 aa19.62■□□□□ 0.73
NELFCD-204ENST00000474543 ZNF326Q5BKZ1 582 aaKnown RBP19.61■□□□□ 0.73
NELFCD-204ENST00000474543 KDM4FA0A1W2PPD8 638 aa19.61■□□□□ 0.73
NELFCD-204ENST00000474543 B4GALNT3Q6L9W6 998 aa19.6■□□□□ 0.73
NELFCD-204ENST00000474543 PLXNC1O60486 1568 aa19.6■□□□□ 0.73
NELFCD-204ENST00000474543 KIF15Q9NS87 1388 aa19.59■□□□□ 0.73
NELFCD-204ENST00000474543 UHRF1BP1Q6BDS2 1440 aa19.59■□□□□ 0.73
NELFCD-204ENST00000474543 AGLP35573 1532 aa19.59■□□□□ 0.73
NELFCD-204ENST00000474543 SMG6Q86US8 1419 aaKnown RBP19.59■□□□□ 0.73
NELFCD-204ENST00000474543 POLR3GLQ9BT43 218 aa19.58■□□□□ 0.72
NELFCD-204ENST00000474543 RALGAPBQ86X10 1494 aa19.57■□□□□ 0.72
NELFCD-204ENST00000474543 KIF3BO15066 747 aa19.56■□□□□ 0.72
NELFCD-204ENST00000474543 DUOX2Q9NRD8 1548 aa19.56■□□□□ 0.72
NELFCD-204ENST00000474543 CNGB1Q14028 1251 aaPredicted RBP19.55■□□□□ 0.72
NELFCD-204ENST00000474543 GGT6Q6P531 493 aa19.55■□□□□ 0.72
NELFCD-204ENST00000474543 NUP155O75694 1391 aa19.55■□□□□ 0.72
NELFCD-204ENST00000474543 ADAMTSL3P82987 1691 aa19.54■□□□□ 0.72
NELFCD-204ENST00000474543 ROCK2O75116 1388 aaKnown RBP19.53■□□□□ 0.72
NELFCD-204ENST00000474543 NUDCQ9Y266 331 aa19.52■□□□□ 0.72
NELFCD-204ENST00000474543 KDM5DQ9BY66 1539 aa19.52■□□□□ 0.72
NELFCD-204ENST00000474543 ESF1Q9H501 851 aaKnown RBP19.52■□□□□ 0.72
NELFCD-204ENST00000474543 MADDQ8WXG6 1647 aa19.51■□□□□ 0.71
NELFCD-204ENST00000474543 RNF123Q5XPI4 1314 aa19.51■□□□□ 0.71
NELFCD-204ENST00000474543 PNISRQ8TF01 805 aaKnown RBP19.51■□□□□ 0.71
NELFCD-204ENST00000474543 CARD11Q9BXL7 1154 aa19.51■□□□□ 0.71
NELFCD-204ENST00000474543 FER1L4A9Z1Z3 1794 aa19.5■□□□□ 0.71
NELFCD-204ENST00000474543 ERBINQ96RT1 1412 aa19.49■□□□□ 0.71
NELFCD-204ENST00000474543 AEBP2Q6ZN18 517 aaPredicted RBP19.48■□□□□ 0.71
NELFCD-204ENST00000474543 EIF2AK4Q9P2K8 1649 aaKnown RBP19.47■□□□□ 0.71
NELFCD-204ENST00000474543 RIMS1Q86UR5 1692 aaKnown RBP19.47■□□□□ 0.71
NELFCD-204ENST00000474543 PLPPR3Q6T4P5 718 aa19.47■□□□□ 0.71
NELFCD-204ENST00000474543 TMC1Q8TDI8 760 aa19.46■□□□□ 0.71
NELFCD-204ENST00000474543 ERICH6Q7L0X2 663 aa19.46■□□□□ 0.71
NELFCD-204ENST00000474543 ST20-MTHFSA0A0A6YYL1 179 aa19.45■□□□□ 0.7
NELFCD-204ENST00000474543 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
NELFCD-204ENST00000474543 KDM2AQ9Y2K7 1162 aa19.45■□□□□ 0.7
NELFCD-204ENST00000474543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.44■□□□□ 0.71e-7■■□□□ 11.4
NELFCD-204ENST00000474543 PTPRMP28827 1452 aa19.44■□□□□ 0.7
NELFCD-204ENST00000474543 DCAF11Q8TEB1 546 aa19.43■□□□□ 0.7
NELFCD-204ENST00000474543 E9PCH4 1651 aa19.43■□□□□ 0.7
NELFCD-204ENST00000474543 LRPPRCP42704 1394 aaKnown RBP19.42■□□□□ 0.7
NELFCD-204ENST00000474543 WASHC2CQ9Y4E1 1318 aa19.42■□□□□ 0.7
NELFCD-204ENST00000474543 RNF17Q9BXT8 1623 aaKnown RBP19.42■□□□□ 0.7
NELFCD-204ENST00000474543 KTN1Q86UP2 1357 aaKnown RBP19.41■□□□□ 0.7
NELFCD-204ENST00000474543 BRD4O60885 1362 aaPredicted RBP19.4■□□□□ 0.7
NELFCD-204ENST00000474543 CLTCQ00610 1675 aaKnown RBP19.4■□□□□ 0.7
NELFCD-204ENST00000474543 SENP3-EIF4A1A0A087X0R7 540 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms