RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 KDM5DQ9BY66 1539 aa24.72■■□□□ 1.55
CDPF1-205ENST00000474256 CAMSAP1Q5T5Y3 1602 aa24.7■■□□□ 1.54
CDPF1-205ENST00000474256 MYO3AQ8NEV4 1616 aa24.7■■□□□ 1.54
CDPF1-205ENST00000474256 FBXO31Q5XUX0 539 aaPredicted RBP24.69■■□□□ 1.54
CDPF1-205ENST00000474256 PZPP20742 1482 aa24.69■■□□□ 1.54
CDPF1-205ENST00000474256 ABCC5O15440 1437 aa24.69■■□□□ 1.54
CDPF1-205ENST00000474256 CEP170BQ9Y4F5 1589 aaPredicted RBP24.68■■□□□ 1.54
CDPF1-205ENST00000474256 FGD6Q6ZV73 1430 aa24.68■■□□□ 1.54
CDPF1-205ENST00000474256 ZNF142P52746 1687 aaPredicted RBP24.67■■□□□ 1.54
CDPF1-205ENST00000474256 PLA2R1Q13018 1463 aa24.66■■□□□ 1.54
CDPF1-205ENST00000474256 TCOF1Q13428 1488 aaKnown RBP24.66■■□□□ 1.54
CDPF1-205ENST00000474256 SHANK2Q9UPX8 1470 aa24.66■■□□□ 1.54
CDPF1-205ENST00000474256 PTPN23Q9H3S7 1636 aa24.66■■□□□ 1.54
CDPF1-205ENST00000474256 TNRQ92752 1358 aa24.65■■□□□ 1.54
CDPF1-205ENST00000474256 RNF17Q9BXT8 1623 aaKnown RBP24.64■■□□□ 1.54
CDPF1-205ENST00000474256 A2ML1A8K2U0 1454 aa24.64■■□□□ 1.54
CDPF1-205ENST00000474256 NCKAP5LQ9HCH0 1330 aa24.64■■□□□ 1.54
CDPF1-205ENST00000474256 DUOX2Q9NRD8 1548 aa24.63■■□□□ 1.53
CDPF1-205ENST00000474256 PKD2Q13563 968 aa24.63■■□□□ 1.53
CDPF1-205ENST00000474256 DAPK1P53355 1430 aa24.62■■□□□ 1.53
CDPF1-205ENST00000474256 EIF2AK4Q9P2K8 1649 aaKnown RBP24.62■■□□□ 1.53
CDPF1-205ENST00000474256 KIF15Q9NS87 1388 aa24.61■■□□□ 1.53
CDPF1-205ENST00000474256 ABCC3O15438 1527 aa24.6■■□□□ 1.53
CDPF1-205ENST00000474256 RRP7BPQ9NSQ0 103 aa24.59■■□□□ 1.53
CDPF1-205ENST00000474256 DNMT1P26358 1616 aaKnown RBP24.57■■□□□ 1.52
CDPF1-205ENST00000474256 MROH1Q8NDA8 1641 aa24.57■■□□□ 1.52
CDPF1-205ENST00000474256 CROCC2H7BZ55 1655 aa24.57■■□□□ 1.52
CDPF1-205ENST00000474256 ERBINQ96RT1 1412 aa24.57■■□□□ 1.52
CDPF1-205ENST00000474256 LTBP4Q8N2S1 1624 aa24.57■■□□□ 1.52
CDPF1-205ENST00000474256 NLRP1Q9C000 1473 aa24.55■■□□□ 1.52
CDPF1-205ENST00000474256 ZC3H13Q5T200 1668 aaKnown RBP24.54■■□□□ 1.52
CDPF1-205ENST00000474256 CHIC2Q9UKJ5 165 aa24.52■■□□□ 1.52
CDPF1-205ENST00000474256 ANKRD30AQ9BXX3 1397 aa24.52■■□□□ 1.52
CDPF1-205ENST00000474256 SPATA31D1Q6ZQQ2 1576 aa24.5■■□□□ 1.51
CDPF1-205ENST00000474256 THEMISQ8N1K5 641 aaPredicted RBP24.5■■□□□ 1.51
CDPF1-205ENST00000474256 PRDM15P57071 1507 aaPredicted RBP24.5■■□□□ 1.51
CDPF1-205ENST00000474256 ZNF335Q9H4Z2 1342 aaPredicted RBP24.49■■□□□ 1.51
CDPF1-205ENST00000474256 ERVK-7P63135 1459 aa24.49■■□□□ 1.51
CDPF1-205ENST00000474256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.48■■□□□ 1.51
CDPF1-205ENST00000474256 ARHGAP31Q2M1Z3 1444 aa24.47■■□□□ 1.51
CDPF1-205ENST00000474256 FAM50AQ14320 339 aaKnown RBP24.47■■□□□ 1.51
CDPF1-205ENST00000474256 UGGT1Q9NYU2 1555 aa24.46■■□□□ 1.51
CDPF1-205ENST00000474256 IQSEC2Q5JU85 1478 aa24.46■■□□□ 1.51
CDPF1-205ENST00000474256 ADGRL2O95490 1459 aa24.45■■□□□ 1.51
CDPF1-205ENST00000474256 ANKLE2Q86XL3 938 aa24.45■■□□□ 1.5
CDPF1-205ENST00000474256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.44■■□□□ 1.5
CDPF1-205ENST00000474256 DEPDC5O75140 1603 aa24.43■■□□□ 1.5
CDPF1-205ENST00000474256 CEP152O94986 1710 aa24.43■■□□□ 1.5
CDPF1-205ENST00000474256 NEURL4Q96JN8 1562 aa24.42■■□□□ 1.5
CDPF1-205ENST00000474256 KANK1Q14678 1352 aa24.42■■□□□ 1.5
CDPF1-205ENST00000474256 MED14O60244 1454 aa24.38■■□□□ 1.49
CDPF1-205ENST00000474256 LMTK2Q8IWU2 1503 aa24.38■■□□□ 1.49
CDPF1-205ENST00000474256 VWDEQ8N2E2 1590 aa24.37■■□□□ 1.49
CDPF1-205ENST00000474256 POLR1AO95602 1720 aaPredicted RBP24.37■■□□□ 1.49
CDPF1-205ENST00000474256 NPHP4O75161 1426 aaPredicted RBP24.35■■□□□ 1.49
CDPF1-205ENST00000474256 ANKRD50Q9ULJ7 1429 aa24.35■■□□□ 1.49
CDPF1-205ENST00000474256 UBR1Q8IWV7 1749 aa24.29■■□□□ 1.48
CDPF1-205ENST00000474256 ARHGAP23Q9P227 1491 aa24.28■■□□□ 1.48
CDPF1-205ENST00000474256 CPS1P31327 1500 aa24.28■■□□□ 1.48
CDPF1-205ENST00000474256 ROCK1Q13464 1354 aa24.28■■□□□ 1.48
CDPF1-205ENST00000474256 PPARGC1BQ86YN6 1023 aaKnown RBP24.27■■□□□ 1.48
CDPF1-205ENST00000474256 CFAP65Q6ZU64 1925 aaKnown RBP24.27■■□□□ 1.48
CDPF1-205ENST00000474256 NOS1P29475 1434 aa24.27■■□□□ 1.48
CDPF1-205ENST00000474256 SLIT1O75093 1534 aa24.26■■□□□ 1.47
CDPF1-205ENST00000474256 EFCAB6Q5THR3 1501 aa24.26■■□□□ 1.47
CDPF1-205ENST00000474256 LTKP29376 864 aa24.26■■□□□ 1.47
CDPF1-205ENST00000474256 IDI1Q13907 227 aa24.26■■□□□ 1.47
CDPF1-205ENST00000474256 UBAP1LF5GYI3 381 aa24.25■■□□□ 1.47
CDPF1-205ENST00000474256 SCAF11Q99590 1463 aaKnown RBP24.25■■□□□ 1.47
CDPF1-205ENST00000474256 IQGAP1P46940 1657 aa24.24■■□□□ 1.47
CDPF1-205ENST00000474256 TXNDC2Q86VQ3 553 aa24.24■■□□□ 1.47
CDPF1-205ENST00000474256 TMEM2Q9UHN6 1383 aa24.22■■□□□ 1.47
CDPF1-205ENST00000474256 PIK3C2BO00750 1634 aa24.21■■□□□ 1.47
CDPF1-205ENST00000474256 SYNMO15061 1565 aa24.21■■□□□ 1.47
CDPF1-205ENST00000474256 RPRD2Q5VT52 1461 aaKnown RBP24.21■■□□□ 1.47
CDPF1-205ENST00000474256 STAG3Q9UJ98 1225 aa24.21■■□□□ 1.47
CDPF1-205ENST00000474256 EID1Q9Y6B2 187 aa24.21■■□□□ 1.47
CDPF1-205ENST00000474256 SLC52A1Q9NWF4 448 aa24.2■■□□□ 1.46
CDPF1-205ENST00000474256 ITGAEP38570 1179 aa24.17■■□□□ 1.46
CDPF1-205ENST00000474256 KDM5AP29375 1690 aaKnown RBP24.17■■□□□ 1.46
CDPF1-205ENST00000474256 UNC13BO14795 1591 aa24.16■■□□□ 1.46
CDPF1-205ENST00000474256 TET3O43151 1660 aa24.14■■□□□ 1.45
CDPF1-205ENST00000474256 TOM1O60784 492 aa24.13■■□□□ 1.45
CDPF1-205ENST00000474256 RRBP1Q9P2E9 1410 aaKnown RBP24.11■■□□□ 1.45
CDPF1-205ENST00000474256 ADGRB3O60242 1522 aa24.11■■□□□ 1.45
CDPF1-205ENST00000474256 LRRC7Q96NW7 1537 aa24.11■■□□□ 1.45
CDPF1-205ENST00000474256 STRCP1A6NGW2 1772 aa24.09■■□□□ 1.45
CDPF1-205ENST00000474256 NUP155O75694 1391 aa24.09■■□□□ 1.45
CDPF1-205ENST00000474256 GCC2Q8IWJ2 1684 aa24.07■■□□□ 1.44
CDPF1-205ENST00000474256 IQGAP3Q86VI3 1631 aa24.06■■□□□ 1.44
CDPF1-205ENST00000474256 PIP4K2BP78356 416 aa24.06■■□□□ 1.44
CDPF1-205ENST00000474256 SCAF1Q9H7N4 1312 aaKnown RBP24.04■■□□□ 1.44
CDPF1-205ENST00000474256 DISP3Q9P2K9 1392 aa24.03■■□□□ 1.44
CDPF1-205ENST00000474256 ALKQ9UM73 1620 aa24.03■■□□□ 1.44
CDPF1-205ENST00000474256 ZFYVE9O95405 1425 aa24.03■■□□□ 1.44
CDPF1-205ENST00000474256 E9PCH4 1651 aa24.03■■□□□ 1.44
CDPF1-205ENST00000474256 SLC26A8Q96RN1 970 aa24.02■■□□□ 1.44
CDPF1-205ENST00000474256 KCNA6P17658 529 aa24■■□□□ 1.43
CDPF1-205ENST00000474256 HSPA1LP34931 641 aa24■■□□□ 1.43
CDPF1-205ENST00000474256 HDGFP51858 240 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms