RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 PKD2Q13563 968 aa39.24■■■■□ 3.87
PKD1-211ENST00000474088 PLA2R1Q13018 1463 aa39.24■■■■□ 3.87
PKD1-211ENST00000474088 WASHC2CQ9Y4E1 1318 aa39.2■■■■□ 3.87
PKD1-211ENST00000474088 FBXO31Q5XUX0 539 aaPredicted RBP39.18■■■■□ 3.86
PKD1-211ENST00000474088 KDM5DQ9BY66 1539 aa39.18■■■■□ 3.86
PKD1-211ENST00000474088 FAM135AQ9P2D6 1515 aa39.18■■■■□ 3.86
PKD1-211ENST00000474088 A2ML1A8K2U0 1454 aa39.17■■■■□ 3.86
PKD1-211ENST00000474088 TCOF1Q13428 1488 aaKnown RBP39.17■■■■□ 3.86
PKD1-211ENST00000474088 PZPP20742 1482 aa39.13■■■■□ 3.85
PKD1-211ENST00000474088 TNRQ92752 1358 aa39.13■■■■□ 3.85
PKD1-211ENST00000474088 MIA2Q96PC5 1412 aa39.13■■■■□ 3.85
PKD1-211ENST00000474088 MYOM3Q5VTT5 1437 aa39.12■■■■□ 3.85
PKD1-211ENST00000474088 IQSEC2Q5JU85 1478 aa39.11■■■■□ 3.85
PKD1-211ENST00000474088 DNMT1P26358 1616 aaKnown RBP39.11■■■■□ 3.85
PKD1-211ENST00000474088 MAST1Q9Y2H9 1570 aa39.1■■■■□ 3.85
PKD1-211ENST00000474088 ZNF335Q9H4Z2 1342 aaPredicted RBP39.1■■■■□ 3.85
PKD1-211ENST00000474088 APLP2Q06481 763 aa38.99■■■■□ 3.83
PKD1-211ENST00000474088 RNF17Q9BXT8 1623 aaKnown RBP38.98■■■■□ 3.83
PKD1-211ENST00000474088 NLRP1Q9C000 1473 aa38.94■■■■□ 3.82
PKD1-211ENST00000474088 EIF2AK4Q9P2K8 1649 aaKnown RBP38.94■■■■□ 3.82
PKD1-211ENST00000474088 THEMISQ8N1K5 641 aaPredicted RBP38.94■■■■□ 3.82
PKD1-211ENST00000474088 ABCC3O15438 1527 aa38.92■■■■□ 3.82
PKD1-211ENST00000474088 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.91■■■■□ 3.82
PKD1-211ENST00000474088 ANKLE2Q86XL3 938 aa38.9■■■■□ 3.82
PKD1-211ENST00000474088 ZC3H13Q5T200 1668 aaKnown RBP38.89■■■■□ 3.82
PKD1-211ENST00000474088 DUOX2Q9NRD8 1548 aa38.89■■■■□ 3.82
PKD1-211ENST00000474088 UGGT1Q9NYU2 1555 aa38.87■■■■□ 3.81
PKD1-211ENST00000474088 POLR1AO95602 1720 aaPredicted RBP38.87■■■■□ 3.81
PKD1-211ENST00000474088 NEURL4Q96JN8 1562 aa38.87■■■■□ 3.81
PKD1-211ENST00000474088 MROH1Q8NDA8 1641 aa38.85■■■■□ 3.81
PKD1-211ENST00000474088 UBAP1LF5GYI3 381 aa38.85■■■■□ 3.81
PKD1-211ENST00000474088 ABCC5O15440 1437 aa38.85■■■■□ 3.81
PKD1-211ENST00000474088 SPATA31D1Q6ZQQ2 1576 aa38.83■■■■□ 3.81
PKD1-211ENST00000474088 PTPN23Q9H3S7 1636 aa38.83■■■■□ 3.81
PKD1-211ENST00000474088 SHANK2Q9UPX8 1470 aa38.81■■■■□ 3.8
PKD1-211ENST00000474088 KIF15Q9NS87 1388 aa38.81■■■■□ 3.8
PKD1-211ENST00000474088 RRP7BPQ9NSQ0 103 aa38.8■■■■□ 3.8
PKD1-211ENST00000474088 DISP3Q9P2K9 1392 aa38.79■■■■□ 3.8
PKD1-211ENST00000474088 ERVK-7P63135 1459 aa38.79■■■■□ 3.8
PKD1-211ENST00000474088 CROCC2H7BZ55 1655 aa38.77■■■■□ 3.8
PKD1-211ENST00000474088 DAPK1P53355 1430 aa38.76■■■■□ 3.8
PKD1-211ENST00000474088 FGD6Q6ZV73 1430 aa38.76■■■■□ 3.8
PKD1-211ENST00000474088 CEP152O94986 1710 aa38.75■■■■□ 3.79
PKD1-211ENST00000474088 MED14O60244 1454 aa38.75■■■■□ 3.79
PKD1-211ENST00000474088 NPHP4O75161 1426 aaPredicted RBP38.74■■■■□ 3.79
PKD1-211ENST00000474088 ERBINQ96RT1 1412 aa38.74■■■■□ 3.79
PKD1-211ENST00000474088 DEPDC5O75140 1603 aa38.74■■■■□ 3.79
PKD1-211ENST00000474088 CPS1P31327 1500 aa38.72■■■■□ 3.79
PKD1-211ENST00000474088 PRDM15P57071 1507 aaPredicted RBP38.68■■■■□ 3.78
PKD1-211ENST00000474088 ARHGAP31Q2M1Z3 1444 aa38.67■■■■□ 3.78
PKD1-211ENST00000474088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.67■■■■□ 3.78
PKD1-211ENST00000474088 VWDEQ8N2E2 1590 aa38.65■■■■□ 3.78
PKD1-211ENST00000474088 CHIC2Q9UKJ5 165 aa38.65■■■■□ 3.78
PKD1-211ENST00000474088 CFAP65Q6ZU64 1925 aaKnown RBP38.64■■■■□ 3.78
PKD1-211ENST00000474088 ANKRD30AQ9BXX3 1397 aa38.63■■■■□ 3.77
PKD1-211ENST00000474088 ILDR2Q71H61 639 aa38.61■■■■□ 3.77
PKD1-211ENST00000474088 IQGAP1P46940 1657 aa38.61■■■■□ 3.77
PKD1-211ENST00000474088 KANK1Q14678 1352 aa38.59■■■■□ 3.77
PKD1-211ENST00000474088 TOM1O60784 492 aa38.59■■■■□ 3.77
PKD1-211ENST00000474088 UBR1Q8IWV7 1749 aa38.58■■■■□ 3.77
PKD1-211ENST00000474088 PIP4K2BP78356 416 aa38.52■■■■□ 3.76
PKD1-211ENST00000474088 SCAF1Q9H7N4 1312 aaKnown RBP38.52■■■■□ 3.76
PKD1-211ENST00000474088 SCAF11Q99590 1463 aaKnown RBP38.5■■■■□ 3.75
PKD1-211ENST00000474088 LTKP29376 864 aa38.5■■■■□ 3.75
PKD1-211ENST00000474088 TXNDC2Q86VQ3 553 aa38.5■■■■□ 3.75
PKD1-211ENST00000474088 ARHGAP23Q9P227 1491 aa38.49■■■■□ 3.75
PKD1-211ENST00000474088 SLIT1O75093 1534 aa38.48■■■■□ 3.75
PKD1-211ENST00000474088 FAM50AQ14320 339 aaKnown RBP38.48■■■■□ 3.75
PKD1-211ENST00000474088 LMTK2Q8IWU2 1503 aa38.48■■■■□ 3.75
PKD1-211ENST00000474088 ADGRL2O95490 1459 aa38.46■■■■□ 3.75
PKD1-211ENST00000474088 HSPA1LP34931 641 aa38.44■■■■□ 3.74
PKD1-211ENST00000474088 EID1Q9Y6B2 187 aa38.43■■■■□ 3.74
PKD1-211ENST00000474088 STRCP1A6NGW2 1772 aa38.43■■■■□ 3.74
PKD1-211ENST00000474088 PIK3C2BO00750 1634 aa38.42■■■■□ 3.74
PKD1-211ENST00000474088 STAG3Q9UJ98 1225 aa38.42■■■■□ 3.74
PKD1-211ENST00000474088 IDI1Q13907 227 aa38.41■■■■□ 3.74
PKD1-211ENST00000474088 LRRC7Q96NW7 1537 aa38.41■■■■□ 3.74
PKD1-211ENST00000474088 TMEM2Q9UHN6 1383 aa38.39■■■■□ 3.74
PKD1-211ENST00000474088 SOCS7O14512 581 aa38.37■■■■□ 3.73
PKD1-211ENST00000474088 ALKQ9UM73 1620 aa38.35■■■■□ 3.73
PKD1-211ENST00000474088 ANKRD50Q9ULJ7 1429 aa38.34■■■■□ 3.73
PKD1-211ENST00000474088 SYNMO15061 1565 aa38.33■■■■□ 3.73
PKD1-211ENST00000474088 NOS1P29475 1434 aa38.33■■■■□ 3.73
PKD1-211ENST00000474088 EFCAB6Q5THR3 1501 aa38.33■■■■□ 3.73
PKD1-211ENST00000474088 KDM5AP29375 1690 aaKnown RBP38.31■■■■□ 3.72
PKD1-211ENST00000474088 SLC52A1Q9NWF4 448 aa38.27■■■■□ 3.72
PKD1-211ENST00000474088 RPRD2Q5VT52 1461 aaKnown RBP38.22■■■■□ 3.71
PKD1-211ENST00000474088 ADGRB3O60242 1522 aa38.18■■■■□ 3.7
PKD1-211ENST00000474088 TET3O43151 1660 aa38.15■■■■□ 3.7
PKD1-211ENST00000474088 SLC26A8Q96RN1 970 aa38.15■■■■□ 3.7
PKD1-211ENST00000474088 MED1Q15648 1581 aaPredicted RBP38.14■■■■□ 3.7
PKD1-211ENST00000474088 KCNA6P17658 529 aa38.13■■■■□ 3.69
PKD1-211ENST00000474088 ROCK1Q13464 1354 aa38.12■■■■□ 3.69
PKD1-211ENST00000474088 SENP3Q9H4L4 574 aaPredicted RBP38.11■■■■□ 3.69
PKD1-211ENST00000474088 XIRP1Q702N8 1843 aaKnown RBP38.1■■■■□ 3.69
PKD1-211ENST00000474088 UNC13BO14795 1591 aa38.09■■■■□ 3.69
PKD1-211ENST00000474088 BCANQ96GW7 911 aa38.06■■■■□ 3.68
PKD1-211ENST00000474088 TMEM94Q12767 1356 aa38.06■■■■□ 3.68
PKD1-211ENST00000474088 GCC2Q8IWJ2 1684 aa38.04■■■■□ 3.68
PKD1-211ENST00000474088 PROSER2Q86WR7 435 aaPredicted RBP38.04■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms