RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 CROCC2H7BZ55 1655 aa31.66■■■□□ 2.66
SNX13-206ENST00000474067 DNMT1P26358 1616 aaKnown RBP31.65■■■□□ 2.66
SNX13-206ENST00000474067 DAPK1P53355 1430 aa31.64■■■□□ 2.66
SNX13-206ENST00000474067 ABCC5O15440 1437 aa31.62■■■□□ 2.65
SNX13-206ENST00000474067 PTPRKQ15262 1439 aa31.61■■■□□ 2.65
SNX13-206ENST00000474067 RNF17Q9BXT8 1623 aaKnown RBP31.6■■■□□ 2.65
SNX13-206ENST00000474067 ZC3H13Q5T200 1668 aaKnown RBP31.6■■■□□ 2.65
SNX13-206ENST00000474067 ANKRD30AQ9BXX3 1397 aa31.59■■■□□ 2.65
SNX13-206ENST00000474067 KIF15Q9NS87 1388 aa31.59■■■□□ 2.65
SNX13-206ENST00000474067 ERBINQ96RT1 1412 aa31.58■■■□□ 2.65
SNX13-206ENST00000474067 PZPP20742 1482 aa31.56■■■□□ 2.64
SNX13-206ENST00000474067 MYO3AQ8NEV4 1616 aa31.54■■■□□ 2.64
SNX13-206ENST00000474067 ZNF142P52746 1687 aaPredicted RBP31.54■■■□□ 2.64
SNX13-206ENST00000474067 FAM50AQ14320 339 aaKnown RBP31.53■■■□□ 2.64
SNX13-206ENST00000474067 RRP7BPQ9NSQ0 103 aa31.51■■■□□ 2.63
SNX13-206ENST00000474067 CEP170BQ9Y4F5 1589 aaPredicted RBP31.5■■■□□ 2.63
SNX13-206ENST00000474067 TNRQ92752 1358 aa31.48■■■□□ 2.63
SNX13-206ENST00000474067 PTPRTO14522 1441 aa31.48■■■□□ 2.63
SNX13-206ENST00000474067 KANK1Q14678 1352 aa31.47■■■□□ 2.63
SNX13-206ENST00000474067 STRCQ7RTU9 1775 aa31.47■■■□□ 2.63
SNX13-206ENST00000474067 NCOA1Q15788 1441 aa31.47■■■□□ 2.63
SNX13-206ENST00000474067 PLA2R1Q13018 1463 aa31.46■■■□□ 2.63
SNX13-206ENST00000474067 A2ML1A8K2U0 1454 aa31.46■■■□□ 2.63
SNX13-206ENST00000474067 CAMSAP1Q5T5Y3 1602 aa31.46■■■□□ 2.63
SNX13-206ENST00000474067 ABCC3O15438 1527 aa31.45■■■□□ 2.63
SNX13-206ENST00000474067 ADGRL2O95490 1459 aa31.45■■■□□ 2.62
SNX13-206ENST00000474067 PKD2Q13563 968 aa31.43■■■□□ 2.62
SNX13-206ENST00000474067 PRDM15P57071 1507 aaPredicted RBP31.43■■■□□ 2.62
SNX13-206ENST00000474067 NLRP1Q9C000 1473 aa31.42■■■□□ 2.62
SNX13-206ENST00000474067 CHIC2Q9UKJ5 165 aa31.42■■■□□ 2.62
SNX13-206ENST00000474067 ILDR1Q86SU0 546 aaPredicted RBP31.4■■■□□ 2.62
SNX13-206ENST00000474067 MROH1Q8NDA8 1641 aa31.39■■■□□ 2.62
SNX13-206ENST00000474067 FBXO41Q8TF61 875 aa31.39■■■□□ 2.62
SNX13-206ENST00000474067 FBXO31Q5XUX0 539 aaPredicted RBP31.37■■■□□ 2.61
SNX13-206ENST00000474067 DEPDC5O75140 1603 aa31.37■■■□□ 2.61
SNX13-206ENST00000474067 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.36■■■□□ 2.61
SNX13-206ENST00000474067 ARHGAP31Q2M1Z3 1444 aa31.34■■■□□ 2.61
SNX13-206ENST00000474067 THEMISQ8N1K5 641 aaPredicted RBP31.34■■■□□ 2.61
SNX13-206ENST00000474067 CEP152O94986 1710 aa31.34■■■□□ 2.61
SNX13-206ENST00000474067 SPATA31D1Q6ZQQ2 1576 aa31.34■■■□□ 2.61
SNX13-206ENST00000474067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.31■■■□□ 2.6
SNX13-206ENST00000474067 ERVK-7P63135 1459 aa31.3■■■□□ 2.6
SNX13-206ENST00000474067 CERKQ8TCT0 537 aa31.3■■■□□ 2.6
SNX13-206ENST00000474067 ANKRD50Q9ULJ7 1429 aa31.3■■■□□ 2.6
SNX13-206ENST00000474067 ROCK1Q13464 1354 aa31.29■■■□□ 2.6
SNX13-206ENST00000474067 UGGT1Q9NYU2 1555 aa31.28■■■□□ 2.6
SNX13-206ENST00000474067 LMTK2Q8IWU2 1503 aa31.27■■■□□ 2.6
SNX13-206ENST00000474067 NCKAP5LQ9HCH0 1330 aa31.24■■■□□ 2.59
SNX13-206ENST00000474067 ANKLE2Q86XL3 938 aa31.23■■■□□ 2.59
SNX13-206ENST00000474067 VWDEQ8N2E2 1590 aa31.21■■■□□ 2.59
SNX13-206ENST00000474067 POLR1AO95602 1720 aaPredicted RBP31.2■■■□□ 2.58
SNX13-206ENST00000474067 PPARGC1BQ86YN6 1023 aaKnown RBP31.17■■■□□ 2.58
SNX13-206ENST00000474067 IQSEC2Q5JU85 1478 aa31.15■■■□□ 2.58
SNX13-206ENST00000474067 RPRD2Q5VT52 1461 aaKnown RBP31.14■■■□□ 2.58
SNX13-206ENST00000474067 EFCAB6Q5THR3 1501 aa31.14■■■□□ 2.58
SNX13-206ENST00000474067 CFAP65Q6ZU64 1925 aaKnown RBP31.13■■■□□ 2.57
SNX13-206ENST00000474067 ITGAEP38570 1179 aa31.12■■■□□ 2.57
SNX13-206ENST00000474067 RRBP1Q9P2E9 1410 aaKnown RBP31.12■■■□□ 2.57
SNX13-206ENST00000474067 STAG3Q9UJ98 1225 aa31.11■■■□□ 2.57
SNX13-206ENST00000474067 UNC13BO14795 1591 aa31.09■■■□□ 2.57
SNX13-206ENST00000474067 LTBP4Q8N2S1 1624 aa31.08■■■□□ 2.57
SNX13-206ENST00000474067 MED14O60244 1454 aa31.08■■■□□ 2.57
SNX13-206ENST00000474067 UBR1Q8IWV7 1749 aa31.07■■■□□ 2.56
SNX13-206ENST00000474067 TET3O43151 1660 aa31.06■■■□□ 2.56
SNX13-206ENST00000474067 KDM5AP29375 1690 aaKnown RBP31.06■■■□□ 2.56
SNX13-206ENST00000474067 SLC52A1Q9NWF4 448 aa31.06■■■□□ 2.56
SNX13-206ENST00000474067 EID1Q9Y6B2 187 aa31.05■■■□□ 2.56
SNX13-206ENST00000474067 NPHP4O75161 1426 aaPredicted RBP31.05■■■□□ 2.56
SNX13-206ENST00000474067 NEURL4Q96JN8 1562 aa31.05■■■□□ 2.56
SNX13-206ENST00000474067 GCC2Q8IWJ2 1684 aa31.03■■■□□ 2.56
SNX13-206ENST00000474067 NOS1P29475 1434 aa31.02■■■□□ 2.56
SNX13-206ENST00000474067 ZNF335Q9H4Z2 1342 aaPredicted RBP31.01■■■□□ 2.56
SNX13-206ENST00000474067 SLIT1O75093 1534 aa31■■■□□ 2.55
SNX13-206ENST00000474067 IQGAP1P46940 1657 aa31■■■□□ 2.55
SNX13-206ENST00000474067 SCAF11Q99590 1463 aaKnown RBP30.99■■■□□ 2.55
SNX13-206ENST00000474067 CPS1P31327 1500 aa30.98■■■□□ 2.55
SNX13-206ENST00000474067 PIK3C2BO00750 1634 aa30.98■■■□□ 2.55
SNX13-206ENST00000474067 IQGAP3Q86VI3 1631 aa30.98■■■□□ 2.55
SNX13-206ENST00000474067 ARHGAP23Q9P227 1491 aa30.96■■■□□ 2.55
SNX13-206ENST00000474067 NUP155O75694 1391 aa30.96■■■□□ 2.55
SNX13-206ENST00000474067 IDI1Q13907 227 aa30.95■■■□□ 2.55
SNX13-206ENST00000474067 SYNMO15061 1565 aa30.94■■■□□ 2.54
SNX13-206ENST00000474067 TXNDC2Q86VQ3 553 aa30.94■■■□□ 2.54
SNX13-206ENST00000474067 TMEM2Q9UHN6 1383 aa30.93■■■□□ 2.54
SNX13-206ENST00000474067 HDGFP51858 240 aaKnown RBP30.93■■■□□ 2.54
SNX13-206ENST00000474067 ADGRB3O60242 1522 aa30.91■■■□□ 2.54
SNX13-206ENST00000474067 E9PCH4 1651 aa30.84■■■□□ 2.53
SNX13-206ENST00000474067 HFM1A2PYH4 1435 aa30.82■■■□□ 2.52
SNX13-206ENST00000474067 NAIPQ13075 1403 aa30.82■■■□□ 2.52
SNX13-206ENST00000474067 LTKP29376 864 aa30.81■■■□□ 2.52
SNX13-206ENST00000474067 ACIN1Q9UKV3 1341 aaKnown RBP30.78■■■□□ 2.52
SNX13-206ENST00000474067 UBAP1LF5GYI3 381 aa30.78■■■□□ 2.52
SNX13-206ENST00000474067 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.78■■■□□ 2.52
SNX13-206ENST00000474067 TOM1O60784 492 aa30.76■■■□□ 2.51
SNX13-206ENST00000474067 PPP1R15AO75807 674 aaPredicted RBP30.75■■■□□ 2.51
SNX13-206ENST00000474067 CHGAP10645 457 aaKnown RBP30.73■■■□□ 2.51
SNX13-206ENST00000474067 BCANQ96GW7 911 aa30.73■■■□□ 2.51
SNX13-206ENST00000474067 TMEM131LA2VDJ0 1609 aa30.73■■■□□ 2.51
SNX13-206ENST00000474067 TRIM52Q96A61 297 aa30.7■■■□□ 2.51
SNX13-206ENST00000474067 RIMS2Q9UQ26 1411 aa30.7■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms