RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 DNMT1P26358 1616 aaKnown RBP21.4■■□□□ 1.02
COPS7B-219ENST00000474042 PZPP20742 1482 aa21.39■■□□□ 1.01
COPS7B-219ENST00000474042 RNF17Q9BXT8 1623 aaKnown RBP21.38■■□□□ 1.01
COPS7B-219ENST00000474042 RSPH4AQ5TD94 716 aa21.38■■□□□ 1.01
COPS7B-219ENST00000474042 POLR1AO95602 1720 aaPredicted RBP21.36■■□□□ 1.01
COPS7B-219ENST00000474042 NCKAP5LQ9HCH0 1330 aa21.35■■□□□ 1.01
COPS7B-219ENST00000474042 EIF2AK4Q9P2K8 1649 aaKnown RBP21.34■■□□□ 1.01
COPS7B-219ENST00000474042 KIF3BO15066 747 aa21.34■■□□□ 1.01
COPS7B-219ENST00000474042 PKD2Q13563 968 aa21.34■■□□□ 1.01
COPS7B-219ENST00000474042 ZC3H13Q5T200 1668 aaKnown RBP21.34■■□□□ 1.01
COPS7B-219ENST00000474042 TNRQ92752 1358 aa21.33■■□□□ 1
COPS7B-219ENST00000474042 NEURL4Q96JN8 1562 aa21.32■■□□□ 1
COPS7B-219ENST00000474042 MIA2Q96PC5 1412 aa21.31■■□□□ 1
COPS7B-219ENST00000474042 MYOM3Q5VTT5 1437 aa21.3■■□□□ 1
COPS7B-219ENST00000474042 LOC105371045A0A1W2PR82 267 aa21.3■■□□□ 1
COPS7B-219ENST00000474042 ZNF335Q9H4Z2 1342 aaPredicted RBP21.29■■□□□ 1
COPS7B-219ENST00000474042 MROH1Q8NDA8 1641 aa21.29■■□□□ 1
COPS7B-219ENST00000474042 ABCC3O15438 1527 aa21.29■■□□□ 1
COPS7B-219ENST00000474042 CROCC2H7BZ55 1655 aa21.28■■□□□ 1
COPS7B-219ENST00000474042 NLRP1Q9C000 1473 aa21.27■■□□□ 1
COPS7B-219ENST00000474042 TSPY4P0CV99 314 aa21.27■■□□□ 1
COPS7B-219ENST00000474042 TSPY10P0CW01 314 aa21.27■■□□□ 1
COPS7B-219ENST00000474042 KANK4Q5T7N3 995 aaPredicted RBP21.27■■□□□ 1
COPS7B-219ENST00000474042 FBXO31Q5XUX0 539 aaPredicted RBP21.26■□□□□ 0.99
COPS7B-219ENST00000474042 SPATA31D1Q6ZQQ2 1576 aa21.26■□□□□ 0.99
COPS7B-219ENST00000474042 WASHC2CQ9Y4E1 1318 aa21.26■□□□□ 0.99
COPS7B-219ENST00000474042 CEP152O94986 1710 aa21.24■□□□□ 0.99
COPS7B-219ENST00000474042 DEPDC5O75140 1603 aa21.23■□□□□ 0.99
COPS7B-219ENST00000474042 UGGT1Q9NYU2 1555 aa21.23■□□□□ 0.99
COPS7B-219ENST00000474042 SHANK2Q9UPX8 1470 aa21.22■□□□□ 0.99
COPS7B-219ENST00000474042 DUOX2Q9NRD8 1548 aa21.22■□□□□ 0.99
COPS7B-219ENST00000474042 PRDM15P57071 1507 aaPredicted RBP21.2■□□□□ 0.98
COPS7B-219ENST00000474042 PTPN23Q9H3S7 1636 aa21.2■□□□□ 0.98
COPS7B-219ENST00000474042 ERVK-7P63135 1459 aa21.2■□□□□ 0.98
COPS7B-219ENST00000474042 MED14O60244 1454 aa21.19■□□□□ 0.98
COPS7B-219ENST00000474042 CPS1P31327 1500 aa21.19■□□□□ 0.98
COPS7B-219ENST00000474042 VWDEQ8N2E2 1590 aa21.18■□□□□ 0.98
COPS7B-219ENST00000474042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.17■□□□□ 0.98
COPS7B-219ENST00000474042 IQGAP1P46940 1657 aa21.16■□□□□ 0.98
COPS7B-219ENST00000474042 DISP3Q9P2K9 1392 aa21.16■□□□□ 0.98
COPS7B-219ENST00000474042 ABCC5O15440 1437 aa21.15■□□□□ 0.98
COPS7B-219ENST00000474042 ERBINQ96RT1 1412 aa21.14■□□□□ 0.98
COPS7B-219ENST00000474042 UBR1Q8IWV7 1749 aa21.14■□□□□ 0.97
COPS7B-219ENST00000474042 KIF15Q9NS87 1388 aa21.13■□□□□ 0.97
COPS7B-219ENST00000474042 THEMISQ8N1K5 641 aaPredicted RBP21.13■□□□□ 0.97
COPS7B-219ENST00000474042 NPHP4O75161 1426 aaPredicted RBP21.12■□□□□ 0.97
COPS7B-219ENST00000474042 DAPK1P53355 1430 aa21.12■□□□□ 0.97
COPS7B-219ENST00000474042 FGD6Q6ZV73 1430 aa21.12■□□□□ 0.97
COPS7B-219ENST00000474042 UBAP1LF5GYI3 381 aa21.11■□□□□ 0.97
COPS7B-219ENST00000474042 ANKLE2Q86XL3 938 aa21.11■□□□□ 0.97
COPS7B-219ENST00000474042 ARHGAP31Q2M1Z3 1444 aa21.1■□□□□ 0.97
COPS7B-219ENST00000474042 CFAP65Q6ZU64 1925 aaKnown RBP21.1■□□□□ 0.97
COPS7B-219ENST00000474042 STRCP1A6NGW2 1772 aa21.08■□□□□ 0.97
COPS7B-219ENST00000474042 SYNMO15061 1565 aa21.06■□□□□ 0.96
COPS7B-219ENST00000474042 ILDR2Q71H61 639 aa21.06■□□□□ 0.96
COPS7B-219ENST00000474042 ALKQ9UM73 1620 aa21.05■□□□□ 0.96
COPS7B-219ENST00000474042 ARHGAP23Q9P227 1491 aa21.05■□□□□ 0.96
COPS7B-219ENST00000474042 SLIT1O75093 1534 aa21.04■□□□□ 0.96
COPS7B-219ENST00000474042 LMTK2Q8IWU2 1503 aa21.04■□□□□ 0.96
COPS7B-219ENST00000474042 SCAF11Q99590 1463 aaKnown RBP21.02■□□□□ 0.96
COPS7B-219ENST00000474042 APLP2Q06481 763 aa21.02■□□□□ 0.96
COPS7B-219ENST00000474042 PIK3C2BO00750 1634 aa21.02■□□□□ 0.96
COPS7B-219ENST00000474042 KDM5AP29375 1690 aaKnown RBP21.02■□□□□ 0.95
COPS7B-219ENST00000474042 RRP7BPQ9NSQ0 103 aa21.01■□□□□ 0.95
COPS7B-219ENST00000474042 ADGRL2O95490 1459 aa21.01■□□□□ 0.95
COPS7B-219ENST00000474042 LRRC7Q96NW7 1537 aa20.99■□□□□ 0.95
COPS7B-219ENST00000474042 ANKRD30AQ9BXX3 1397 aa20.98■□□□□ 0.95
COPS7B-219ENST00000474042 EFCAB6Q5THR3 1501 aa20.98■□□□□ 0.95
COPS7B-219ENST00000474042 KANK1Q14678 1352 aa20.96■□□□□ 0.95
COPS7B-219ENST00000474042 TOM1O60784 492 aa20.95■□□□□ 0.94
COPS7B-219ENST00000474042 SOCS7O14512 581 aa20.94■□□□□ 0.94
COPS7B-219ENST00000474042 MED1Q15648 1581 aaPredicted RBP20.93■□□□□ 0.94
COPS7B-219ENST00000474042 XIRP1Q702N8 1843 aaKnown RBP20.92■□□□□ 0.94
COPS7B-219ENST00000474042 HSPA1LP34931 641 aa20.92■□□□□ 0.94
COPS7B-219ENST00000474042 PIP4K2BP78356 416 aa20.92■□□□□ 0.94
COPS7B-219ENST00000474042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.92■□□□□ 0.946e-8■■□□□ 11.8
COPS7B-219ENST00000474042 NOS1P29475 1434 aa20.92■□□□□ 0.94
COPS7B-219ENST00000474042 ADGRB3O60242 1522 aa20.91■□□□□ 0.94
COPS7B-219ENST00000474042 LTKP29376 864 aa20.91■□□□□ 0.94
COPS7B-219ENST00000474042 SCAF1Q9H7N4 1312 aaKnown RBP20.91■□□□□ 0.94
COPS7B-219ENST00000474042 TMEM2Q9UHN6 1383 aa20.9■□□□□ 0.94
COPS7B-219ENST00000474042 CHIC2Q9UKJ5 165 aa20.9■□□□□ 0.94
COPS7B-219ENST00000474042 TET3O43151 1660 aa20.87■□□□□ 0.93
COPS7B-219ENST00000474042 TXNDC2Q86VQ3 553 aa20.87■□□□□ 0.93
COPS7B-219ENST00000474042 RPRD2Q5VT52 1461 aaKnown RBP20.87■□□□□ 0.93
COPS7B-219ENST00000474042 UNC13BO14795 1591 aa20.86■□□□□ 0.93
COPS7B-219ENST00000474042 GCC2Q8IWJ2 1684 aa20.85■□□□□ 0.93
COPS7B-219ENST00000474042 ANKRD50Q9ULJ7 1429 aa20.85■□□□□ 0.93
COPS7B-219ENST00000474042 EID1Q9Y6B2 187 aa20.84■□□□□ 0.93
COPS7B-219ENST00000474042 IDI1Q13907 227 aa20.83■□□□□ 0.93
COPS7B-219ENST00000474042 NWD1Q149M9 1564 aa20.82■□□□□ 0.92
COPS7B-219ENST00000474042 MYO5BQ9ULV0 1848 aa20.82■□□□□ 0.92
COPS7B-219ENST00000474042 FAM50AQ14320 339 aaKnown RBP20.8■□□□□ 0.92
COPS7B-219ENST00000474042 STAG3Q9UJ98 1225 aa20.79■□□□□ 0.92
COPS7B-219ENST00000474042 TMEM131LA2VDJ0 1609 aa20.77■□□□□ 0.92
COPS7B-219ENST00000474042 IQGAP3Q86VI3 1631 aa20.77■□□□□ 0.92
COPS7B-219ENST00000474042 ZFYVE9O95405 1425 aa20.77■□□□□ 0.91
COPS7B-219ENST00000474042 E9PCH4 1651 aa20.77■□□□□ 0.91
COPS7B-219ENST00000474042 NKTRP30414 1462 aaKnown RBP20.76■□□□□ 0.91
COPS7B-219ENST00000474042 SLC52A1Q9NWF4 448 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms