RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 PTPRKQ15262 1439 aa11.41□□□□□ -0.58
CCDC93-207ENST00000474006 SPAG9O60271 1321 aaKnown RBP11.4□□□□□ -0.58
CCDC93-207ENST00000474006 SAMD9LQ8IVG5 1584 aa11.4□□□□□ -0.58
CCDC93-207ENST00000474006 CDC42BPBQ9Y5S2 1711 aa11.4□□□□□ -0.58
CCDC93-207ENST00000474006 DENND4BO75064 1496 aaPredicted RBP11.39□□□□□ -0.59
CCDC93-207ENST00000474006 COL17A1Q9UMD9 1497 aaPredicted RBP11.39□□□□□ -0.59
CCDC93-207ENST00000474006 DAPK1P53355 1430 aa11.39□□□□□ -0.59
CCDC93-207ENST00000474006 MYO5CQ9NQX4 1742 aa11.39□□□□□ -0.59
CCDC93-207ENST00000474006 RRP7BPQ9NSQ0 103 aa11.39□□□□□ -0.59
CCDC93-207ENST00000474006 KIF13AQ9H1H9 1805 aa11.38□□□□□ -0.59
CCDC93-207ENST00000474006 ITSN2Q9NZM3 1697 aa11.38□□□□□ -0.59
CCDC93-207ENST00000474006 SYCP2Q9BX26 1530 aa11.37□□□□□ -0.59
CCDC93-207ENST00000474006 ABCC1P33527 1531 aa11.36□□□□□ -0.59
CCDC93-207ENST00000474006 CCDC141Q6ZP82 1450 aa11.36□□□□□ -0.59
CCDC93-207ENST00000474006 POGZQ7Z3K3 1410 aa11.35□□□□□ -0.59
CCDC93-207ENST00000474006 C9orf84Q5VXU9 1444 aa11.35□□□□□ -0.59
CCDC93-207ENST00000474006 TSPOAP1O95153 1857 aa11.34□□□□□ -0.59
CCDC93-207ENST00000474006 PPRC1Q5VV67 1664 aaKnown RBP11.34□□□□□ -0.59
CCDC93-207ENST00000474006 ZNF518AQ6AHZ1 1483 aa11.34□□□□□ -0.59
CCDC93-207ENST00000474006 ANKRD30AQ9BXX3 1397 aa11.34□□□□□ -0.59
CCDC93-207ENST00000474006 RTEL1-TNFRSF6BF6WH68 1400 aa11.34□□□□□ -0.59
CCDC93-207ENST00000474006 NCOA1Q15788 1441 aa11.34□□□□□ -0.59
CCDC93-207ENST00000474006 ARHGEF5Q12774 1597 aa11.33□□□□□ -0.6
CCDC93-207ENST00000474006 CFAP74Q9C0B2 1584 aa11.33□□□□□ -0.6
CCDC93-207ENST00000474006 ROCK1Q13464 1354 aa11.33□□□□□ -0.6
CCDC93-207ENST00000474006 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
CCDC93-207ENST00000474006 MLH3Q9UHC1 1453 aa11.31□□□□□ -0.6
CCDC93-207ENST00000474006 DNMT1P26358 1616 aaKnown RBP11.31□□□□□ -0.6
CCDC93-207ENST00000474006 KIF15Q9NS87 1388 aa11.3□□□□□ -0.6
CCDC93-207ENST00000474006 RGL2O15211 777 aa11.3□□□□□ -0.6
CCDC93-207ENST00000474006 CIZ1Q9ULV3 898 aaPredicted RBP11.3□□□□□ -0.6
CCDC93-207ENST00000474006 SHANK2Q9UPX8 1470 aa11.3□□□□□ -0.6
CCDC93-207ENST00000474006 SETD5Q9C0A6 1442 aa11.29□□□□□ -0.6
CCDC93-207ENST00000474006 HRCP23327 699 aa11.29□□□□□ -0.6
CCDC93-207ENST00000474006 DHX29Q7Z478 1369 aaKnown RBP11.28□□□□□ -0.6
CCDC93-207ENST00000474006 NAIPQ13075 1403 aa11.28□□□□□ -0.6
CCDC93-207ENST00000474006 YEATS2Q9ULM3 1422 aa11.28□□□□□ -0.6
CCDC93-207ENST00000474006 ADGRL2O95490 1459 aa11.28□□□□□ -0.6
CCDC93-207ENST00000474006 MAGI2Q86UL8 1455 aa11.28□□□□□ -0.6
CCDC93-207ENST00000474006 HFM1A2PYH4 1435 aa11.27□□□□□ -0.6
CCDC93-207ENST00000474006 KIF3BO15066 747 aa11.27□□□□□ -0.61
CCDC93-207ENST00000474006 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
CCDC93-207ENST00000474006 BBXQ8WY36 941 aaPredicted RBP11.27□□□□□ -0.61
CCDC93-207ENST00000474006 CLEC11AQ9Y240 323 aa11.27□□□□□ -0.61
CCDC93-207ENST00000474006 KDM5CP41229 1560 aa11.26□□□□□ -0.61
CCDC93-207ENST00000474006 RAB3GAP2Q9H2M9 1393 aa11.26□□□□□ -0.61
CCDC93-207ENST00000474006 ANKRD50Q9ULJ7 1429 aa11.26□□□□□ -0.61
CCDC93-207ENST00000474006 ATP10AO60312 1499 aa11.25□□□□□ -0.61
CCDC93-207ENST00000474006 MAST1Q9Y2H9 1570 aa11.25□□□□□ -0.61
CCDC93-207ENST00000474006 NUBP1P53384 320 aa11.25□□□□□ -0.61
CCDC93-207ENST00000474006 GSE1Q14687 1217 aa11.25□□□□□ -0.61
CCDC93-207ENST00000474006 TRIM52Q96A61 297 aa11.25□□□□□ -0.61
CCDC93-207ENST00000474006 CREBZFQ9NS37 354 aa11.25□□□□□ -0.61
CCDC93-207ENST00000474006 ATP7AQ04656 1500 aa11.25□□□□□ -0.61
CCDC93-207ENST00000474006 FRMPD1Q5SYB0 1578 aa11.24□□□□□ -0.61
CCDC93-207ENST00000474006 ZFYVE16Q7Z3T8 1539 aa11.24□□□□□ -0.61
CCDC93-207ENST00000474006 KDM6BO15054 1643 aa11.24□□□□□ -0.61
CCDC93-207ENST00000474006 GGT6Q6P531 493 aa11.23□□□□□ -0.61
CCDC93-207ENST00000474006 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.23□□□□□ -0.61
CCDC93-207ENST00000474006 ARID4BQ4LE39 1312 aaPredicted RBP11.23□□□□□ -0.61
CCDC93-207ENST00000474006 A2MP01023 1474 aa11.23□□□□□ -0.61
CCDC93-207ENST00000474006 RICTORQ6R327 1708 aa11.23□□□□□ -0.61
CCDC93-207ENST00000474006 ZMYM4Q5VZL5 1548 aa11.22□□□□□ -0.61
CCDC93-207ENST00000474006 ACIN1Q9UKV3 1341 aaKnown RBP11.22□□□□□ -0.61
CCDC93-207ENST00000474006 DUOX2Q9NRD8 1548 aa11.21□□□□□ -0.61
CCDC93-207ENST00000474006 MNX1P50219 401 aaPredicted RBP11.21□□□□□ -0.61
CCDC93-207ENST00000474006 MLECQ14165 292 aa11.21□□□□□ -0.61
CCDC93-207ENST00000474006 KIDINS220Q9ULH0 1771 aa11.21□□□□□ -0.62
CCDC93-207ENST00000474006 HECW2Q9P2P5 1572 aa11.2□□□□□ -0.62
CCDC93-207ENST00000474006 INO80Q9ULG1 1556 aaPredicted RBP11.2□□□□□ -0.62
CCDC93-207ENST00000474006 NUP155O75694 1391 aa11.2□□□□□ -0.62
CCDC93-207ENST00000474006 ERBINQ96RT1 1412 aa11.19□□□□□ -0.62
CCDC93-207ENST00000474006 HAP1P54257 671 aaPredicted RBP11.19□□□□□ -0.62
CCDC93-207ENST00000474006 CROCC2H7BZ55 1655 aa11.18□□□□□ -0.62
CCDC93-207ENST00000474006 PITPNM1O00562 1244 aa11.18□□□□□ -0.62
CCDC93-207ENST00000474006 MPHOSPH9Q99550 1183 aa11.18□□□□□ -0.62
CCDC93-207ENST00000474006 PLXNC1O60486 1568 aa11.18□□□□□ -0.62
CCDC93-207ENST00000474006 DIP2CQ9Y2E4 1556 aa11.18□□□□□ -0.62
CCDC93-207ENST00000474006 WASHC2CQ9Y4E1 1318 aa11.17□□□□□ -0.62
CCDC93-207ENST00000474006 ABCA6Q8N139 1617 aa11.16□□□□□ -0.62
CCDC93-207ENST00000474006 FAM212AQ96EL1 285 aa11.15□□□□□ -0.62
CCDC93-207ENST00000474006 KANK1Q14678 1352 aa11.15□□□□□ -0.63
CCDC93-207ENST00000474006 DCAF8Q5TAQ9 597 aa11.14□□□□□ -0.63
CCDC93-207ENST00000474006 ESF1Q9H501 851 aaKnown RBP11.14□□□□□ -0.63
CCDC93-207ENST00000474006 ARHGEF40Q8TER5 1519 aa11.14□□□□□ -0.63
CCDC93-207ENST00000474006 ADGBQ8N7X0 1667 aa11.14□□□□□ -0.63
CCDC93-207ENST00000474006 CCER1Q8TC90 406 aaPredicted RBP11.13□□□□□ -0.63
CCDC93-207ENST00000474006 AGLP35573 1532 aa11.13□□□□□ -0.63
CCDC93-207ENST00000474006 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
CCDC93-207ENST00000474006 REREQ9P2R6 1566 aa11.11□□□□□ -0.63
CCDC93-207ENST00000474006 HS6ST3Q8IZP7 471 aa11.11□□□□□ -0.63
CCDC93-207ENST00000474006 VSIG10Q8N0Z9 540 aa11.11□□□□□ -0.63
CCDC93-207ENST00000474006 RNF25Q96BH1 459 aaPredicted RBP11.11□□□□□ -0.63
CCDC93-207ENST00000474006 DHX57Q6P158 1386 aaKnown RBP11.11□□□□□ -0.63
CCDC93-207ENST00000474006 PAXIP1Q6ZW49 1069 aaPredicted RBP11.1□□□□□ -0.63
CCDC93-207ENST00000474006 GCC2Q8IWJ2 1684 aa11.09□□□□□ -0.63
CCDC93-207ENST00000474006 PZPP20742 1482 aa11.09□□□□□ -0.63
CCDC93-207ENST00000474006 CHRM1P11229 460 aaPredicted RBP11.09□□□□□ -0.63
CCDC93-207ENST00000474006 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
CCDC93-207ENST00000474006 ZMYM3Q14202 1370 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms