RNA–Protein interactions for RNA: ENST00000473699.5

SSR2-207, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 3

Gene SSR2, Length 1,027 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-207ENST00000473699 NCOA1Q15788 1441 aa23.65■■□□□ 1.38
SSR2-207ENST00000473699 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.65■■□□□ 1.38
SSR2-207ENST00000473699 MROH2AA6NES4 1674 aa23.64■■□□□ 1.38
SSR2-207ENST00000473699 SETD1BQ9UPS6 1966 aaKnown RBP23.63■■□□□ 1.37
SSR2-207ENST00000473699 EIF2AK4Q9P2K8 1649 aaKnown RBP23.62■■□□□ 1.37
SSR2-207ENST00000473699 ERBINQ96RT1 1412 aa23.61■■□□□ 1.37
SSR2-207ENST00000473699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.61■■□□□ 1.375e-8■□□□□ 8.5
SSR2-207ENST00000473699 ADGRL2O95490 1459 aa23.6■■□□□ 1.37
SSR2-207ENST00000473699 PTPRKQ15262 1439 aa23.58■■□□□ 1.36
SSR2-207ENST00000473699 RRBP1Q9P2E9 1410 aaKnown RBP23.58■■□□□ 1.36
SSR2-207ENST00000473699 KDM5DQ9BY66 1539 aa23.57■■□□□ 1.36
SSR2-207ENST00000473699 RNF17Q9BXT8 1623 aaKnown RBP23.56■■□□□ 1.36
SSR2-207ENST00000473699 FAM135AQ9P2D6 1515 aa23.56■■□□□ 1.36
SSR2-207ENST00000473699 UHRF1BP1Q6BDS2 1440 aa23.56■■□□□ 1.36
SSR2-207ENST00000473699 LMTK3Q96Q04 1460 aa23.56■■□□□ 1.36
SSR2-207ENST00000473699 PREX1Q8TCU6 1659 aa23.55■■□□□ 1.36
SSR2-207ENST00000473699 HSPA2P54652 639 aa23.55■■□□□ 1.36
SSR2-207ENST00000473699 KANK1Q14678 1352 aa23.54■■□□□ 1.36
SSR2-207ENST00000473699 NPATQ14207 1427 aa23.54■■□□□ 1.36
SSR2-207ENST00000473699 ROCK1Q13464 1354 aa23.53■■□□□ 1.36
SSR2-207ENST00000473699 ANKRD50Q9ULJ7 1429 aa23.52■■□□□ 1.36
SSR2-207ENST00000473699 FBXO31Q5XUX0 539 aaPredicted RBP23.51■■□□□ 1.35
SSR2-207ENST00000473699 ZC3H13Q5T200 1668 aaKnown RBP23.48■■□□□ 1.35
SSR2-207ENST00000473699 ABCC3O15438 1527 aa23.48■■□□□ 1.35
SSR2-207ENST00000473699 MROH1Q8NDA8 1641 aa23.48■■□□□ 1.35
SSR2-207ENST00000473699 PZPP20742 1482 aa23.47■■□□□ 1.35
SSR2-207ENST00000473699 CEP152O94986 1710 aa23.46■■□□□ 1.35
SSR2-207ENST00000473699 PRDM15P57071 1507 aaPredicted RBP23.44■■□□□ 1.34
SSR2-207ENST00000473699 DEPDC5O75140 1603 aa23.44■■□□□ 1.34
SSR2-207ENST00000473699 TNRQ92752 1358 aa23.43■■□□□ 1.34
SSR2-207ENST00000473699 CFAP65Q6ZU64 1925 aaKnown RBP23.43■■□□□ 1.34
SSR2-207ENST00000473699 CAMSAP1Q5T5Y3 1602 aa23.41■■□□□ 1.34
SSR2-207ENST00000473699 ARHGAP31Q2M1Z3 1444 aa23.37■■□□□ 1.33
SSR2-207ENST00000473699 DMRT2Q9Y5R5 561 aa23.37■■□□□ 1.33
SSR2-207ENST00000473699 MYO3AQ8NEV4 1616 aa23.37■■□□□ 1.33
SSR2-207ENST00000473699 VWDEQ8N2E2 1590 aa23.35■■□□□ 1.33
SSR2-207ENST00000473699 LMTK2Q8IWU2 1503 aa23.34■■□□□ 1.33
SSR2-207ENST00000473699 A2ML1A8K2U0 1454 aa23.34■■□□□ 1.33
SSR2-207ENST00000473699 CEP170BQ9Y4F5 1589 aaPredicted RBP23.33■■□□□ 1.33
SSR2-207ENST00000473699 ERVK-7P63135 1459 aa23.33■■□□□ 1.33
SSR2-207ENST00000473699 NUP155O75694 1391 aa23.33■■□□□ 1.33
SSR2-207ENST00000473699 NLRP1Q9C000 1473 aa23.32■■□□□ 1.32
SSR2-207ENST00000473699 THEMISQ8N1K5 641 aaPredicted RBP23.32■■□□□ 1.32
SSR2-207ENST00000473699 SPATA31D1Q6ZQQ2 1576 aa23.31■■□□□ 1.32
SSR2-207ENST00000473699 NAIPQ13075 1403 aa23.31■■□□□ 1.32
SSR2-207ENST00000473699 ZNF142P52746 1687 aaPredicted RBP23.31■■□□□ 1.32
SSR2-207ENST00000473699 UNC13BO14795 1591 aa23.31■■□□□ 1.32
SSR2-207ENST00000473699 STRCQ7RTU9 1775 aa23.28■■□□□ 1.32
SSR2-207ENST00000473699 TRIM52Q96A61 297 aa23.28■■□□□ 1.32
SSR2-207ENST00000473699 NCKAP5LQ9HCH0 1330 aa23.28■■□□□ 1.32
SSR2-207ENST00000473699 STAG3Q9UJ98 1225 aa23.27■■□□□ 1.32
SSR2-207ENST00000473699 HFM1A2PYH4 1435 aa23.26■■□□□ 1.31
SSR2-207ENST00000473699 PKD2Q13563 968 aa23.26■■□□□ 1.31
SSR2-207ENST00000473699 EFCAB6Q5THR3 1501 aa23.26■■□□□ 1.31
SSR2-207ENST00000473699 UGGT1Q9NYU2 1555 aa23.26■■□□□ 1.31
SSR2-207ENST00000473699 TET3O43151 1660 aa23.25■■□□□ 1.31
SSR2-207ENST00000473699 GCC2Q8IWJ2 1684 aa23.25■■□□□ 1.31
SSR2-207ENST00000473699 IQGAP3Q86VI3 1631 aa23.23■■□□□ 1.31
SSR2-207ENST00000473699 ANKLE2Q86XL3 938 aa23.23■■□□□ 1.31
SSR2-207ENST00000473699 RPRD2Q5VT52 1461 aaKnown RBP23.23■■□□□ 1.31
SSR2-207ENST00000473699 IDI1Q13907 227 aa23.22■■□□□ 1.31
SSR2-207ENST00000473699 PLA2R1Q13018 1463 aa23.22■■□□□ 1.31
SSR2-207ENST00000473699 SLC52A1Q9NWF4 448 aa23.21■■□□□ 1.31
SSR2-207ENST00000473699 PTPRTO14522 1441 aa23.2■■□□□ 1.3
SSR2-207ENST00000473699 NOS1P29475 1434 aa23.19■■□□□ 1.3
SSR2-207ENST00000473699 E9PCH4 1651 aa23.16■■□□□ 1.3
SSR2-207ENST00000473699 SYNMO15061 1565 aa23.14■■□□□ 1.3
SSR2-207ENST00000473699 UBR1Q8IWV7 1749 aa23.14■■□□□ 1.3
SSR2-207ENST00000473699 CHGAP10645 457 aaKnown RBP23.14■■□□□ 1.29
SSR2-207ENST00000473699 SLC4A1APQ9BWU0 796 aaKnown RBP23.14■■□□□ 1.29
SSR2-207ENST00000473699 EID1Q9Y6B2 187 aa23.14■■□□□ 1.29
SSR2-207ENST00000473699 PIK3C2BO00750 1634 aa23.14■■□□□ 1.29
SSR2-207ENST00000473699 ACIN1Q9UKV3 1341 aaKnown RBP23.13■■□□□ 1.29
SSR2-207ENST00000473699 TXNDC2Q86VQ3 553 aa23.12■■□□□ 1.29
SSR2-207ENST00000473699 SETD5Q9C0A6 1442 aa23.12■■□□□ 1.29
SSR2-207ENST00000473699 POLR1AO95602 1720 aaPredicted RBP23.11■■□□□ 1.29
SSR2-207ENST00000473699 HDGFP51858 240 aaKnown RBP23.08■■□□□ 1.29
SSR2-207ENST00000473699 TMEM2Q9UHN6 1383 aa23.06■■□□□ 1.28
SSR2-207ENST00000473699 KDM5AP29375 1690 aaKnown RBP23.06■■□□□ 1.28
SSR2-207ENST00000473699 LTKP29376 864 aa23.05■■□□□ 1.28
SSR2-207ENST00000473699 CERKQ8TCT0 537 aa23.05■■□□□ 1.28
SSR2-207ENST00000473699 NPHP4O75161 1426 aaPredicted RBP23.05■■□□□ 1.28
SSR2-207ENST00000473699 MPHOSPH9Q99550 1183 aa23.04■■□□□ 1.28
SSR2-207ENST00000473699 SLIT1O75093 1534 aa23.03■■□□□ 1.28
SSR2-207ENST00000473699 ARHGAP23Q9P227 1491 aa23.03■■□□□ 1.28
SSR2-207ENST00000473699 ADGRB3O60242 1522 aa23.03■■□□□ 1.28
SSR2-207ENST00000473699 SPHKAPQ2M3C7 1700 aa23.02■■□□□ 1.28
SSR2-207ENST00000473699 BCANQ96GW7 911 aa23.02■■□□□ 1.28
SSR2-207ENST00000473699 MED14O60244 1454 aa23.02■■□□□ 1.28
SSR2-207ENST00000473699 SCAF11Q99590 1463 aaKnown RBP23.02■■□□□ 1.28
SSR2-207ENST00000473699 RAB3GAP2Q9H2M9 1393 aa23.01■■□□□ 1.27
SSR2-207ENST00000473699 NEURL4Q96JN8 1562 aa23.01■■□□□ 1.27
SSR2-207ENST00000473699 ZNF335Q9H4Z2 1342 aaPredicted RBP23.01■■□□□ 1.27
SSR2-207ENST00000473699 PPP1R15AO75807 674 aaPredicted RBP22.99■■□□□ 1.27
SSR2-207ENST00000473699 MYO5BQ9ULV0 1848 aa22.98■■□□□ 1.27
SSR2-207ENST00000473699 TMEM131LA2VDJ0 1609 aa22.98■■□□□ 1.27
SSR2-207ENST00000473699 IQGAP1P46940 1657 aa22.98■■□□□ 1.27
SSR2-207ENST00000473699 FOXD1Q16676 465 aa22.98■■□□□ 1.27
SSR2-207ENST00000473699 ZNF326Q5BKZ1 582 aaKnown RBP22.98■■□□□ 1.27
SSR2-207ENST00000473699 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms