RNA–Protein interactions for RNA: ENST00000473517.1

SATB2-208, Transcript of SATB homeobox 2, humanhuman

TSL 3

Gene SATB2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-208ENST00000473517 FAM135AQ9P2D6 1515 aa13.83□□□□□ -0.2
SATB2-208ENST00000473517 PLXNC1O60486 1568 aa13.83□□□□□ -0.2
SATB2-208ENST00000473517 FMN1Q68DA7 1419 aa13.81□□□□□ -0.2
SATB2-208ENST00000473517 STRCP1A6NGW2 1772 aa13.81□□□□□ -0.2
SATB2-208ENST00000473517 MIA2Q96PC5 1412 aa13.81□□□□□ -0.2
SATB2-208ENST00000473517 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
SATB2-208ENST00000473517 UGGT1Q9NYU2 1555 aa13.79□□□□□ -0.2
SATB2-208ENST00000473517 IQGAP1P46940 1657 aa13.79□□□□□ -0.2
SATB2-208ENST00000473517 HNRNPMP52272 730 aaKnown RBP eCLIP13.79□□□□□ -0.2
SATB2-208ENST00000473517 ZNF777Q9ULD5 760 aaPredicted RBP13.79□□□□□ -0.2
SATB2-208ENST00000473517 JCADQ9P266 1359 aa13.79□□□□□ -0.2
SATB2-208ENST00000473517 PREX2Q70Z35 1606 aa13.79□□□□□ -0.2
SATB2-208ENST00000473517 RXRBP28702 533 aa13.78□□□□□ -0.2
SATB2-208ENST00000473517 PZPP20742 1482 aa13.78□□□□□ -0.2
SATB2-208ENST00000473517 ATP7AQ04656 1500 aa13.77□□□□□ -0.21
SATB2-208ENST00000473517 FOXD1Q16676 465 aa13.76□□□□□ -0.21
SATB2-208ENST00000473517 KDM5DQ9BY66 1539 aa13.75□□□□□ -0.21
SATB2-208ENST00000473517 KIAA1107Q9UPP5 1409 aa13.75□□□□□ -0.21
SATB2-208ENST00000473517 CDK12Q9NYV4 1490 aaPredicted RBP13.74□□□□□ -0.21
SATB2-208ENST00000473517 MEX3CQ5U5Q3 659 aaKnown RBP13.73□□□□□ -0.21
SATB2-208ENST00000473517 SPATA31A6Q5VVP1 1343 aa13.72□□□□□ -0.21
SATB2-208ENST00000473517 WASHC2CQ9Y4E1 1318 aa13.72□□□□□ -0.21
SATB2-208ENST00000473517 ZRANB1Q9UGI0 708 aa13.72□□□□□ -0.21
SATB2-208ENST00000473517 SYCP2Q9BX26 1530 aa13.72□□□□□ -0.21
SATB2-208ENST00000473517 INO80Q9ULG1 1556 aaPredicted RBP13.71□□□□□ -0.22
SATB2-208ENST00000473517 TMEM94Q12767 1356 aa13.71□□□□□ -0.22
SATB2-208ENST00000473517 DHX29Q7Z478 1369 aaKnown RBP13.71□□□□□ -0.22
SATB2-208ENST00000473517 LRRC9Q6ZRR7 1453 aa13.7□□□□□ -0.22
SATB2-208ENST00000473517 PLEKHH2Q8IVE3 1493 aa13.7□□□□□ -0.22
SATB2-208ENST00000473517 ROBO1Q9Y6N7 1651 aa13.69□□□□□ -0.22
SATB2-208ENST00000473517 KIF3BO15066 747 aa13.69□□□□□ -0.22
SATB2-208ENST00000473517 ZC3H13Q5T200 1668 aaKnown RBP13.67□□□□□ -0.22
SATB2-208ENST00000473517 TXNDC2Q86VQ3 553 aa13.67□□□□□ -0.22
SATB2-208ENST00000473517 SLAIN2Q9P270 581 aa13.67□□□□□ -0.22
SATB2-208ENST00000473517 LRP6O75581 1613 aa13.67□□□□□ -0.22
SATB2-208ENST00000473517 SCAF11Q99590 1463 aaKnown RBP13.67□□□□□ -0.22
SATB2-208ENST00000473517 XIRP1Q702N8 1843 aaKnown RBP13.67□□□□□ -0.22
SATB2-208ENST00000473517 FGD6Q6ZV73 1430 aa13.66□□□□□ -0.22
SATB2-208ENST00000473517 GPATCH8Q9UKJ3 1502 aaKnown RBP13.66□□□□□ -0.22
SATB2-208ENST00000473517 LTKP29376 864 aa13.66□□□□□ -0.22
SATB2-208ENST00000473517 CFDP1Q9UEE9 299 aaPredicted RBP13.66□□□□□ -0.22
SATB2-208ENST00000473517 ADGBQ8N7X0 1667 aa13.66□□□□□ -0.22
SATB2-208ENST00000473517 CDC42BPAQ5VT25 1732 aa13.65□□□□□ -0.22
SATB2-208ENST00000473517 KCNA6P17658 529 aa13.65□□□□□ -0.22
SATB2-208ENST00000473517 PROSER2Q86WR7 435 aaPredicted RBP13.65□□□□□ -0.22
SATB2-208ENST00000473517 RTEL1-TNFRSF6BF6WH68 1400 aa13.64□□□□□ -0.23
SATB2-208ENST00000473517 EEA1Q15075 1411 aa13.64□□□□□ -0.23
SATB2-208ENST00000473517 ARHGAP35Q9NRY4 1499 aa13.63□□□□□ -0.23
SATB2-208ENST00000473517 EID1Q9Y6B2 187 aa13.63□□□□□ -0.23
SATB2-208ENST00000473517 CCDC18Q5T9S5 1454 aa13.61□□□□□ -0.23
SATB2-208ENST00000473517 MSH6P52701 1360 aa13.61□□□□□ -0.23
SATB2-208ENST00000473517 NUTM2BA6NNL0 878 aaPredicted RBP13.61□□□□□ -0.23
SATB2-208ENST00000473517 NUTM2EB1AL46 878 aaPredicted RBP13.61□□□□□ -0.23
SATB2-208ENST00000473517 RBM6P78332 1123 aaKnown RBP13.61□□□□□ -0.23
SATB2-208ENST00000473517 NUTM2DQ5VT03 806 aaPredicted RBP13.61□□□□□ -0.23
SATB2-208ENST00000473517 NUTM2AQ8IVF1 878 aaPredicted RBP13.61□□□□□ -0.23
SATB2-208ENST00000473517 PHLPP1O60346 1717 aa13.61□□□□□ -0.23
SATB2-208ENST00000473517 ARHGAP23Q9P227 1491 aa13.61□□□□□ -0.23
SATB2-208ENST00000473517 MAP3K1Q13233 1512 aa13.6□□□□□ -0.23
SATB2-208ENST00000473517 RBM33Q96EV2 1170 aaKnown RBP13.6□□□□□ -0.23
SATB2-208ENST00000473517 SLIT1O75093 1534 aa13.59□□□□□ -0.23
SATB2-208ENST00000473517 SETBP1Q9Y6X0 1596 aa13.58□□□□□ -0.23
SATB2-208ENST00000473517 RGS12O14924 1447 aa13.58□□□□□ -0.24
SATB2-208ENST00000473517 COL16A1Q07092 1604 aaPredicted RBP13.58□□□□□ -0.24
SATB2-208ENST00000473517 AFF2P51816 1311 aa13.58□□□□□ -0.24
SATB2-208ENST00000473517 ATAD2Q6PL18 1390 aa13.58□□□□□ -0.24
SATB2-208ENST00000473517 NCOA2Q15596 1464 aa13.57□□□□□ -0.24
SATB2-208ENST00000473517 LRRIQ1Q96JM4 1722 aa13.57□□□□□ -0.24
SATB2-208ENST00000473517 QTRT2Q9H974 415 aaKnown RBP13.57□□□□□ -0.24
SATB2-208ENST00000473517 PRDM15P57071 1507 aaPredicted RBP13.56□□□□□ -0.24
SATB2-208ENST00000473517 CCNB3Q8WWL7 1395 aa13.56□□□□□ -0.24
SATB2-208ENST00000473517 CASKIN1Q8WXD9 1431 aa13.56□□□□□ -0.24
SATB2-208ENST00000473517 ERVK-7P63135 1459 aa13.55□□□□□ -0.24
SATB2-208ENST00000473517 MBD5Q9P267 1494 aa13.55□□□□□ -0.24
SATB2-208ENST00000473517 UBTFP17480 764 aaKnown RBP13.55□□□□□ -0.24
SATB2-208ENST00000473517 CCDC125Q86Z20 511 aa13.54□□□□□ -0.24
SATB2-208ENST00000473517 NGLY1Q96IV0 654 aa13.54□□□□□ -0.24
SATB2-208ENST00000473517 ZNF644Q9H582 1327 aaPredicted RBP13.54□□□□□ -0.24
SATB2-208ENST00000473517 ABCC3O15438 1527 aa13.54□□□□□ -0.24
SATB2-208ENST00000473517 NKTRP30414 1462 aaKnown RBP13.53□□□□□ -0.24
SATB2-208ENST00000473517 TMEM2Q9UHN6 1383 aa13.52□□□□□ -0.25
SATB2-208ENST00000473517 UBR1Q8IWV7 1749 aa13.52□□□□□ -0.25
SATB2-208ENST00000473517 SLC26A8Q96RN1 970 aa13.51□□□□□ -0.25
SATB2-208ENST00000473517 TIAM1Q13009 1591 aa13.5□□□□□ -0.25
SATB2-208ENST00000473517 RSPH4AQ5TD94 716 aa13.5□□□□□ -0.25
SATB2-208ENST00000473517 SHPRHQ149N8 1683 aa13.5□□□□□ -0.25
SATB2-208ENST00000473517 AHDC1Q5TGY3 1603 aaPredicted RBP13.48□□□□□ -0.25
SATB2-208ENST00000473517 CADPS2Q86UW7 1296 aa13.47□□□□□ -0.25
SATB2-208ENST00000473517 C8orf37Q96NL8 207 aa13.47□□□□□ -0.25
SATB2-208ENST00000473517 NCOA3Q9Y6Q9 1424 aa13.47□□□□□ -0.25
SATB2-208ENST00000473517 STAG3Q9UJ98 1225 aa13.46□□□□□ -0.25
SATB2-208ENST00000473517 TET3O43151 1660 aa13.46□□□□□ -0.26
SATB2-208ENST00000473517 NWD1Q149M9 1564 aa13.45□□□□□ -0.26
SATB2-208ENST00000473517 CAMSAP2Q08AD1 1489 aa13.44□□□□□ -0.26
SATB2-208ENST00000473517 CCDC141Q6ZP82 1450 aa13.43□□□□□ -0.26
SATB2-208ENST00000473517 ATF3P18847 181 aa13.43□□□□□ -0.26
SATB2-208ENST00000473517 C19orf44Q9H6X5 657 aa13.43□□□□□ -0.26
SATB2-208ENST00000473517 SETD5Q9C0A6 1442 aa13.42□□□□□ -0.26
SATB2-208ENST00000473517 TSPY4P0CV99 314 aa13.42□□□□□ -0.26
SATB2-208ENST00000473517 TSPY10P0CW01 314 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms