RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 NCOA1Q15788 1441 aa11.18□□□□□ -0.62
CKS1B-205ENST00000473344 SETD1BQ9UPS6 1966 aaKnown RBP11.17□□□□□ -0.62
CKS1B-205ENST00000473344 CCNB3Q8WWL7 1395 aa11.17□□□□□ -0.62
CKS1B-205ENST00000473344 GGT6Q6P531 493 aa11.17□□□□□ -0.62
CKS1B-205ENST00000473344 PLEKHH2Q8IVE3 1493 aa11.17□□□□□ -0.62
CKS1B-205ENST00000473344 KIAA1107Q9UPP5 1409 aa11.16□□□□□ -0.62
CKS1B-205ENST00000473344 CAMSAP1Q5T5Y3 1602 aa11.16□□□□□ -0.62
CKS1B-205ENST00000473344 MTUS2Q5JR59 1369 aa11.16□□□□□ -0.62
CKS1B-205ENST00000473344 ATP7AQ04656 1500 aa11.15□□□□□ -0.62
CKS1B-205ENST00000473344 MROH2AA6NES4 1674 aa11.15□□□□□ -0.62
CKS1B-205ENST00000473344 A2MP01023 1474 aa11.15□□□□□ -0.62
CKS1B-205ENST00000473344 NCKAP5LQ9HCH0 1330 aa11.14□□□□□ -0.63
CKS1B-205ENST00000473344 IQSEC2Q5JU85 1478 aa11.14□□□□□ -0.63
CKS1B-205ENST00000473344 ILDR2Q71H61 639 aa11.14□□□□□ -0.63
CKS1B-205ENST00000473344 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
CKS1B-205ENST00000473344 SUPT6HQ7KZ85 1726 aaKnown RBP11.14□□□□□ -0.63
CKS1B-205ENST00000473344 LTBP4Q8N2S1 1624 aa11.13□□□□□ -0.63
CKS1B-205ENST00000473344 SOCS7O14512 581 aa11.13□□□□□ -0.63
CKS1B-205ENST00000473344 PKD2Q13563 968 aa11.13□□□□□ -0.63
CKS1B-205ENST00000473344 ZBTB22O15209 634 aa11.12□□□□□ -0.63
CKS1B-205ENST00000473344 PLXNC1O60486 1568 aa11.11□□□□□ -0.63
CKS1B-205ENST00000473344 INO80Q9ULG1 1556 aaPredicted RBP11.11□□□□□ -0.63
CKS1B-205ENST00000473344 ZNF335Q9H4Z2 1342 aaPredicted RBP11.11□□□□□ -0.63
CKS1B-205ENST00000473344 CLTCQ00610 1675 aaKnown RBP11.11□□□□□ -0.63
CKS1B-205ENST00000473344 UBAP1LF5GYI3 381 aa11.11□□□□□ -0.63
CKS1B-205ENST00000473344 SPATA31D1Q6ZQQ2 1576 aa11.11□□□□□ -0.63
CKS1B-205ENST00000473344 MYO3AQ8NEV4 1616 aa11.1□□□□□ -0.63
CKS1B-205ENST00000473344 PLA2R1Q13018 1463 aa11.1□□□□□ -0.63
CKS1B-205ENST00000473344 PTPRKQ15262 1439 aa11.09□□□□□ -0.63
CKS1B-205ENST00000473344 CEP170BQ9Y4F5 1589 aaPredicted RBP11.09□□□□□ -0.63
CKS1B-205ENST00000473344 ZNF644Q9H582 1327 aaPredicted RBP11.09□□□□□ -0.63
CKS1B-205ENST00000473344 TCOF1Q13428 1488 aaKnown RBP11.07□□□□□ -0.64
CKS1B-205ENST00000473344 EHBP1L1Q8N3D4 1523 aa11.07□□□□□ -0.64
CKS1B-205ENST00000473344 RTEL1-TNFRSF6BF6WH68 1400 aa11.07□□□□□ -0.64
CKS1B-205ENST00000473344 ZNF142P52746 1687 aaPredicted RBP11.07□□□□□ -0.64
CKS1B-205ENST00000473344 ADGBQ8N7X0 1667 aa11.07□□□□□ -0.64
CKS1B-205ENST00000473344 DHX29Q7Z478 1369 aaKnown RBP11.06□□□□□ -0.64
CKS1B-205ENST00000473344 KIF3BO15066 747 aa11.06□□□□□ -0.64
CKS1B-205ENST00000473344 TIAM1Q13009 1591 aa11.06□□□□□ -0.64
CKS1B-205ENST00000473344 A2ML1A8K2U0 1454 aa11.05□□□□□ -0.64
CKS1B-205ENST00000473344 MBD5Q9P267 1494 aa11.05□□□□□ -0.64
CKS1B-205ENST00000473344 WASHC2CQ9Y4E1 1318 aa11.05□□□□□ -0.64
CKS1B-205ENST00000473344 CEP162Q5TB80 1403 aa11.04□□□□□ -0.64
CKS1B-205ENST00000473344 RSPH4AQ5TD94 716 aa11.04□□□□□ -0.64
CKS1B-205ENST00000473344 TNRQ92752 1358 aa11.03□□□□□ -0.64
CKS1B-205ENST00000473344 TSPY4P0CV99 314 aa11.03□□□□□ -0.64
CKS1B-205ENST00000473344 TSPY10P0CW01 314 aa11.03□□□□□ -0.64
CKS1B-205ENST00000473344 FBXO31Q5XUX0 539 aaPredicted RBP11.03□□□□□ -0.64
CKS1B-205ENST00000473344 CCDC141Q6ZP82 1450 aa11.03□□□□□ -0.64
CKS1B-205ENST00000473344 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.65
CKS1B-205ENST00000473344 TOM1O60784 492 aa11.02□□□□□ -0.65
CKS1B-205ENST00000473344 SPDYE6P0CI01 402 aa11.02□□□□□ -0.65
CKS1B-205ENST00000473344 PIP4K2BP78356 416 aa11.02□□□□□ -0.65
CKS1B-205ENST00000473344 SPDYE2Q495Y8 402 aa11.02□□□□□ -0.65
CKS1B-205ENST00000473344 ANKLE2Q86XL3 938 aa11.02□□□□□ -0.65
CKS1B-205ENST00000473344 THEMISQ8N1K5 641 aaPredicted RBP11.02□□□□□ -0.65
CKS1B-205ENST00000473344 KDM5DQ9BY66 1539 aa11.02□□□□□ -0.65
CKS1B-205ENST00000473344 DNMT1P26358 1616 aaKnown RBP11.02□□□□□ -0.65
CKS1B-205ENST00000473344 PIP4P2Q8N4L2 257 aa11.01□□□□□ -0.65
CKS1B-205ENST00000473344 PZPP20742 1482 aa11□□□□□ -0.65
CKS1B-205ENST00000473344 CAMSAP2Q08AD1 1489 aa11□□□□□ -0.65
CKS1B-205ENST00000473344 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
CKS1B-205ENST00000473344 NCOA2Q15596 1464 aa11□□□□□ -0.65
CKS1B-205ENST00000473344 CPS1P31327 1500 aa10.99□□□□□ -0.65
CKS1B-205ENST00000473344 FAM135AQ9P2D6 1515 aa10.99□□□□□ -0.65
CKS1B-205ENST00000473344 PITPNM1O00562 1244 aa10.99□□□□□ -0.65
CKS1B-205ENST00000473344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.99□□□□□ -0.65
CKS1B-205ENST00000473344 MIA2Q96PC5 1412 aa10.98□□□□□ -0.65
CKS1B-205ENST00000473344 NLRP1Q9C000 1473 aa10.98□□□□□ -0.65
CKS1B-205ENST00000473344 SHANK2Q9UPX8 1470 aa10.98□□□□□ -0.65
CKS1B-205ENST00000473344 HSPA1LP34931 641 aa10.97□□□□□ -0.65
CKS1B-205ENST00000473344 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.65
CKS1B-205ENST00000473344 UGGT1Q9NYU2 1555 aa10.97□□□□□ -0.65
CKS1B-205ENST00000473344 POLR1AO95602 1720 aaPredicted RBP10.97□□□□□ -0.65
CKS1B-205ENST00000473344 NEURL4Q96JN8 1562 aa10.95□□□□□ -0.66
CKS1B-205ENST00000473344 NPHP4O75161 1426 aaPredicted RBP10.95□□□□□ -0.66
CKS1B-205ENST00000473344 ARHGEF5Q12774 1597 aa10.94□□□□□ -0.66
CKS1B-205ENST00000473344 MED14O60244 1454 aa10.93□□□□□ -0.66
CKS1B-205ENST00000473344 LRRC9Q6ZRR7 1453 aa10.92□□□□□ -0.66
CKS1B-205ENST00000473344 DEPDC5O75140 1603 aa10.91□□□□□ -0.66
CKS1B-205ENST00000473344 MED1Q15648 1581 aaPredicted RBP10.91□□□□□ -0.66
CKS1B-205ENST00000473344 VWDEQ8N2E2 1590 aa10.91□□□□□ -0.66
CKS1B-205ENST00000473344 ABCC3O15438 1527 aa10.9□□□□□ -0.66
CKS1B-205ENST00000473344 ZC3H13Q5T200 1668 aaKnown RBP10.9□□□□□ -0.66
CKS1B-205ENST00000473344 VPS8Q8N3P4 1428 aa10.9□□□□□ -0.66
CKS1B-205ENST00000473344 IQGAP1P46940 1657 aa10.89□□□□□ -0.67
CKS1B-205ENST00000473344 RNF17Q9BXT8 1623 aaKnown RBP10.89□□□□□ -0.67
CKS1B-205ENST00000473344 HAX1O00165 279 aa10.89□□□□□ -0.67
CKS1B-205ENST00000473344 MAST1Q9Y2H9 1570 aa10.89□□□□□ -0.67
CKS1B-205ENST00000473344 ERVK-7P63135 1459 aa10.88□□□□□ -0.67
CKS1B-205ENST00000473344 EIF2AK4Q9P2K8 1649 aaKnown RBP10.88□□□□□ -0.67
CKS1B-205ENST00000473344 MYOM3Q5VTT5 1437 aa10.88□□□□□ -0.67
CKS1B-205ENST00000473344 TXNDC2Q86VQ3 553 aa10.87□□□□□ -0.67
CKS1B-205ENST00000473344 SPDYE1Q8NFV5 336 aaPredicted RBP10.87□□□□□ -0.67
CKS1B-205ENST00000473344 EID1Q9Y6B2 187 aa10.87□□□□□ -0.67
CKS1B-205ENST00000473344 LRRC7Q96NW7 1537 aa10.86□□□□□ -0.67
CKS1B-205ENST00000473344 DUOX2Q9NRD8 1548 aa10.86□□□□□ -0.67
CKS1B-205ENST00000473344 KANK4Q5T7N3 995 aaPredicted RBP10.86□□□□□ -0.67
CKS1B-205ENST00000473344 STAG3Q9UJ98 1225 aa10.86□□□□□ -0.67
CKS1B-205ENST00000473344 SCAF11Q99590 1463 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms