RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 DAPK1P53355 1430 aa35.02■■■■□ 3.2
PTP4A1-203ENST00000473334 RNF17Q9BXT8 1623 aaKnown RBP35■■■■□ 3.19
PTP4A1-203ENST00000473334 PTPRKQ15262 1439 aa34.99■■■■□ 3.19
PTP4A1-203ENST00000473334 DUOX2Q9NRD8 1548 aa34.99■■■■□ 3.19
PTP4A1-203ENST00000473334 MYO3AQ8NEV4 1616 aa34.93■■■■□ 3.18
PTP4A1-203ENST00000473334 KIF15Q9NS87 1388 aa34.93■■■■□ 3.18
PTP4A1-203ENST00000473334 WASHC2CQ9Y4E1 1318 aa34.92■■■■□ 3.18
PTP4A1-203ENST00000473334 STRCQ7RTU9 1775 aa34.91■■■■□ 3.18
PTP4A1-203ENST00000473334 ZNF142P52746 1687 aaPredicted RBP34.89■■■■□ 3.18
PTP4A1-203ENST00000473334 ZC3H13Q5T200 1668 aaKnown RBP34.89■■■■□ 3.18
PTP4A1-203ENST00000473334 PZPP20742 1482 aa34.88■■■■□ 3.17
PTP4A1-203ENST00000473334 MROH1Q8NDA8 1641 aa34.88■■■■□ 3.17
PTP4A1-203ENST00000473334 ERBINQ96RT1 1412 aa34.87■■■■□ 3.17
PTP4A1-203ENST00000473334 RRP7BPQ9NSQ0 103 aa34.86■■■■□ 3.17
PTP4A1-203ENST00000473334 FAM50AQ14320 339 aaKnown RBP34.85■■■■□ 3.17
PTP4A1-203ENST00000473334 ABCC3O15438 1527 aa34.84■■■■□ 3.17
PTP4A1-203ENST00000473334 ANKRD30AQ9BXX3 1397 aa34.84■■■■□ 3.17
PTP4A1-203ENST00000473334 CEP170BQ9Y4F5 1589 aaPredicted RBP34.83■■■■□ 3.17
PTP4A1-203ENST00000473334 CHIC2Q9UKJ5 165 aa34.82■■■■□ 3.16
PTP4A1-203ENST00000473334 ADGRL2O95490 1459 aa34.8■■■■□ 3.16
PTP4A1-203ENST00000473334 CAMSAP1Q5T5Y3 1602 aa34.79■■■■□ 3.16
PTP4A1-203ENST00000473334 NCOA1Q15788 1441 aa34.79■■■■□ 3.16
PTP4A1-203ENST00000473334 CEP152O94986 1710 aa34.78■■■■□ 3.16
PTP4A1-203ENST00000473334 PRDM15P57071 1507 aaPredicted RBP34.78■■■■□ 3.16
PTP4A1-203ENST00000473334 DMRT2Q9Y5R5 561 aa34.78■■■■□ 3.16
PTP4A1-203ENST00000473334 TNRQ92752 1358 aa34.77■■■■□ 3.16
PTP4A1-203ENST00000473334 FBXO31Q5XUX0 539 aaPredicted RBP34.77■■■■□ 3.16
PTP4A1-203ENST00000473334 DEPDC5O75140 1603 aa34.76■■■■□ 3.15
PTP4A1-203ENST00000473334 A2ML1A8K2U0 1454 aa34.75■■■■□ 3.15
PTP4A1-203ENST00000473334 ILDR1Q86SU0 546 aaPredicted RBP34.72■■■■□ 3.15
PTP4A1-203ENST00000473334 PTPRTO14522 1441 aa34.72■■■■□ 3.15
PTP4A1-203ENST00000473334 PPARGC1BQ86YN6 1023 aaKnown RBP34.71■■■■□ 3.15
PTP4A1-203ENST00000473334 PLA2R1Q13018 1463 aa34.7■■■■□ 3.15
PTP4A1-203ENST00000473334 SPATA31D1Q6ZQQ2 1576 aa34.67■■■■□ 3.14
PTP4A1-203ENST00000473334 NLRP1Q9C000 1473 aa34.65■■■■□ 3.14
PTP4A1-203ENST00000473334 ERVK-7P63135 1459 aa34.64■■■■□ 3.14
PTP4A1-203ENST00000473334 KANK1Q14678 1352 aa34.63■■■■□ 3.13
PTP4A1-203ENST00000473334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.63■■■■□ 3.13
PTP4A1-203ENST00000473334 ARHGAP31Q2M1Z3 1444 aa34.61■■■■□ 3.13
PTP4A1-203ENST00000473334 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.61■■■■□ 3.139e-9■□□□□ 9.4
PTP4A1-203ENST00000473334 VWDEQ8N2E2 1590 aa34.6■■■■□ 3.13
PTP4A1-203ENST00000473334 NCKAP5LQ9HCH0 1330 aa34.59■■■■□ 3.13
PTP4A1-203ENST00000473334 ANKRD50Q9ULJ7 1429 aa34.59■■■■□ 3.13
PTP4A1-203ENST00000473334 CFAP65Q6ZU64 1925 aaKnown RBP34.59■■■■□ 3.13
PTP4A1-203ENST00000473334 PKD2Q13563 968 aa34.58■■■■□ 3.13
PTP4A1-203ENST00000473334 LMTK2Q8IWU2 1503 aa34.57■■■■□ 3.12
PTP4A1-203ENST00000473334 UGGT1Q9NYU2 1555 aa34.56■■■■□ 3.12
PTP4A1-203ENST00000473334 ROCK1Q13464 1354 aa34.55■■■■□ 3.12
PTP4A1-203ENST00000473334 FBXO41Q8TF61 875 aa34.55■■■■□ 3.12
PTP4A1-203ENST00000473334 POLR1AO95602 1720 aaPredicted RBP34.52■■■■□ 3.12
PTP4A1-203ENST00000473334 CERKQ8TCT0 537 aa34.52■■■■□ 3.12
PTP4A1-203ENST00000473334 THEMISQ8N1K5 641 aaPredicted RBP34.49■■■■□ 3.11
PTP4A1-203ENST00000473334 RRBP1Q9P2E9 1410 aaKnown RBP34.47■■■■□ 3.11
PTP4A1-203ENST00000473334 EFCAB6Q5THR3 1501 aa34.47■■■■□ 3.11
PTP4A1-203ENST00000473334 ITGAEP38570 1179 aa34.46■■■■□ 3.11
PTP4A1-203ENST00000473334 UNC13BO14795 1591 aa34.45■■■■□ 3.1
PTP4A1-203ENST00000473334 NEURL4Q96JN8 1562 aa34.44■■■■□ 3.1
PTP4A1-203ENST00000473334 LTBP4Q8N2S1 1624 aa34.43■■■■□ 3.1
PTP4A1-203ENST00000473334 UBR1Q8IWV7 1749 aa34.43■■■■□ 3.1
PTP4A1-203ENST00000473334 ANKLE2Q86XL3 938 aa34.39■■■■□ 3.1
PTP4A1-203ENST00000473334 TET3O43151 1660 aa34.38■■■■□ 3.09
PTP4A1-203ENST00000473334 GCC2Q8IWJ2 1684 aa34.35■■■■□ 3.09
PTP4A1-203ENST00000473334 RPRD2Q5VT52 1461 aaKnown RBP34.34■■■■□ 3.09
PTP4A1-203ENST00000473334 PIK3C2BO00750 1634 aa34.34■■■■□ 3.09
PTP4A1-203ENST00000473334 SYNMO15061 1565 aa34.34■■■■□ 3.09
PTP4A1-203ENST00000473334 NOS1P29475 1434 aa34.33■■■■□ 3.09
PTP4A1-203ENST00000473334 MED14O60244 1454 aa34.33■■■■□ 3.09
PTP4A1-203ENST00000473334 ZNF335Q9H4Z2 1342 aaPredicted RBP34.32■■■■□ 3.09
PTP4A1-203ENST00000473334 IQGAP3Q86VI3 1631 aa34.31■■■■□ 3.08
PTP4A1-203ENST00000473334 KDM5AP29375 1690 aaKnown RBP34.3■■■■□ 3.08
PTP4A1-203ENST00000473334 NPHP4O75161 1426 aaPredicted RBP34.3■■■■□ 3.08
PTP4A1-203ENST00000473334 IQGAP1P46940 1657 aa34.28■■■■□ 3.08
PTP4A1-203ENST00000473334 IQSEC2Q5JU85 1478 aa34.27■■■■□ 3.08
PTP4A1-203ENST00000473334 SLIT1O75093 1534 aa34.27■■■■□ 3.08
PTP4A1-203ENST00000473334 ARHGAP23Q9P227 1491 aa34.26■■■■□ 3.07
PTP4A1-203ENST00000473334 IDI1Q13907 227 aa34.24■■■■□ 3.07
PTP4A1-203ENST00000473334 E9PCH4 1651 aa34.23■■■■□ 3.07
PTP4A1-203ENST00000473334 SCAF11Q99590 1463 aaKnown RBP34.22■■■■□ 3.07
PTP4A1-203ENST00000473334 STAG3Q9UJ98 1225 aa34.22■■■■□ 3.07
PTP4A1-203ENST00000473334 NUP155O75694 1391 aa34.21■■■■□ 3.07
PTP4A1-203ENST00000473334 ADGRB3O60242 1522 aa34.2■■■■□ 3.07
PTP4A1-203ENST00000473334 SLC52A1Q9NWF4 448 aa34.2■■■■□ 3.07
PTP4A1-203ENST00000473334 NAIPQ13075 1403 aa34.17■■■■□ 3.06
PTP4A1-203ENST00000473334 TMEM2Q9UHN6 1383 aa34.17■■■■□ 3.06
PTP4A1-203ENST00000473334 TXNDC2Q86VQ3 553 aa34.15■■■■□ 3.06
PTP4A1-203ENST00000473334 CPS1P31327 1500 aa34.14■■■■□ 3.06
PTP4A1-203ENST00000473334 LTKP29376 864 aa34.14■■■■□ 3.06
PTP4A1-203ENST00000473334 EID1Q9Y6B2 187 aa34.14■■■■□ 3.06
PTP4A1-203ENST00000473334 HFM1A2PYH4 1435 aa34.09■■■■□ 3.05
PTP4A1-203ENST00000473334 MYO5BQ9ULV0 1848 aa34.07■■■■□ 3.04
PTP4A1-203ENST00000473334 TMEM131LA2VDJ0 1609 aa34.05■■■■□ 3.04
PTP4A1-203ENST00000473334 STRCP1A6NGW2 1772 aa34.02■■■■□ 3.04
PTP4A1-203ENST00000473334 SPHKAPQ2M3C7 1700 aa34.01■■■■□ 3.03
PTP4A1-203ENST00000473334 ZFYVE9O95405 1425 aa33.96■■■■□ 3.03
PTP4A1-203ENST00000473334 UBAP1LF5GYI3 381 aa33.94■■■■□ 3.02
PTP4A1-203ENST00000473334 RIMS2Q9UQ26 1411 aa33.94■■■■□ 3.02
PTP4A1-203ENST00000473334 CHGAP10645 457 aaKnown RBP33.93■■■■□ 3.02
PTP4A1-203ENST00000473334 LRRC7Q96NW7 1537 aa33.9■■■■□ 3.02
PTP4A1-203ENST00000473334 HDGFP51858 240 aaKnown RBP33.9■■■■□ 3.02
PTP4A1-203ENST00000473334 TRIM52Q96A61 297 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms