RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 SND1Q7KZF4 910 aaKnown RBP eCLIP9.42□□□□□ -0.9
NUP35-208ENST00000472844 CD44P16070 742 aaKnown RBP9.41□□□□□ -0.9
NUP35-208ENST00000472844 TEX2Q8IWB9 1127 aa9.41□□□□□ -0.9
NUP35-208ENST00000472844 OTUD5Q96G74 571 aa9.41□□□□□ -0.9
NUP35-208ENST00000472844 PCMTD1Q96MG8 357 aaPredicted RBP9.41□□□□□ -0.9
NUP35-208ENST00000472844 SGIP1Q9BQI5 828 aa9.41□□□□□ -0.9
NUP35-208ENST00000472844 A0A0U1RQG5 324 aaPredicted RBP9.4□□□□□ -0.9
NUP35-208ENST00000472844 RBM47A0AV96 593 aaKnown RBP9.4□□□□□ -0.9
NUP35-208ENST00000472844 ANKRD62A6NC57 917 aa9.4□□□□□ -0.9
NUP35-208ENST00000472844 SREK1Q8WXA9 508 aaKnown RBP9.39□□□□□ -0.91
NUP35-208ENST00000472844 CREBZFQ9NS37 354 aa9.39□□□□□ -0.91
NUP35-208ENST00000472844 LOC102724159A0A0B4J2E5 919 aa9.38□□□□□ -0.91
NUP35-208ENST00000472844 PWP2Q15269 919 aaKnown RBP9.38□□□□□ -0.91
NUP35-208ENST00000472844 TSR1Q2NL82 804 aaKnown RBP9.38□□□□□ -0.91
NUP35-208ENST00000472844 EXOC8Q8IYI6 725 aa9.38□□□□□ -0.91
NUP35-208ENST00000472844 POM121Q96HA1 1249 aa9.38□□□□□ -0.91
NUP35-208ENST00000472844 PCDH10Q9P2E7 1040 aa9.38□□□□□ -0.91
NUP35-208ENST00000472844 RIPOR2Q9Y4F9 1068 aa9.38□□□□□ -0.91
NUP35-208ENST00000472844 CLCN6P51797 869 aa9.37□□□□□ -0.91
NUP35-208ENST00000472844 IVNS1ABPQ9Y6Y0 642 aa9.37□□□□□ -0.91
NUP35-208ENST00000472844 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.36□□□□□ -0.91
NUP35-208ENST00000472844 NAP1L5Q96NT1 182 aaPredicted RBP9.36□□□□□ -0.91
NUP35-208ENST00000472844 USTQ9Y2C2 406 aa9.36□□□□□ -0.91
NUP35-208ENST00000472844 ZC3H4Q9UPT8 1303 aaKnown RBP9.35□□□□□ -0.91
NUP35-208ENST00000472844 MARCH6O60337 910 aa9.35□□□□□ -0.91
NUP35-208ENST00000472844 RBM26Q5T8P6 1007 aaKnown RBP9.35□□□□□ -0.91
NUP35-208ENST00000472844 CCDC136Q96JN2 1154 aa9.35□□□□□ -0.91
NUP35-208ENST00000472844 DCBLD2Q96PD2 775 aa9.35□□□□□ -0.91
NUP35-208ENST00000472844 PLCD4Q9BRC7 762 aa9.35□□□□□ -0.91
NUP35-208ENST00000472844 MYH16Q9H6N6 1097 aa9.35□□□□□ -0.91
NUP35-208ENST00000472844 THOC2Q8NI27 1593 aaKnown RBP9.34□□□□□ -0.91
NUP35-208ENST00000472844 PTMSP20962 102 aa9.34□□□□□ -0.91
NUP35-208ENST00000472844 HIRIP3Q9BW71 556 aaPredicted RBP9.34□□□□□ -0.91
NUP35-208ENST00000472844 MRRFQ96E11 262 aaKnown RBP9.33□□□□□ -0.92
NUP35-208ENST00000472844 C8orf37Q96NL8 207 aa9.33□□□□□ -0.92
NUP35-208ENST00000472844 ZNF330Q9Y3S2 320 aaPredicted RBP9.33□□□□□ -0.92
NUP35-208ENST00000472844 HSP90AB4PQ58FF6 505 aa9.32□□□□□ -0.92
NUP35-208ENST00000472844 MAFGO15525 162 aa9.31□□□□□ -0.92
NUP35-208ENST00000472844 ZEB1P37275 1124 aaPredicted RBP9.31□□□□□ -0.92
NUP35-208ENST00000472844 KIAA1522Q9P206 1035 aaPredicted RBP9.31□□□□□ -0.92
NUP35-208ENST00000472844 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
NUP35-208ENST00000472844 CSB-PGBD3P0DP91 1061 aa9.3□□□□□ -0.92
NUP35-208ENST00000472844 UBXN4Q92575 508 aa9.3□□□□□ -0.92
NUP35-208ENST00000472844 ANAPC15P60006 121 aa9.29□□□□□ -0.92
NUP35-208ENST00000472844 GORABQ5T7V8 394 aa9.29□□□□□ -0.92
NUP35-208ENST00000472844 SCRIBQ14160 1630 aa9.29□□□□□ -0.92
NUP35-208ENST00000472844 RIMBP3CA6NJZ7 1639 aa9.28□□□□□ -0.92
NUP35-208ENST00000472844 RIMBP3BA6NNM3 1639 aa9.28□□□□□ -0.92
NUP35-208ENST00000472844 RIMBP3Q9UFD9 1639 aa9.28□□□□□ -0.92
NUP35-208ENST00000472844 TCF3P15923 654 aa9.28□□□□□ -0.92
NUP35-208ENST00000472844 DCAF8Q5TAQ9 597 aa9.28□□□□□ -0.92
NUP35-208ENST00000472844 POTEB2H3BUK9 544 aa9.27□□□□□ -0.93
NUP35-208ENST00000472844 TPD52L2O43399 206 aaKnown RBP9.27□□□□□ -0.93
NUP35-208ENST00000472844 ZNF579Q8NAF0 562 aaKnown RBP9.27□□□□□ -0.93
NUP35-208ENST00000472844 ZRANB1Q9UGI0 708 aa9.27□□□□□ -0.93
NUP35-208ENST00000472844 PPME1Q9Y570 386 aa9.27□□□□□ -0.93
NUP35-208ENST00000472844 BAZ1AQ9NRL2 1556 aaPredicted RBP9.27□□□□□ -0.93
NUP35-208ENST00000472844 PARP9Q8IXQ6 854 aa9.26□□□□□ -0.93
NUP35-208ENST00000472844 PPP1R1BQ9UD71 204 aaPredicted RBP9.26□□□□□ -0.93
NUP35-208ENST00000472844 COG6Q9Y2V7 657 aa9.26□□□□□ -0.93
NUP35-208ENST00000472844 NESP48681 1621 aa9.26□□□□□ -0.93
NUP35-208ENST00000472844 SIRT1Q96EB6 747 aa9.25□□□□□ -0.93
NUP35-208ENST00000472844 AMHR2Q16671 573 aa9.24□□□□□ -0.93
NUP35-208ENST00000472844 PBXIP1Q96AQ6 731 aa9.24□□□□□ -0.93
NUP35-208ENST00000472844 CALR3Q96L12 384 aaKnown RBP9.24□□□□□ -0.93
NUP35-208ENST00000472844 MNX1P50219 401 aaPredicted RBP9.23□□□□□ -0.93
NUP35-208ENST00000472844 MICAL1Q8TDZ2 1067 aa9.23□□□□□ -0.93
NUP35-208ENST00000472844 RBM27Q9P2N5 1060 aaKnown RBP9.23□□□□□ -0.93
NUP35-208ENST00000472844 SF3A1Q15459 793 aaKnown RBP9.22□□□□□ -0.93
NUP35-208ENST00000472844 MINK1Q8N4C8 1332 aaPredicted RBP9.22□□□□□ -0.93
NUP35-208ENST00000472844 SMARCA2P51531 1590 aa9.21□□□□□ -0.93
NUP35-208ENST00000472844 TBC1D12O60347 775 aa9.21□□□□□ -0.94
NUP35-208ENST00000472844 CENPBP07199 599 aaPredicted RBP9.21□□□□□ -0.94
NUP35-208ENST00000472844 ERCC3P19447 782 aa9.21□□□□□ -0.94
NUP35-208ENST00000472844 ZC3H6P61129 1189 aaKnown RBP9.21□□□□□ -0.94
NUP35-208ENST00000472844 SKIV2LQ15477 1246 aaKnown RBP9.2□□□□□ -0.94
NUP35-208ENST00000472844 TXNDC2Q86VQ3 553 aa9.2□□□□□ -0.94
NUP35-208ENST00000472844 PRDM10Q9NQV6 1147 aa9.2□□□□□ -0.94
NUP35-208ENST00000472844 SUGT1Q9Y2Z0 365 aa9.2□□□□□ -0.94
NUP35-208ENST00000472844 SPDYE5A6NIY4 337 aa9.19□□□□□ -0.94
NUP35-208ENST00000472844 HMGB1P1B2RPK0 211 aaPredicted RBP9.19□□□□□ -0.94
NUP35-208ENST00000472844 PAK3O75914 559 aaPredicted RBP9.19□□□□□ -0.94
NUP35-208ENST00000472844 CHRM1P11229 460 aaPredicted RBP9.18□□□□□ -0.94
NUP35-208ENST00000472844 MLLT3P42568 568 aaPredicted RBP9.18□□□□□ -0.94
NUP35-208ENST00000472844 WWC1Q8IX03 1113 aa9.18□□□□□ -0.94
NUP35-208ENST00000472844 GPATCH11Q8N954 259 aa9.18□□□□□ -0.94
NUP35-208ENST00000472844 CCDC102AQ96A19 550 aa9.18□□□□□ -0.94
NUP35-208ENST00000472844 KIF21AQ7Z4S6 1674 aa9.17□□□□□ -0.94
NUP35-208ENST00000472844 NUBP1P53384 320 aa9.17□□□□□ -0.94
NUP35-208ENST00000472844 SH3D19Q5HYK7 790 aa9.17□□□□□ -0.94
NUP35-208ENST00000472844 SPTY2D1Q68D10 685 aaPredicted RBP9.17□□□□□ -0.94
NUP35-208ENST00000472844 GIMAP6Q6P9H5 292 aa9.17□□□□□ -0.94
NUP35-208ENST00000472844 ZNF16P17020 682 aaPredicted RBP9.16□□□□□ -0.94
NUP35-208ENST00000472844 DNAJC2Q99543 621 aaKnown RBP9.16□□□□□ -0.94
NUP35-208ENST00000472844 VRTNQ9H8Y1 702 aa9.16□□□□□ -0.94
NUP35-208ENST00000472844 GALR2O43603 387 aaPredicted RBP9.15□□□□□ -0.94
NUP35-208ENST00000472844 RAB11FIP3O75154 756 aa9.15□□□□□ -0.94
NUP35-208ENST00000472844 LCE2DQ5TA82 110 aaPredicted RBP9.15□□□□□ -0.94
NUP35-208ENST00000472844 CCDC181Q5TID7 509 aa9.15□□□□□ -0.94
NUP35-208ENST00000472844 CARNS1A5YM72 827 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms